RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W FAR11P53917 953 aa8.48□□□□□ -1.05
NUP53YMR153W MMR1Q06324 491 aa8.48□□□□□ -1.05
NUP53YMR153W OSW2Q12202 724 aa8.48□□□□□ -1.05
NUP53YMR153W ADE4P04046 510 aaKnown RBP8.47□□□□□ -1.05
NUP53YMR153W CKA2P19454 339 aa8.47□□□□□ -1.05
NUP53YMR153W RPC53P25441 422 aa8.47□□□□□ -1.05
NUP53YMR153W URA1P28272 314 aaPredicted RBP8.47□□□□□ -1.05
NUP53YMR153W TMT1P32643 299 aa8.47□□□□□ -1.05
NUP53YMR153W COT1P32798 439 aa8.47□□□□□ -1.05
NUP53YMR153W MAL33P38157 468 aa8.47□□□□□ -1.05
NUP53YMR153W UBX7P38349 436 aa8.47□□□□□ -1.05
NUP53YMR153W YHL026CP38740 315 aa8.47□□□□□ -1.05
NUP53YMR153W BUD16P39988 312 aa8.47□□□□□ -1.05
NUP53YMR153W FAF1P40546 346 aaPredicted RBP8.47□□□□□ -1.05
NUP53YMR153W GUP1P53154 560 aa8.47□□□□□ -1.05
NUP53YMR153W YNL146WP53906 100 aa8.47□□□□□ -1.05
NUP53YMR153W IES4Q08561 116 aa8.47□□□□□ -1.05
NUP53YMR153W HIS4P00815 799 aaKnown RBP8.46□□□□□ -1.05
NUP53YMR153W ADK2P26364 225 aa8.46□□□□□ -1.05
NUP53YMR153W CSE2P33308 149 aa8.46□□□□□ -1.05
NUP53YMR153W VID24P38263 362 aa8.46□□□□□ -1.05
NUP53YMR153W YDR090CQ03193 310 aa8.46□□□□□ -1.05
NUP53YMR153W SPO71Q03868 1245 aa8.46□□□□□ -1.05
NUP53YMR153W DOT1Q04089 582 aaKnown RBP8.46□□□□□ -1.05
NUP53YMR153W SSD1P24276 1250 aaKnown RBP RIP-Chip data8.46□□□□□ -1.06not detected
NUP53YMR153W RDS1P25611 832 aa8.46□□□□□ -1.06
NUP53YMR153W DPH2P32461 534 aa8.46□□□□□ -1.06
NUP53YMR153W VPS35P34110 944 aa8.46□□□□□ -1.06
NUP53YMR153W YAP1801P38856 637 aa8.46□□□□□ -1.06
NUP53YMR153W NUP82P40368 713 aa8.46□□□□□ -1.06
NUP53YMR153W OYE3P41816 400 aaPredicted RBP8.46□□□□□ -1.06
NUP53YMR153W CUL3P53202 744 aa8.46□□□□□ -1.06
NUP53YMR153W TOF1P53840 1238 aa8.46□□□□□ -1.06
NUP53YMR153W ARK1P53974 638 aa8.46□□□□□ -1.06
NUP53YMR153W BIK1P11709 440 aa8.45□□□□□ -1.06
NUP53YMR153W POL3P15436 1097 aa8.45□□□□□ -1.06
NUP53YMR153W PGM2P37012 569 aaKnown RBP8.45□□□□□ -1.06
NUP53YMR153W PPS1P38148 807 aa8.45□□□□□ -1.06
NUP53YMR153W MNP1P53163 194 aaPredicted RBP8.45□□□□□ -1.06
NUP53YMR153W YNL034WP53963 612 aa8.45□□□□□ -1.06
NUP53YMR153W YNL018CP53976 612 aa8.45□□□□□ -1.06
NUP53YMR153W COG8Q04632 607 aa8.45□□□□□ -1.06
NUP53YMR153W PSR2Q07949 397 aa8.45□□□□□ -1.06
NUP53YMR153W GLN3P18494 730 aa8.44□□□□□ -1.06
NUP53YMR153W SYN8P31377 255 aa8.44□□□□□ -1.06
NUP53YMR153W SKG6P32900 734 aaPredicted RBP8.44□□□□□ -1.06
NUP53YMR153W MRPL7P36519 292 aa8.44□□□□□ -1.06
NUP53YMR153W DAK2P43550 591 aa8.44□□□□□ -1.06
NUP53YMR153W CAF130P53280 1122 aaPredicted RBP8.44□□□□□ -1.06
NUP53YMR153W DAP1Q12091 152 aa8.44□□□□□ -1.06
NUP53YMR153W YOR022CQ12204 715 aa8.44□□□□□ -1.06
NUP53YMR153W ZPS1Q12512 249 aa8.44□□□□□ -1.06
NUP53YMR153W TOM70P07213 617 aaKnown RBP8.43□□□□□ -1.06
NUP53YMR153W MCM3P24279 971 aaKnown RBP8.43□□□□□ -1.06
NUP53YMR153W YSC83P32792 385 aa8.43□□□□□ -1.06
NUP53YMR153W XDJ1P39102 459 aa8.43□□□□□ -1.06
NUP53YMR153W THI6P41835 540 aa8.43□□□□□ -1.06
NUP53YMR153W LCD1Q04377 747 aa8.43□□□□□ -1.06
NUP53YMR153W SCP160P06105 1222 aaKnown RBP RIP-Chip data8.42□□□□□ -1.06not detected
NUP53YMR153W ISY1P21374 235 aaPredicted RBP8.42□□□□□ -1.06
NUP53YMR153W SEC21P32074 935 aaKnown RBP8.42□□□□□ -1.06
NUP53YMR153W CCL1P37366 393 aa8.42□□□□□ -1.06
NUP53YMR153W RDH54P38086 958 aa8.42□□□□□ -1.06
NUP53YMR153W UBP13P38187 747 aa8.42□□□□□ -1.06
NUP53YMR153W APM2P38700 605 aa8.42□□□□□ -1.06
NUP53YMR153W YHR202WP38887 602 aa8.42□□□□□ -1.06
NUP53YMR153W YFL052WP43551 465 aa8.42□□□□□ -1.06
NUP53YMR153W TAM41P53230 385 aa8.42□□□□□ -1.06
NUP53YMR153W VTC3Q02725 835 aa8.42□□□□□ -1.06
NUP53YMR153W CWC21Q03375 135 aaKnown RBP8.42□□□□□ -1.06
NUP53YMR153W FOB1O13329 566 aa8.41□□□□□ -1.06
NUP53YMR153W COX4P04037 155 aa8.41□□□□□ -1.06
NUP53YMR153W TAF13P11747 167 aa8.41□□□□□ -1.06
NUP53YMR153W RSA4P25382 515 aaKnown RBP8.41□□□□□ -1.06
NUP53YMR153W NAM7P30771 971 aaKnown RBP8.41□□□□□ -1.06
NUP53YMR153W HEL1P36113 551 aa8.41□□□□□ -1.06
NUP53YMR153W MRX3P38172 270 aa8.41□□□□□ -1.06
NUP53YMR153W RFS1P38234 210 aaKnown RBP8.41□□□□□ -1.06
NUP53YMR153W SCD6P45978 349 aaKnown RBP RIP-Chip data8.41□□□□□ -1.06 RIP-Chip
NUP53YMR153W ENV11P53246 860 aa8.41□□□□□ -1.06
NUP53YMR153W SEC5P89102 971 aa8.41□□□□□ -1.06
NUP53YMR153W SPP1Q03012 353 aa8.41□□□□□ -1.06
NUP53YMR153W TRS130Q03660 1102 aa8.41□□□□□ -1.06
NUP53YMR153W ECM7Q06200 448 aa8.41□□□□□ -1.06
NUP53YMR153W YDL057WQ07379 328 aa8.41□□□□□ -1.06
NUP53YMR153W SHS1Q07657 551 aa8.41□□□□□ -1.06
NUP53YMR153W ESC8Q08119 714 aa8.41□□□□□ -1.06
NUP53YMR153W PKH2Q12236 1081 aaKnown RBP8.41□□□□□ -1.06
NUP53YMR153W PCK1P10963 549 aa8.4□□□□□ -1.06
NUP53YMR153W CDC15P27636 974 aa8.4□□□□□ -1.06
NUP53YMR153W RPT1P33299 467 aaKnown RBP8.4□□□□□ -1.06
NUP53YMR153W MNR2P35724 969 aa8.4□□□□□ -1.06
NUP53YMR153W YFL034WP43564 1073 aa8.4□□□□□ -1.06
NUP53YMR153W VTC2P43585 828 aa8.4□□□□□ -1.06
NUP53YMR153W ALG11P53954 548 aaKnown RBP8.4□□□□□ -1.06
NUP53YMR153W CIT2P08679 460 aa8.39□□□□□ -1.07
NUP53YMR153W BMH1P29311 267 aaKnown RBP8.39□□□□□ -1.07
NUP53YMR153W GCS1P35197 352 aa8.39□□□□□ -1.07
NUP53YMR153W STB5P38699 743 aa8.39□□□□□ -1.07
NUP53YMR153W MMF1P40185 145 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 82.1 ms