RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C YKL151CP36059 337 aa5.9□□□□□ -1.46
VPS20YMR077C MET10P39692 1035 aa5.9□□□□□ -1.46
VPS20YMR077C HRQ1Q05549 1077 aa5.9□□□□□ -1.46
VPS20YMR077C RPC82P32349 654 aa5.89□□□□□ -1.47
VPS20YMR077C PIN4P34217 668 aaKnown RBP RIP-Chip data5.88□□□□□ -1.47not detected
VPS20YMR077C MNR2P35724 969 aa5.88□□□□□ -1.47
VPS20YMR077C KTR4P38131 464 aa5.87□□□□□ -1.47
VPS20YMR077C GIC1P38785 314 aa5.87□□□□□ -1.47
VPS20YMR077C KAR4P25583 335 aa5.86□□□□□ -1.47
VPS20YMR077C KRI1P42846 591 aaKnown RBP5.86□□□□□ -1.47
VPS20YMR077C YOL073CQ08232 322 aa5.86□□□□□ -1.47
VPS20YMR077C LAS17Q12446 633 aa5.86□□□□□ -1.47
VPS20YMR077C SAH1P39954 449 aaKnown RBP5.85□□□□□ -1.47
VPS20YMR077C SRP1Q02821 542 aaKnown RBP5.85□□□□□ -1.47
VPS20YMR077C YLR225CQ05948 407 aaKnown RBP5.85□□□□□ -1.47
VPS20YMR077C SUL1P38359 859 aa5.84□□□□□ -1.47
VPS20YMR077C YLR040CQ07988 224 aa5.84□□□□□ -1.47
VPS20YMR077C STU2P46675 888 aa5.83□□□□□ -1.48
VPS20YMR077C BUL1P48524 976 aa5.83□□□□□ -1.48
VPS20YMR077C OYE2Q03558 400 aaKnown RBP5.83□□□□□ -1.48
VPS20YMR077C OMS1Q06668 471 aa5.83□□□□□ -1.48
VPS20YMR077C TRP4P07285 380 aaPredicted RBP5.82□□□□□ -1.48
VPS20YMR077C CAD1P24813 409 aaKnown RBP5.82□□□□□ -1.48
VPS20YMR077C ERG4P25340 473 aa5.81□□□□□ -1.48
VPS20YMR077C YGR053CP53234 283 aa5.81□□□□□ -1.48
VPS20YMR077C TIM44Q01852 431 aa5.81□□□□□ -1.48
VPS20YMR077C WHI4Q07655 649 aaKnown RBP5.81□□□□□ -1.48
VPS20YMR077C MCH5Q08777 521 aa5.81□□□□□ -1.48
VPS20YMR077C UPC2Q12151 913 aa5.81□□□□□ -1.48
VPS20YMR077C CDC12P32468 407 aaKnown RBP5.8□□□□□ -1.48
VPS20YMR077C QRI1P43123 477 aaKnown RBP5.8□□□□□ -1.48
VPS20YMR077C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48 RIP-Chip
VPS20YMR077C ACF2Q12168 779 aa5.8□□□□□ -1.48
VPS20YMR077C SED4P25365 1065 aa5.79□□□□□ -1.48
VPS20YMR077C GYP7P48365 746 aa5.79□□□□□ -1.48
VPS20YMR077C YKR078WP36158 585 aaKnown RBP5.78□□□□□ -1.48
VPS20YMR077C SFB2P53953 876 aa5.78□□□□□ -1.48
VPS20YMR077C RNT1Q02555 471 aa5.78□□□□□ -1.48
VPS20YMR077C TMN2Q04562 672 aa5.78□□□□□ -1.48
VPS20YMR077C NPP2P39997 493 aa5.77□□□□□ -1.49
VPS20YMR077C RAI1P53063 387 aaKnown RBP5.77□□□□□ -1.49
VPS20YMR077C YML020WQ03722 664 aa5.77□□□□□ -1.49
VPS20YMR077C YER158CP40095 573 aa5.76□□□□□ -1.49
VPS20YMR077C STB4P50104 949 aa5.76□□□□□ -1.49
VPS20YMR077C YPR196WQ06595 470 aa5.76□□□□□ -1.49
VPS20YMR077C NOP8Q08287 484 aaPredicted RBP5.76□□□□□ -1.49
VPS20YMR077C SBA1P28707 216 aaKnown RBP5.75□□□□□ -1.49
VPS20YMR077C STE14P32584 239 aa5.75□□□□□ -1.49
VPS20YMR077C ATF1P40353 525 aa5.75□□□□□ -1.49
VPS20YMR077C AGP1P25376 633 aa5.74□□□□□ -1.49
VPS20YMR077C ABD1P32783 436 aaPredicted RBP5.74□□□□□ -1.49
VPS20YMR077C DUS3Q06053 668 aaKnown RBP5.74□□□□□ -1.49
VPS20YMR077C ESC2Q06340 456 aa5.74□□□□□ -1.49
VPS20YMR077C IRC10Q08118 586 aa5.74□□□□□ -1.49
VPS20YMR077C PPR1P07272 904 aaPredicted RBP5.73□□□□□ -1.49
VPS20YMR077C FAA4P47912 694 aaKnown RBP5.73□□□□□ -1.49
VPS20YMR077C ALG7P07286 448 aa5.72□□□□□ -1.49
VPS20YMR077C CDC48P25694 835 aaKnown RBP5.72□□□□□ -1.49
VPS20YMR077C MBP1P39678 833 aa5.72□□□□□ -1.49
VPS20YMR077C GDE1Q02979 1223 aa5.72□□□□□ -1.49
VPS20YMR077C NAP1P25293 417 aaKnown RBP5.71□□□□□ -1.5
VPS20YMR077C YBR238CP38330 731 aaKnown RBP5.71□□□□□ -1.5
VPS20YMR077C GUS1P46655 708 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
VPS20YMR077C BDF2Q07442 638 aa5.71□□□□□ -1.5
VPS20YMR077C TSL1P38427 1098 aaKnown RBP5.7□□□□□ -1.5
VPS20YMR077C VPS30Q02948 557 aa5.7□□□□□ -1.5
VPS20YMR077C YMR206WQ03695 313 aa5.7□□□□□ -1.5
VPS20YMR077C FAL1Q12099 399 aaKnown RBP5.7□□□□□ -1.5
VPS20YMR077C NOT3P06102 836 aaKnown RBP5.69□□□□□ -1.5
VPS20YMR077C CLN2P20438 545 aa5.69□□□□□ -1.5
VPS20YMR077C CUE2P36075 443 aaKnown RBP5.69□□□□□ -1.5
VPS20YMR077C YKE2P52553 114 aa5.69□□□□□ -1.5
VPS20YMR077C ERG5P54781 538 aa5.69□□□□□ -1.5
VPS20YMR077C STE13P33894 931 aa5.68□□□□□ -1.5
VPS20YMR077C SLU7Q02775 382 aaKnown RBP5.68□□□□□ -1.5
VPS20YMR077C SHE9Q04172 456 aa5.68□□□□□ -1.5
VPS20YMR077C PEX19Q07418 342 aa5.68□□□□□ -1.5
VPS20YMR077C ADE8P04161 214 aa5.67□□□□□ -1.5
VPS20YMR077C PPH3P32345 308 aa5.67□□□□□ -1.5
VPS20YMR077C MTH1P35198 433 aa5.67□□□□□ -1.5
VPS20YMR077C HBT1Q07653 1046 aaKnown RBP5.67□□□□□ -1.5
VPS20YMR077C FBP1P09201 348 aa5.66□□□□□ -1.5
VPS20YMR077C DAS1P47005 663 aa5.66□□□□□ -1.5
VPS20YMR077C MUK1Q02866 612 aa5.66□□□□□ -1.5
VPS20YMR077C VPS16Q03308 798 aa5.66□□□□□ -1.5
VPS20YMR077C MET3P08536 511 aa5.65□□□□□ -1.5
VPS20YMR077C SEC21P32074 935 aaKnown RBP5.65□□□□□ -1.5
VPS20YMR077C CTF13P35203 478 aa5.65□□□□□ -1.5
VPS20YMR077C SPC42P36094 363 aa5.65□□□□□ -1.5
VPS20YMR077C SDP1P40479 209 aa5.65□□□□□ -1.5
VPS20YMR077C GND2P53319 492 aa5.65□□□□□ -1.5
VPS20YMR077C YDR306CQ06640 478 aa5.65□□□□□ -1.5
VPS20YMR077C TRM11Q12463 433 aa5.65□□□□□ -1.5
VPS20YMR077C VBA5P36172 582 aa5.64□□□□□ -1.51
VPS20YMR077C TPO2P53283 614 aa5.64□□□□□ -1.51
VPS20YMR077C DLT1Q04216 342 aa5.64□□□□□ -1.51
VPS20YMR077C SSL1Q04673 461 aaPredicted RBP5.64□□□□□ -1.51
VPS20YMR077C FRE5Q08908 694 aa5.64□□□□□ -1.51
VPS20YMR077C TRM13Q12383 476 aa5.64□□□□□ -1.51
VPS20YMR077C SCT1P32784 759 aa5.63□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 81.6 ms