RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C YNL193WP53870 558 aa3.83□□□□□ -1.8
SHH3YMR118C ALD3P54114 506 aa3.83□□□□□ -1.8
SHH3YMR118C EST2Q06163 884 aa3.83□□□□□ -1.8
SHH3YMR118C SFH1Q06168 426 aa3.83□□□□□ -1.8
SHH3YMR118C GAS5Q08193 484 aa3.83□□□□□ -1.8
SHH3YMR118C YOR223WQ12015 292 aa3.83□□□□□ -1.8
SHH3YMR118C HMI1Q12039 706 aa3.83□□□□□ -1.8
SHH3YMR118C DCS2Q12123 353 aa3.83□□□□□ -1.8
SHH3YMR118C GET3Q12154 354 aaKnown RBP3.83□□□□□ -1.8
SHH3YMR118C SNU66Q12420 587 aaPredicted RBP3.83□□□□□ -1.8
SHH3YMR118C SEC39Q12745 709 aa3.83□□□□□ -1.8
SHH3YMR118C LAM4P38800 1345 aa3.83□□□□□ -1.8
SHH3YMR118C SAC3P46674 1301 aa3.83□□□□□ -1.8
SHH3YMR118C DUR1,2P32528 1835 aaKnown RBP3.83□□□□□ -1.8
SHH3YMR118C RSF2P46974 1380 aa3.82□□□□□ -1.8
SHH3YMR118C CDC8P00572 216 aa3.82□□□□□ -1.8
SHH3YMR118C TOP1P04786 769 aa3.82□□□□□ -1.8
SHH3YMR118C CDC37P06101 506 aaKnown RBP3.82□□□□□ -1.8
SHH3YMR118C MTF2P10849 440 aa3.82□□□□□ -1.8
SHH3YMR118C SAC7P17121 654 aa3.82□□□□□ -1.8
SHH3YMR118C PRE10P21242 288 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
SHH3YMR118C BMH1P29311 267 aaKnown RBP3.82□□□□□ -1.8
SHH3YMR118C SRB4P32569 687 aa3.82□□□□□ -1.8
SHH3YMR118C BMH2P34730 273 aaKnown RBP3.82□□□□□ -1.8
SHH3YMR118C SCD5P34758 872 aa3.82□□□□□ -1.8
SHH3YMR118C YET1P35723 206 aa3.82□□□□□ -1.8
SHH3YMR118C APM2P38700 605 aa3.82□□□□□ -1.8
SHH3YMR118C SMF1P38925 575 aa3.82□□□□□ -1.8
SHH3YMR118C SHQ1P40486 507 aaPredicted RBP3.82□□□□□ -1.8
SHH3YMR118C EFM4P40516 257 aa3.82□□□□□ -1.8
SHH3YMR118C YNR040WP53736 256 aa3.82□□□□□ -1.8
SHH3YMR118C ADE16P54113 591 aaKnown RBP3.82□□□□□ -1.8
SHH3YMR118C UBP16Q02863 499 aa3.82□□□□□ -1.8
SHH3YMR118C FCP1Q03254 732 aa3.82□□□□□ -1.8
SHH3YMR118C VPS72Q03388 795 aa3.82□□□□□ -1.8
SHH3YMR118C UTP5Q04177 643 aaKnown RBP3.82□□□□□ -1.8
SHH3YMR118C STE23Q06010 1027 aa3.82□□□□□ -1.8
SHH3YMR118C SPN1Q06505 410 aaPredicted RBP3.82□□□□□ -1.8
SHH3YMR118C NOP6Q07623 225 aaKnown RBP3.82□□□□□ -1.8
SHH3YMR118C NUR1Q12066 484 aa3.82□□□□□ -1.8
SHH3YMR118C RRP6Q12149 733 aaKnown RBP3.82□□□□□ -1.8
SHH3YMR118C TAH18Q12181 623 aa3.82□□□□□ -1.8
SHH3YMR118C CDC6P09119 513 aa3.81□□□□□ -1.8
SHH3YMR118C HAP4P14064 554 aa3.81□□□□□ -1.8
SHH3YMR118C PRP16P15938 1071 aaPredicted RBP3.81□□□□□ -1.8
SHH3YMR118C CKI1P20485 582 aa3.81□□□□□ -1.8
SHH3YMR118C RAD53P22216 821 aa3.81□□□□□ -1.8
SHH3YMR118C SPO11P23179 398 aa3.81□□□□□ -1.8
SHH3YMR118C SWI4P25302 1093 aaKnown RBP3.81□□□□□ -1.8
SHH3YMR118C PHO87P25360 923 aa3.81□□□□□ -1.8
SHH3YMR118C CDC60P26637 1090 aaKnown RBP3.81□□□□□ -1.8
SHH3YMR118C ASF1P32447 279 aa3.81□□□□□ -1.8
SHH3YMR118C CBF5P33322 483 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
SHH3YMR118C RER2P35196 286 aa3.81□□□□□ -1.8
SHH3YMR118C YSW1P38280 609 aa3.81□□□□□ -1.8
SHH3YMR118C CTM1P38818 585 aa3.81□□□□□ -1.8
SHH3YMR118C AKR1P39010 764 aa3.81□□□□□ -1.8
SHH3YMR118C PXA1P41909 870 aa3.81□□□□□ -1.8
SHH3YMR118C TRS85P46944 698 aa3.81□□□□□ -1.8
SHH3YMR118C EIS1Q05050 843 aaKnown RBP3.81□□□□□ -1.8
SHH3YMR118C YDR338CQ05497 695 aa3.81□□□□□ -1.8
SHH3YMR118C YLR287CQ05881 355 aa3.81□□□□□ -1.8
SHH3YMR118C ATG13Q06628 738 aa3.81□□□□□ -1.8
SHH3YMR118C SDH5Q08230 162 aa3.81□□□□□ -1.8
SHH3YMR118C RRI2Q12348 645 aa3.81□□□□□ -1.8
SHH3YMR118C RMP1Q12530 201 aa3.81□□□□□ -1.8
SHH3YMR118C NBL1Q3E7Y6 73 aa3.81□□□□□ -1.8
SHH3YMR118C TY4B-HP0C2J7 1802 aa3.8□□□□□ -1.8
SHH3YMR118C TY4B-JP47024 1803 aa3.8□□□□□ -1.8
SHH3YMR118C JIP3O13555 125 aa3.8□□□□□ -1.8
SHH3YMR118C RAD3P06839 778 aa3.8□□□□□ -1.8
SHH3YMR118C PIF1P07271 859 aa3.8□□□□□ -1.8
SHH3YMR118C SPO12P17123 173 aa3.8□□□□□ -1.8
SHH3YMR118C MCM3P24279 971 aaKnown RBP3.8□□□□□ -1.8
SHH3YMR118C UBP1P25037 809 aa3.8□□□□□ -1.8
SHH3YMR118C RAD57P25301 460 aa3.8□□□□□ -1.8
SHH3YMR118C DEF1P35732 738 aaKnown RBP3.8□□□□□ -1.8
SHH3YMR118C MIP6P38760 659 aaKnown RBP3.8□□□□□ -1.8
SHH3YMR118C BCD1P38772 366 aa3.8□□□□□ -1.8
SHH3YMR118C RRP8P38961 392 aaKnown RBP3.8□□□□□ -1.8
SHH3YMR118C YMR124WP39523 943 aaKnown RBP3.8□□□□□ -1.8
SHH3YMR118C THI12P42883 340 aa3.8□□□□□ -1.8
SHH3YMR118C THI5P43534 340 aa3.8□□□□□ -1.8
SHH3YMR118C THI11P47183 340 aa3.8□□□□□ -1.8
SHH3YMR118C ARI1P53111 347 aaKnown RBP3.8□□□□□ -1.8
SHH3YMR118C NGL3Q03210 505 aa3.8□□□□□ -1.8
SHH3YMR118C EBS1Q03466 884 aaKnown RBP3.8□□□□□ -1.8
SHH3YMR118C KAR5Q04746 504 aa3.8□□□□□ -1.8
SHH3YMR118C MMR1Q06324 491 aa3.8□□□□□ -1.8
SHH3YMR118C THI13Q07748 340 aa3.8□□□□□ -1.8
SHH3YMR118C MDM38Q08179 573 aa3.8□□□□□ -1.8
SHH3YMR118C NEW1Q08972 1196 aaKnown RBP3.8□□□□□ -1.8
SHH3YMR118C SMC6Q12749 1114 aa3.8□□□□□ -1.8
SHH3YMR118C YIL177CP40434 1758 aa3.79□□□□□ -1.8
SHH3YMR118C YJL225CP40889 1758 aa3.79□□□□□ -1.8
SHH3YMR118C HIS4P00815 799 aaKnown RBP3.79□□□□□ -1.8
SHH3YMR118C TOM70P07213 617 aaKnown RBP3.79□□□□□ -1.8
SHH3YMR118C PMR1P13586 950 aa3.79□□□□□ -1.8
SHH3YMR118C VPS1P21576 704 aaKnown RBP3.79□□□□□ -1.8
SHH3YMR118C DAL7P21826 554 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms