RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C LAM5P43560 674 aa7.81□□□□□ -1.16
AFG2YLR397C ENP2P48234 707 aaKnown RBP7.81□□□□□ -1.16
AFG2YLR397C MAL13P53338 473 aa7.81□□□□□ -1.16
AFG2YLR397C CIK1Q01649 594 aa7.81□□□□□ -1.16
AFG2YLR397C MMT1Q03218 510 aa7.81□□□□□ -1.16
AFG2YLR397C VPS36Q06696 566 aa7.81□□□□□ -1.16
AFG2YLR397C BUG1Q12191 341 aa7.81□□□□□ -1.16
AFG2YLR397C OSH2Q12451 1283 aa7.81□□□□□ -1.16
AFG2YLR397C TPM1P17536 199 aaKnown RBP7.8□□□□□ -1.16
AFG2YLR397C CKI1P20485 582 aa7.8□□□□□ -1.16
AFG2YLR397C OSM1P21375 501 aaKnown RBP7.8□□□□□ -1.16
AFG2YLR397C SEC8P32855 1065 aa7.8□□□□□ -1.16
AFG2YLR397C YFL066CP43538 392 aa7.8□□□□□ -1.16
AFG2YLR397C UBA2P52488 636 aa7.8□□□□□ -1.16
AFG2YLR397C TMA64Q04600 565 aaKnown RBP7.8□□□□□ -1.16
AFG2YLR397C IES3Q12345 250 aa7.8□□□□□ -1.16
AFG2YLR397C SIR4P11978 1358 aa7.8□□□□□ -1.16
AFG2YLR397C YML002WP0CF17 737 aa7.8□□□□□ -1.16
AFG2YLR397C VPS1P21576 704 aaKnown RBP7.8□□□□□ -1.16
AFG2YLR397C MSM1P22438 575 aa7.8□□□□□ -1.16
AFG2YLR397C TPS2P31688 896 aaKnown RBP7.8□□□□□ -1.16
AFG2YLR397C PYC2P32327 1180 aaKnown RBP7.8□□□□□ -1.16
AFG2YLR397C TMN3P40071 706 aa7.8□□□□□ -1.16
AFG2YLR397C ULP1Q02724 621 aa7.8□□□□□ -1.16
AFG2YLR397C ATG17Q06410 417 aa7.8□□□□□ -1.16
AFG2YLR397C YLR001CQ07895 862 aa7.8□□□□□ -1.16
AFG2YLR397C CDC53Q12018 815 aaKnown RBP7.8□□□□□ -1.16
AFG2YLR397C CHC1P22137 1653 aaKnown RBP7.8□□□□□ -1.16
AFG2YLR397C PDR12Q02785 1511 aa7.79□□□□□ -1.16
AFG2YLR397C KIN2P13186 1147 aaKnown RBP7.79□□□□□ -1.16
AFG2YLR397C PTR2P32901 601 aa7.79□□□□□ -1.16
AFG2YLR397C AVT6P40074 448 aa7.79□□□□□ -1.16
AFG2YLR397C MET12P46151 657 aa7.79□□□□□ -1.16
AFG2YLR397C MDE1P47095 244 aa7.79□□□□□ -1.16
AFG2YLR397C PRP43P53131 767 aaKnown RBP7.79□□□□□ -1.16
AFG2YLR397C NNT1Q05874 261 aa7.79□□□□□ -1.16
AFG2YLR397C OPY2Q06810 360 aa7.79□□□□□ -1.16
AFG2YLR397C RPO21P04050 1733 aaKnown RBP7.79□□□□□ -1.16
AFG2YLR397C YMR085WP0CF18 432 aa7.79□□□□□ -1.16
AFG2YLR397C DPB2P24482 689 aaPredicted RBP7.79□□□□□ -1.16
AFG2YLR397C KIP1P28742 1111 aa7.79□□□□□ -1.16
AFG2YLR397C YEL043WP32618 956 aa7.79□□□□□ -1.16
AFG2YLR397C VPS8P39702 1274 aa7.79□□□□□ -1.16
AFG2YLR397C FKH1P40466 484 aa7.79□□□□□ -1.16
AFG2YLR397C RPM2Q02773 1202 aa7.79□□□□□ -1.16
AFG2YLR397C YLR125WQ12138 136 aa7.79□□□□□ -1.16
AFG2YLR397C DBP10Q12389 995 aaKnown RBP7.79□□□□□ -1.16
AFG2YLR397C NOT5Q12514 560 aaPredicted RBP7.79□□□□□ -1.16
AFG2YLR397C POL30P15873 258 aaKnown RBP7.78□□□□□ -1.16
AFG2YLR397C POL4P25615 582 aa7.78□□□□□ -1.16
AFG2YLR397C PRR1P28708 518 aa7.78□□□□□ -1.16
AFG2YLR397C AFG2P32794 780 aa7.78□□□□□ -1.16
AFG2YLR397C NPT1P39683 429 aaKnown RBP7.78□□□□□ -1.16
AFG2YLR397C ALB1P47019 175 aaPredicted RBP7.78□□□□□ -1.16
AFG2YLR397C BRO1P48582 844 aa7.78□□□□□ -1.16
AFG2YLR397C RTS3P53289 263 aa7.78□□□□□ -1.16
AFG2YLR397C PNG1Q02890 363 aa7.78□□□□□ -1.16
AFG2YLR397C RKM1Q08961 583 aaPredicted RBP7.78□□□□□ -1.16
AFG2YLR397C ACF2Q12168 779 aa7.78□□□□□ -1.16
AFG2YLR397C MDS3P53094 1487 aa7.78□□□□□ -1.16
AFG2YLR397C LTE1P07866 1435 aa7.78□□□□□ -1.16
AFG2YLR397C RPL24AP04449 155 aaKnown RBP7.78□□□□□ -1.16
AFG2YLR397C MPH3P0CE00 602 aa7.78□□□□□ -1.16
AFG2YLR397C BAS1P22035 811 aa7.78□□□□□ -1.16
AFG2YLR397C LCB1P25045 558 aaKnown RBP7.78□□□□□ -1.16
AFG2YLR397C MVD1P32377 396 aaKnown RBP7.78□□□□□ -1.16
AFG2YLR397C VPS21P36017 210 aaKnown RBP7.78□□□□□ -1.16
AFG2YLR397C FES1P38260 290 aa7.78□□□□□ -1.16
AFG2YLR397C RTS1P38903 757 aa7.78□□□□□ -1.16
AFG2YLR397C RGA1P39083 1007 aa7.78□□□□□ -1.16
AFG2YLR397C PIK1P39104 1066 aa7.78□□□□□ -1.16
AFG2YLR397C COX20Q04935 205 aa7.78□□□□□ -1.16
AFG2YLR397C TMA46Q12000 345 aaKnown RBP7.78□□□□□ -1.16
AFG2YLR397C RMP1Q12530 201 aa7.78□□□□□ -1.16
AFG2YLR397C CNA1P23287 553 aa7.77□□□□□ -1.17
AFG2YLR397C SEC65P29478 273 aa7.77□□□□□ -1.17
AFG2YLR397C MNN2P38069 597 aa7.77□□□□□ -1.17
AFG2YLR397C GIP1P38229 639 aa7.77□□□□□ -1.17
AFG2YLR397C CCC2P38995 1004 aa7.77□□□□□ -1.17
AFG2YLR397C AIM9P40053 627 aaKnown RBP7.77□□□□□ -1.17
AFG2YLR397C RFX1P48743 811 aa7.77□□□□□ -1.17
AFG2YLR397C YGR122WP53272 402 aa7.77□□□□□ -1.17
AFG2YLR397C FDC1Q03034 503 aa7.77□□□□□ -1.17
AFG2YLR397C CSI1Q04368 295 aa7.77□□□□□ -1.17
AFG2YLR397C SPC24Q04477 213 aa7.77□□□□□ -1.17
AFG2YLR397C YLR287CQ05881 355 aa7.77□□□□□ -1.17
AFG2YLR397C VPS38Q05919 439 aa7.77□□□□□ -1.17
AFG2YLR397C TAF3Q12297 353 aa7.77□□□□□ -1.17
AFG2YLR397C LSO2Q3E772 92 aaKnown RBP7.77□□□□□ -1.17
AFG2YLR397C REP1P03871 373 aa7.77□□□□□ -1.17
AFG2YLR397C GPA2P10823 449 aa7.77□□□□□ -1.17
AFG2YLR397C ADE2P21264 571 aaKnown RBP7.77□□□□□ -1.17
AFG2YLR397C TSR4P25040 408 aa7.77□□□□□ -1.17
AFG2YLR397C BUD23P25627 275 aaPredicted RBP7.77□□□□□ -1.17
AFG2YLR397C HEK2P38199 381 aaKnown RBP RIP-Chip data7.77□□□□□ -1.17not detected
AFG2YLR397C AST2P39945 430 aaKnown RBP7.77□□□□□ -1.17
AFG2YLR397C YGL176CP46945 554 aa7.77□□□□□ -1.17
AFG2YLR397C APS3P47064 194 aa7.77□□□□□ -1.17
AFG2YLR397C MPS2P53159 387 aa7.77□□□□□ -1.17
AFG2YLR397C YNL108CP53929 270 aa7.77□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 78.9 ms