RNA–Protein interactions for RNA: YLR363C

NMD4, Transcript of Protein that may be involved in nonsense-mediated mRNA decay, yeastyeast

Gene NMD4, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD4YLR363C NUP170P38181 1502 aa7.08□□□□□ -1.28
NMD4YLR363C BI4P03879 638 aa7.08□□□□□ -1.28
NMD4YLR363C KIN2P13186 1147 aaKnown RBP7.08□□□□□ -1.28
NMD4YLR363C RNQ1P25367 405 aa7.08□□□□□ -1.28
NMD4YLR363C VBA5P36172 582 aa7.08□□□□□ -1.28
NMD4YLR363C RRT14P40470 206 aa7.08□□□□□ -1.28
NMD4YLR363C CDA2Q06703 312 aa7.08□□□□□ -1.28
NMD4YLR363C YOR352WQ08816 343 aa7.08□□□□□ -1.28
NMD4YLR363C WRS1Q12109 432 aaKnown RBP7.08□□□□□ -1.28
NMD4YLR363C ACE2P21192 770 aa7.07□□□□□ -1.28
NMD4YLR363C MRP8P35719 219 aa7.07□□□□□ -1.28
NMD4YLR363C SPF1P39986 1215 aaKnown RBP7.07□□□□□ -1.28
NMD4YLR363C MAP1Q01662 387 aaKnown RBP RIP-Chip data7.07□□□□□ -1.28not detected
NMD4YLR363C TDA5Q06417 326 aaKnown RBP7.07□□□□□ -1.28
NMD4YLR363C IRC20Q06554 1556 aa7.07□□□□□ -1.28
NMD4YLR363C CYC1P00044 109 aaPredicted RBP7.06□□□□□ -1.28
NMD4YLR363C MBP1P39678 833 aa7.06□□□□□ -1.28
NMD4YLR363C APL1P27351 700 aa7.05□□□□□ -1.28
NMD4YLR363C SGD1Q06132 899 aa7.05□□□□□ -1.28
NMD4YLR363C SSF2Q12153 453 aaPredicted RBP7.05□□□□□ -1.28
NMD4YLR363C PDR12Q02785 1511 aa7.05□□□□□ -1.28
NMD4YLR363C YLL058WQ12198 575 aa7.04□□□□□ -1.28
NMD4YLR363C TRM3Q07527 1436 aa7.03□□□□□ -1.28
NMD4YLR363C DNF2Q12675 1612 aa7.03□□□□□ -1.28
NMD4YLR363C PBY1P38254 753 aa7.03□□□□□ -1.28
NMD4YLR363C IRR1P40541 1150 aa7.03□□□□□ -1.28
NMD4YLR363C SRP1Q02821 542 aaKnown RBP7.03□□□□□ -1.28
NMD4YLR363C ULS1Q08562 1619 aa7.02□□□□□ -1.29
NMD4YLR363C CMP2P14747 604 aa7.02□□□□□ -1.29
NMD4YLR363C AIM3P38266 947 aaKnown RBP7.02□□□□□ -1.29
NMD4YLR363C UBP5P39944 805 aa7.02□□□□□ -1.29
NMD4YLR363C MTC3P53077 123 aa7.02□□□□□ -1.29
NMD4YLR363C SIZ1Q04195 904 aa7.02□□□□□ -1.29
NMD4YLR363C HRQ1Q05549 1077 aa7.02□□□□□ -1.29
NMD4YLR363C RIB2Q12362 591 aaKnown RBP7.02□□□□□ -1.29
NMD4YLR363C SPO14P36126 1683 aa7.02□□□□□ -1.29
NMD4YLR363C PRP6P19735 899 aaPredicted RBP7.01□□□□□ -1.29
NMD4YLR363C GRX1P25373 110 aaKnown RBP7.01□□□□□ -1.29
NMD4YLR363C YKL151CP36059 337 aa7.01□□□□□ -1.29
NMD4YLR363C LAM1P38851 1228 aa7.01□□□□□ -1.29
NMD4YLR363C SAH1P39954 449 aaKnown RBP7.01□□□□□ -1.29
NMD4YLR363C HFM1P51979 1187 aa7.01□□□□□ -1.29
NMD4YLR363C RIM8P53179 542 aa7.01□□□□□ -1.29
NMD4YLR363C IQG1Q12280 1495 aa7□□□□□ -1.29
NMD4YLR363C SOD2P00447 233 aa7□□□□□ -1.29
NMD4YLR363C GAL10P04397 699 aa7□□□□□ -1.29
NMD4YLR363C RPS13P05756 151 aaKnown RBP7□□□□□ -1.29
NMD4YLR363C DUS3Q06053 668 aaKnown RBP7□□□□□ -1.29
NMD4YLR363C MDM38Q08179 573 aa7□□□□□ -1.29
NMD4YLR363C SRM1P21827 482 aa6.99□□□□□ -1.29
NMD4YLR363C MEF2P39677 819 aa6.99□□□□□ -1.29
NMD4YLR363C GUS1P46655 708 aaKnown RBP RIP-Chip data6.99□□□□□ -1.29not detected
NMD4YLR363C MSC2Q03455 724 aa6.99□□□□□ -1.29
NMD4YLR363C ROT1Q03691 256 aa6.99□□□□□ -1.29
NMD4YLR363C VTS1Q08831 523 aaKnown RBP RIP-Chip data6.99□□□□□ -1.29not detected
NMD4YLR363C YPL277CQ08989 487 aa6.99□□□□□ -1.29
NMD4YLR363C OSW2Q12202 724 aa6.99□□□□□ -1.29
NMD4YLR363C STE5P32917 917 aa6.98□□□□□ -1.29
NMD4YLR363C YBR184WP38299 523 aa6.98□□□□□ -1.29
NMD4YLR363C PBP1P53297 722 aaKnown RBP6.98□□□□□ -1.29
NMD4YLR363C NAN1Q02931 896 aaKnown RBP6.98□□□□□ -1.29
NMD4YLR363C GDB1Q06625 1536 aa6.97□□□□□ -1.29
NMD4YLR363C PRP9P19736 530 aaKnown RBP6.97□□□□□ -1.29
NMD4YLR363C CDC12P32468 407 aaKnown RBP6.97□□□□□ -1.29
NMD4YLR363C SRT1Q03175 343 aa6.97□□□□□ -1.29
NMD4YLR363C GCN5Q03330 439 aa6.97□□□□□ -1.29
NMD4YLR363C PLB2Q03674 706 aa6.97□□□□□ -1.29
NMD4YLR363C YDR132CQ03900 495 aa6.97□□□□□ -1.29
NMD4YLR363C YDR306CQ06640 478 aa6.97□□□□□ -1.29
NMD4YLR363C BUD3P25558 1636 aa6.97□□□□□ -1.29
NMD4YLR363C MLP2P40457 1679 aa6.96□□□□□ -1.29
NMD4YLR363C NUP157P40064 1391 aaKnown RBP6.96□□□□□ -1.29
NMD4YLR363C PDR10P51533 1564 aa6.96□□□□□ -1.29
NMD4YLR363C FUN30P31380 1131 aa6.96□□□□□ -1.3
NMD4YLR363C THI80P35202 319 aa6.96□□□□□ -1.3
NMD4YLR363C YAP1801P38856 637 aa6.96□□□□□ -1.3
NMD4YLR363C YJL049WP47048 450 aa6.96□□□□□ -1.3
NMD4YLR363C TPO2P53283 614 aa6.96□□□□□ -1.3
NMD4YLR363C SCT1P32784 759 aa6.95□□□□□ -1.3
NMD4YLR363C GIC1P38785 314 aa6.95□□□□□ -1.3
NMD4YLR363C TAT2P38967 592 aa6.95□□□□□ -1.3
NMD4YLR363C SPO75Q07798 868 aa6.95□□□□□ -1.3
NMD4YLR363C XYL2Q07993 356 aa6.95□□□□□ -1.3
NMD4YLR363C DOP1Q03921 1698 aa6.95□□□□□ -1.3
NMD4YLR363C PPH3P32345 308 aa6.94□□□□□ -1.3
NMD4YLR363C AAR2P32357 355 aaPredicted RBP6.94□□□□□ -1.3
NMD4YLR363C TOD6P34219 525 aa6.94□□□□□ -1.3
NMD4YLR363C SPT20P50875 604 aa6.94□□□□□ -1.3
NMD4YLR363C DUS4Q06063 367 aa6.94□□□□□ -1.3
NMD4YLR363C FMP25Q08023 583 aa6.94□□□□□ -1.3
NMD4YLR363C ADE8P04161 214 aa6.93□□□□□ -1.3
NMD4YLR363C PFD1P46988 109 aa6.93□□□□□ -1.3
NMD4YLR363C RXT3Q07458 294 aa6.93□□□□□ -1.3
NMD4YLR363C ECM21P38167 1117 aaKnown RBP6.92□□□□□ -1.3
NMD4YLR363C GYP7P48365 746 aa6.92□□□□□ -1.3
NMD4YLR363C UTP8P53276 713 aaKnown RBP6.92□□□□□ -1.3
NMD4YLR363C GPB1Q08886 897 aa6.92□□□□□ -1.3
NMD4YLR363C OSH2Q12451 1283 aa6.92□□□□□ -1.3
NMD4YLR363C RAD4P14736 754 aa6.91□□□□□ -1.3
NMD4YLR363C RPL8BP29453 256 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms