RNA–Protein interactions for RNA: YMR135C

GID8, Transcript of Subunit of GID Complex, binds strongly to central component Vid30p, yeastyeast

Gene GID8, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GID8YMR135C RCK2P38623 610 aa9.51□□□□□ -0.89
GID8YMR135C VPS45P38932 577 aa9.51□□□□□ -0.89
GID8YMR135C MRX1P40050 688 aa9.51□□□□□ -0.89
GID8YMR135C MFM1Q02783 413 aa9.51□□□□□ -0.89
GID8YMR135C YLH47Q06493 454 aa9.51□□□□□ -0.89
GID8YMR135C MED1Q12321 566 aa9.51□□□□□ -0.89
GID8YMR135C ZRT2Q12436 422 aa9.51□□□□□ -0.89
GID8YMR135C TRP2P00899 507 aaKnown RBP9.5□□□□□ -0.89
GID8YMR135C PRP9P19736 530 aaKnown RBP9.5□□□□□ -0.89
GID8YMR135C RPS7AP26786 190 aaKnown RBP9.5□□□□□ -0.89
GID8YMR135C SEC20P28791 383 aa9.5□□□□□ -0.89
GID8YMR135C PSE1P32337 1089 aaKnown RBP9.5□□□□□ -0.89
GID8YMR135C UBC6P33296 250 aaPredicted RBP9.5□□□□□ -0.89
GID8YMR135C ISW1P38144 1129 aa9.5□□□□□ -0.89
GID8YMR135C TPS3P38426 1054 aaKnown RBP9.5□□□□□ -0.89
GID8YMR135C SIP3P38717 1229 aa9.5□□□□□ -0.89
GID8YMR135C PIH1P38768 344 aa9.5□□□□□ -0.89
GID8YMR135C PAN5P38787 379 aa9.5□□□□□ -0.89
GID8YMR135C HXT8P40886 569 aa9.5□□□□□ -0.89
GID8YMR135C RPC17P47076 161 aa9.5□□□□□ -0.89
GID8YMR135C SEC5P89102 971 aa9.5□□□□□ -0.89
GID8YMR135C EEB1Q02891 456 aa9.5□□□□□ -0.89
GID8YMR135C UTP14Q04500 899 aaKnown RBP9.5□□□□□ -0.89
GID8YMR135C SUE1Q06524 206 aa9.5□□□□□ -0.89
GID8YMR135C TSR1Q07381 788 aaKnown RBP9.5□□□□□ -0.89
GID8YMR135C ACK1Q07622 623 aaPredicted RBP9.5□□□□□ -0.89
GID8YMR135C PMR1P13586 950 aa9.5□□□□□ -0.89
GID8YMR135C PFK1P16861 987 aaKnown RBP9.5□□□□□ -0.89
GID8YMR135C SWE1P32944 819 aa9.5□□□□□ -0.89
GID8YMR135C OAF3P36023 863 aa9.5□□□□□ -0.89
GID8YMR135C YFR006WP43590 535 aa9.5□□□□□ -0.89
GID8YMR135C SYH1Q02875 849 aaKnown RBP9.5□□□□□ -0.89
GID8YMR135C FLO11P08640 1367 aa9.49□□□□□ -0.89
GID8YMR135C RNA1P11745 407 aaKnown RBP9.49□□□□□ -0.89
GID8YMR135C SAM2P19358 384 aaKnown RBP9.49□□□□□ -0.89
GID8YMR135C TIF11P38912 153 aaKnown RBP9.49□□□□□ -0.89
GID8YMR135C CCT2P39076 527 aaKnown RBP9.49□□□□□ -0.89
GID8YMR135C PGA2P53903 129 aa9.49□□□□□ -0.89
GID8YMR135C YLR297WQ05899 129 aa9.49□□□□□ -0.89
GID8YMR135C GSC2P40989 1895 aa9.48□□□□□ -0.89
GID8YMR135C ILV1P00927 576 aaKnown RBP9.48□□□□□ -0.89
GID8YMR135C SCP160P06105 1222 aaKnown RBP RIP-Chip data9.48□□□□□ -0.89not detected
GID8YMR135C NAM7P30771 971 aaKnown RBP9.48□□□□□ -0.89
GID8YMR135C PDB1P32473 366 aaKnown RBP9.48□□□□□ -0.89
GID8YMR135C YKU70P32807 602 aa9.48□□□□□ -0.89
GID8YMR135C SUL1P38359 859 aa9.48□□□□□ -0.89
GID8YMR135C FIG4P42837 879 aa9.48□□□□□ -0.89
GID8YMR135C BRE2P43132 505 aa9.48□□□□□ -0.89
GID8YMR135C VID30P53076 958 aa9.48□□□□□ -0.89
GID8YMR135C ENV11P53246 860 aa9.48□□□□□ -0.89
GID8YMR135C YPL277CQ08989 487 aa9.48□□□□□ -0.89
GID8YMR135C SPO21Q12411 609 aa9.48□□□□□ -0.89
GID8YMR135C ARD1P07347 238 aaPredicted RBP9.47□□□□□ -0.89
GID8YMR135C RPB2P08518 1224 aaKnown RBP9.47□□□□□ -0.89
GID8YMR135C YCR051WP25631 222 aa9.47□□□□□ -0.89
GID8YMR135C LOS1P33418 1100 aaPredicted RBP9.47□□□□□ -0.89
GID8YMR135C BLI1P35727 113 aa9.47□□□□□ -0.89
GID8YMR135C NMD5P46970 1048 aa9.47□□□□□ -0.89
GID8YMR135C RIM8P53179 542 aa9.47□□□□□ -0.89
GID8YMR135C LSB1P53281 241 aa9.47□□□□□ -0.89
GID8YMR135C ADA2Q02336 434 aa9.47□□□□□ -0.89
GID8YMR135C YMR187CQ03236 431 aa9.47□□□□□ -0.89
GID8YMR135C USA1Q03714 838 aa9.47□□□□□ -0.89
GID8YMR135C YMR018WQ04364 514 aa9.47□□□□□ -0.89
GID8YMR135C TDA9Q04545 1251 aa9.47□□□□□ -0.89
GID8YMR135C PIG1Q06216 648 aa9.47□□□□□ -0.89
GID8YMR135C CSR1Q06705 408 aaKnown RBP9.47□□□□□ -0.89
GID8YMR135C KIN1P13185 1064 aa9.46□□□□□ -0.9
GID8YMR135C MRF1P30775 413 aaPredicted RBP9.46□□□□□ -0.9
GID8YMR135C MMS21P38632 267 aa9.46□□□□□ -0.9
GID8YMR135C LCP5P40079 357 aaPredicted RBP9.46□□□□□ -0.9
GID8YMR135C SMX2P40204 77 aaKnown RBP9.46□□□□□ -0.9
GID8YMR135C SAP185P40856 1058 aa9.46□□□□□ -0.9
GID8YMR135C ESBP6P53918 673 aa9.46□□□□□ -0.9
GID8YMR135C NCS2P53923 493 aaPredicted RBP9.46□□□□□ -0.9
GID8YMR135C YML119WQ03208 357 aa9.46□□□□□ -0.9
GID8YMR135C GIR2Q03768 265 aaPredicted RBP9.46□□□□□ -0.9
GID8YMR135C YDL124WQ07551 312 aaKnown RBP9.46□□□□□ -0.9
GID8YMR135C OXR1Q08952 273 aa9.46□□□□□ -0.9
GID8YMR135C AIM41Q12032 185 aa9.46□□□□□ -0.9
GID8YMR135C GRX6Q12438 231 aa9.46□□□□□ -0.9
GID8YMR135C ARG1P22768 420 aa9.45□□□□□ -0.9
GID8YMR135C ILV6P25605 309 aaKnown RBP9.45□□□□□ -0.9
GID8YMR135C YEL1P34225 687 aa9.45□□□□□ -0.9
GID8YMR135C SWH1P35845 1188 aa9.45□□□□□ -0.9
GID8YMR135C YKL023WP36103 277 aaKnown RBP9.45□□□□□ -0.9
GID8YMR135C NDT80P38830 627 aa9.45□□□□□ -0.9
GID8YMR135C GTT3P39996 337 aa9.45□□□□□ -0.9
GID8YMR135C ORC4P54791 529 aa9.45□□□□□ -0.9
GID8YMR135C OYE2Q03558 400 aaKnown RBP9.45□□□□□ -0.9
GID8YMR135C TAF9Q05027 157 aa9.45□□□□□ -0.9
GID8YMR135C UTP4Q06679 776 aaKnown RBP9.45□□□□□ -0.9
GID8YMR135C ADH4P10127 382 aa9.44□□□□□ -0.9
GID8YMR135C PCK1P10963 549 aa9.44□□□□□ -0.9
GID8YMR135C GAL11P19659 1081 aa9.44□□□□□ -0.9
GID8YMR135C PWP2P25635 923 aaKnown RBP9.44□□□□□ -0.9
GID8YMR135C YKL050CP35736 922 aa9.44□□□□□ -0.9
GID8YMR135C HEL1P36113 551 aa9.44□□□□□ -0.9
GID8YMR135C ERT1P38140 529 aa9.44□□□□□ -0.9
GID8YMR135C CST26P38226 397 aa9.44□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms