RNA–Protein interactions for RNA: YMR013C

SEC59, Transcript of Dolichol kinase, yeast

Gene SEC59, Length 1,560 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC59	YMR013C	PRP19	P32523	503 aa	Known RBP	4.57	□□□□□ -1.68
SEC59	YMR013C	REC104	P33323	182 aa		4.57	□□□□□ -1.68
SEC59	YMR013C	YEL1	P34225	687 aa		4.57	□□□□□ -1.68
SEC59	YMR013C	MTC2	P34246	357 aa		4.57	□□□□□ -1.68
SEC59	YMR013C	YJR096W	P47137	282 aa		4.57	□□□□□ -1.68
SEC59	YMR013C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
SEC59	YMR013C	CEF1	Q03654	590 aa	Predicted RBP	4.57	□□□□□ -1.68
SEC59	YMR013C	HRQ1	Q05549	1077 aa		4.57	□□□□□ -1.68
SEC59	YMR013C	YLR257W	Q06146	321 aa	Known RBP	4.57	□□□□□ -1.68
SEC59	YMR013C	PRO1	P32264	428 aa		4.56	□□□□□ -1.68
SEC59	YMR013C	PLC1	P32383	869 aa		4.56	□□□□□ -1.68
SEC59	YMR013C	TFC4	P33339	1025 aa		4.56	□□□□□ -1.68
SEC59	YMR013C	STO1	P34160	861 aa	Known RBP	4.56	□□□□□ -1.68
SEC59	YMR013C	YBR238C	P38330	731 aa	Known RBP	4.56	□□□□□ -1.68
SEC59	YMR013C	TY4A-J	P47023	414 aa		4.56	□□□□□ -1.68
SEC59	YMR013C	YGR283C	P53336	341 aa	Predicted RBP	4.56	□□□□□ -1.68
SEC59	YMR013C	YNL034W	P53963	612 aa		4.56	□□□□□ -1.68
SEC59	YMR013C	YNL018C	P53976	612 aa		4.56	□□□□□ -1.68
SEC59	YMR013C	VMS1	Q04311	632 aa	Known RBP	4.56	□□□□□ -1.68
SEC59	YMR013C	YDL121C	Q07541	149 aa		4.56	□□□□□ -1.68
SEC59	YMR013C	SLA2	P33338	968 aa		4.55	□□□□□ -1.68
SEC59	YMR013C	YKL151C	P36059	337 aa		4.55	□□□□□ -1.68
SEC59	YMR013C	NMD3	P38861	518 aa	Known RBP	4.55	□□□□□ -1.68
SEC59	YMR013C	PEA2	P40091	420 aa		4.55	□□□□□ -1.68
SEC59	YMR013C	CCM1	P48237	864 aa	Predicted RBP	4.55	□□□□□ -1.68
SEC59	YMR013C	KIP3	P53086	805 aa	Known RBP	4.55	□□□□□ -1.68
SEC59	YMR013C	BUD9	P53226	547 aa		4.55	□□□□□ -1.68
SEC59	YMR013C	DOT1	Q04089	582 aa	Known RBP	4.55	□□□□□ -1.68
SEC59	YMR013C	RSC3	Q06639	885 aa		4.55	□□□□□ -1.68
SEC59	YMR013C	GUD1	Q07729	489 aa		4.55	□□□□□ -1.68
SEC59	YMR013C	ACM1	Q08981	209 aa		4.55	□□□□□ -1.68
SEC59	YMR013C	TY4B-P	A0A0B7P3V8	1104 aa		4.54	□□□□□ -1.68
SEC59	YMR013C	PIF1	P07271	859 aa		4.54	□□□□□ -1.68
SEC59	YMR013C	SST2	P11972	698 aa	Known RBP	4.54	□□□□□ -1.68
SEC59	YMR013C	MAE1	P36013	669 aa	Known RBP	4.54	□□□□□ -1.68
SEC59	YMR013C	EMC3	P36039	253 aa		4.54	□□□□□ -1.68
SEC59	YMR013C	PCM1	P38628	557 aa	Known RBP	4.54	□□□□□ -1.68
SEC59	YMR013C	YFL054C	P43549	646 aa		4.54	□□□□□ -1.68
SEC59	YMR013C	CAF16	P43569	289 aa		4.54	□□□□□ -1.68
SEC59	YMR013C	YJL045W	P47052	634 aa		4.54	□□□□□ -1.68
SEC59	YMR013C	ATG16	Q03818	150 aa		4.54	□□□□□ -1.68
SEC59	YMR013C	MET7	Q08645	548 aa		4.54	□□□□□ -1.68
SEC59	YMR013C	ENV7	Q12003	364 aa		4.54	□□□□□ -1.68
SEC59	YMR013C	TY4A-H	Q6Q5P6	413 aa		4.54	□□□□□ -1.68
SEC59	YMR013C	PER1	P25625	357 aa		4.53	□□□□□ -1.68
SEC59	YMR013C	MCD4	P36051	919 aa		4.53	□□□□□ -1.68
SEC59	YMR013C	UGA2	P38067	497 aa		4.53	□□□□□ -1.68
SEC59	YMR013C	CKB2	P38930	258 aa		4.53	□□□□□ -1.68
SEC59	YMR013C	RPN3	P40016	523 aa	Known RBP	4.53	□□□□□ -1.68
SEC59	YMR013C	AIM14	P53109	570 aa		4.53	□□□□□ -1.68
SEC59	YMR013C	DAM1	P53267	343 aa		4.53	□□□□□ -1.68
SEC59	YMR013C	YPL034W	Q03083	165 aa		4.53	□□□□□ -1.68
SEC59	YMR013C	ATP25	Q03153	612 aa		4.53	□□□□□ -1.68
SEC59	YMR013C	GAS5	Q08193	484 aa		4.53	□□□□□ -1.68
SEC59	YMR013C	YOR223W	Q12015	292 aa		4.53	□□□□□ -1.68
SEC59	YMR013C	HMG1	P12683	1054 aa		4.53	□□□□□ -1.69
SEC59	YMR013C	NNK1	P36003	928 aa		4.53	□□□□□ -1.69
SEC59	YMR013C	RRM3	P38766	723 aa		4.53	□□□□□ -1.69
SEC59	YMR013C	COG8	Q04632	607 aa		4.53	□□□□□ -1.69
SEC59	YMR013C	ATG33	Q06485	197 aa		4.53	□□□□□ -1.69
SEC59	YMR013C	HRK1	Q08732	759 aa	Known RBP	4.53	□□□□□ -1.69
SEC59	YMR013C	YTM1	Q12024	460 aa	Predicted RBP	4.53	□□□□□ -1.69
SEC59	YMR013C	HOG1	P32485	435 aa		4.52	□□□□□ -1.69
SEC59	YMR013C	SMY2	P32909	740 aa	Known RBP	4.52	□□□□□ -1.69
SEC59	YMR013C	TSL1	P38427	1098 aa	Known RBP	4.52	□□□□□ -1.69
SEC59	YMR013C	OAF1	P39720	1047 aa	Predicted RBP	4.52	□□□□□ -1.69
SEC59	YMR013C	DUG1	P43616	481 aa	Known RBP	4.52	□□□□□ -1.69
SEC59	YMR013C	NIT3	P49954	291 aa		4.52	□□□□□ -1.69
SEC59	YMR013C	SNP1	Q00916	300 aa	Predicted RBP	4.52	□□□□□ -1.69
SEC59	YMR013C	YDR514C	Q04408	483 aa		4.52	□□□□□ -1.69
SEC59	YMR013C	AEP2	P22136	580 aa		4.51	□□□□□ -1.69
SEC59	YMR013C	DPB3	P27344	201 aa		4.51	□□□□□ -1.69
SEC59	YMR013C	NIT2	P47016	307 aa		4.51	□□□□□ -1.69
SEC59	YMR013C	GYP7	P48365	746 aa		4.51	□□□□□ -1.69
SEC59	YMR013C	YGR021W	P53212	290 aa		4.51	□□□□□ -1.69
SEC59	YMR013C	NCE103	P53615	221 aa		4.51	□□□□□ -1.69
SEC59	YMR013C	DSE4	P53753	1117 aa		4.51	□□□□□ -1.69
SEC59	YMR013C	UBX4	P54730	416 aa		4.51	□□□□□ -1.69
SEC59	YMR013C	MET14	Q02196	202 aa		4.51	□□□□□ -1.69
SEC59	YMR013C	HOS3	Q02959	697 aa	Known RBP	4.51	□□□□□ -1.69
SEC59	YMR013C	GUP2	Q08929	609 aa		4.51	□□□□□ -1.69
SEC59	YMR013C	GIN4	Q12263	1142 aa		4.51	□□□□□ -1.69
SEC59	YMR013C	PGI1	P12709	554 aa	Known RBP	4.5	□□□□□ -1.69
SEC59	YMR013C	DAL3	P32459	195 aa		4.5	□□□□□ -1.69
SEC59	YMR013C	YKR078W	P36158	585 aa	Known RBP	4.5	□□□□□ -1.69
SEC59	YMR013C	NPP2	P39997	493 aa		4.5	□□□□□ -1.69
SEC59	YMR013C	IES5	P40060	125 aa		4.5	□□□□□ -1.69
SEC59	YMR013C	YER158C	P40095	573 aa		4.5	□□□□□ -1.69
SEC59	YMR013C	GZF3	P42944	551 aa	Known RBP	4.5	□□□□□ -1.69
SEC59	YMR013C	PIP2	P52960	996 aa		4.5	□□□□□ -1.69
SEC59	YMR013C	TNA1	P53322	534 aa		4.5	□□□□□ -1.69
SEC59	YMR013C	MDM38	Q08179	573 aa		4.5	□□□□□ -1.69
SEC59	YMR013C	AI3	P03877	415 aa		4.49	□□□□□ -1.69
SEC59	YMR013C	BI4	P03879	638 aa		4.49	□□□□□ -1.69
SEC59	YMR013C	SNF5	P18480	905 aa		4.49	□□□□□ -1.69
SEC59	YMR013C	CDC48	P25694	835 aa	Known RBP	4.49	□□□□□ -1.69
SEC59	YMR013C	YSC84	P32793	468 aa		4.49	□□□□□ -1.69
SEC59	YMR013C	HSP78	P33416	811 aa		4.49	□□□□□ -1.69
SEC59	YMR013C	GPT2	P36148	743 aa		4.49	□□□□□ -1.69
SEC59	YMR013C	GIC1	P38785	314 aa		4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms