RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W HCA4P20448 770 aaKnown RBP2.7□□□□□ -1.98
PRP39YML046W SCS3P53012 380 aa2.7□□□□□ -1.98
PRP39YML046W ILV6P25605 309 aaKnown RBP2.69□□□□□ -1.98
PRP39YML046W RPT1P33299 467 aaKnown RBP2.69□□□□□ -1.98
PRP39YML046W ECM21P38167 1117 aaKnown RBP2.69□□□□□ -1.98
PRP39YML046W PNT1P38969 423 aa2.69□□□□□ -1.98
PRP39YML046W THI7Q05998 598 aa2.69□□□□□ -1.98
PRP39YML046W SPP382Q06411 708 aaPredicted RBP2.69□□□□□ -1.98
PRP39YML046W FLO10P36170 1169 aa2.69□□□□□ -1.98
PRP39YML046W PPS1P38148 807 aa2.68□□□□□ -1.98
PRP39YML046W TIF35Q04067 274 aaKnown RBP2.68□□□□□ -1.98
PRP39YML046W UPC2Q12151 913 aa2.68□□□□□ -1.98
PRP39YML046W TAH11P47112 604 aa2.67□□□□□ -1.98
PRP39YML046W SED4P25365 1065 aa2.67□□□□□ -1.98
PRP39YML046W PPX1P38698 397 aa2.67□□□□□ -1.98
PRP39YML046W MDM38Q08179 573 aa2.67□□□□□ -1.98
PRP39YML046W FRE5Q08908 694 aa2.67□□□□□ -1.98
PRP39YML046W YLL058WQ12198 575 aa2.67□□□□□ -1.98
PRP39YML046W FUN30P31380 1131 aa2.66□□□□□ -1.98
PRP39YML046W VPS73P53142 486 aaKnown RBP2.66□□□□□ -1.98
PRP39YML046W YGR122WP53272 402 aa2.66□□□□□ -1.98
PRP39YML046W ARO10Q06408 635 aa2.66□□□□□ -1.98
PRP39YML046W SSA1P10591 642 aaKnown RBP2.65□□□□□ -1.98
PRP39YML046W CDC43P18898 376 aa2.65□□□□□ -1.98
PRP39YML046W SRT1Q03175 343 aa2.65□□□□□ -1.98
PRP39YML046W MET6P05694 767 aaKnown RBP2.65□□□□□ -1.99
PRP39YML046W RER2P35196 286 aa2.65□□□□□ -1.99
PRP39YML046W ERG5P54781 538 aa2.65□□□□□ -1.99
PRP39YML046W GCR1P07261 785 aa2.64□□□□□ -1.99
PRP39YML046W MET3P08536 511 aa2.64□□□□□ -1.99
PRP39YML046W GIC1P38785 314 aa2.64□□□□□ -1.99
PRP39YML046W THI12P42883 340 aa2.64□□□□□ -1.99
PRP39YML046W THI5P43534 340 aa2.64□□□□□ -1.99
PRP39YML046W THI11P47183 340 aa2.64□□□□□ -1.99
PRP39YML046W SLU7Q02775 382 aaKnown RBP2.64□□□□□ -1.99
PRP39YML046W THI13Q07748 340 aa2.64□□□□□ -1.99
PRP39YML046W RAD2P07276 1031 aa2.63□□□□□ -1.99
PRP39YML046W STE14P32584 239 aa2.63□□□□□ -1.99
PRP39YML046W YIL166CP40445 542 aa2.63□□□□□ -1.99
PRP39YML046W HRQ1Q05549 1077 aa2.63□□□□□ -1.99
PRP39YML046W ADY2P25613 283 aa2.62□□□□□ -1.99
PRP39YML046W YUR1P26725 428 aa2.62□□□□□ -1.99
PRP39YML046W RAD27P26793 382 aa2.62□□□□□ -1.99
PRP39YML046W ELO3P40319 345 aa2.62□□□□□ -1.99
PRP39YML046W DLT1Q04216 342 aa2.62□□□□□ -1.99
PRP39YML046W WHI5Q12416 295 aa2.62□□□□□ -1.99
PRP39YML046W KIN3P22209 435 aa2.62□□□□□ -1.99
PRP39YML046W YKL151CP36059 337 aa2.62□□□□□ -1.99
PRP39YML046W ADY4Q05955 493 aa2.62□□□□□ -1.99
PRP39YML046W GAT1P43574 510 aa2.61□□□□□ -1.99
PRP39YML046W PEX19Q07418 342 aa2.61□□□□□ -1.99
PRP39YML046W RPC82P32349 654 aa2.6□□□□□ -1.99
PRP39YML046W PCL5P38794 229 aa2.6□□□□□ -1.99
PRP39YML046W PUS2P53167 370 aa2.6□□□□□ -1.99
PRP39YML046W CAF20P12962 161 aaKnown RBP2.59□□□□□ -1.99
PRP39YML046W CYC8P14922 966 aa2.59□□□□□ -1.99
PRP39YML046W SEC21P32074 935 aaKnown RBP2.58□□□□□ -2
PRP39YML046W ORC2P32833 620 aa2.58□□□□□ -2
PRP39YML046W RGT1P32862 1170 aa2.58□□□□□ -2
PRP39YML046W CTF13P35203 478 aa2.58□□□□□ -2
PRP39YML046W RAI1P53063 387 aaKnown RBP2.58□□□□□ -2
PRP39YML046W SFB2P53953 876 aa2.58□□□□□ -2
PRP39YML046W MSC6Q08818 692 aaKnown RBP2.58□□□□□ -2
PRP39YML046W SAH1P39954 449 aaKnown RBP2.58□□□□□ -2
PRP39YML046W NPP2P39997 493 aa2.58□□□□□ -2
PRP39YML046W RLF2Q12495 606 aa2.58□□□□□ -2
PRP39YML046W STM1P39015 273 aaKnown RBP2.57□□□□□ -2
PRP39YML046W RPS26AP39938 119 aaKnown RBP2.57□□□□□ -2
PRP39YML046W RPS26BP39939 119 aaKnown RBP2.57□□□□□ -2
PRP39YML046W APM1Q00776 475 aaPredicted RBP2.57□□□□□ -2
PRP39YML046W CRR1Q05790 422 aa2.57□□□□□ -2
PRP39YML046W MRI1Q06489 411 aaKnown RBP2.57□□□□□ -2
PRP39YML046W RTT10Q08924 1013 aa2.57□□□□□ -2
PRP39YML046W YPL066WQ12194 479 aa2.57□□□□□ -2
PRP39YML046W TRM11Q12463 433 aa2.57□□□□□ -2
PRP39YML046W RKM4Q12504 494 aa2.57□□□□□ -2
PRP39YML046W INO1P11986 533 aa2.56□□□□□ -2
PRP39YML046W SPO11P23179 398 aa2.56□□□□□ -2
PRP39YML046W DMC1P25453 334 aa2.56□□□□□ -2
PRP39YML046W LYP1P32487 611 aa2.56□□□□□ -2
PRP39YML046W YKL107WP34251 309 aa2.56□□□□□ -2
PRP39YML046W MOT2P34909 587 aaKnown RBP2.56□□□□□ -2
PRP39YML046W STB2P46679 850 aa2.56□□□□□ -2
PRP39YML046W RIA1P53893 1110 aa2.56□□□□□ -2
PRP39YML046W YPR196WQ06595 470 aa2.56□□□□□ -2
PRP39YML046W TRP2P00899 507 aaKnown RBP2.55□□□□□ -2
PRP39YML046W YGL176CP46945 554 aa2.55□□□□□ -2
PRP39YML046W RIM13Q03792 727 aa2.55□□□□□ -2
PRP39YML046W TMA46Q12000 345 aaKnown RBP2.55□□□□□ -2
PRP39YML046W FKH2P41813 862 aa2.54□□□□□ -2
PRP39YML046W YJL163CP46996 555 aa2.54□□□□□ -2
PRP39YML046W MUP1P50276 574 aa2.54□□□□□ -2
PRP39YML046W SWM1Q12379 170 aa2.54□□□□□ -2
PRP39YML046W DAM1P53267 343 aa2.54□□□□□ -2
PRP39YML046W SDP1P40479 209 aa2.52□□□□□ -2.01
PRP39YML046W BPL1P48445 690 aaPredicted RBP2.52□□□□□ -2.01
PRP39YML046W SRP1Q02821 542 aaKnown RBP2.52□□□□□ -2.01
PRP39YML046W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
PRP39YML046W SEG1Q04279 960 aa2.52□□□□□ -2.01
PRP39YML046W RGT2Q12300 763 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 112.9 ms