RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W ADE8P04161 214 aa5.54□□□□□ -1.52
SMD2YLR275W RPC82P32349 654 aa5.54□□□□□ -1.52
SMD2YLR275W YKR078WP36158 585 aaKnown RBP5.54□□□□□ -1.52
SMD2YLR275W YER158CP40095 573 aa5.54□□□□□ -1.52
SMD2YLR275W CDA1Q06702 301 aa5.54□□□□□ -1.52
SMD2YLR275W ADY3Q07732 790 aa5.54□□□□□ -1.52
SMD2YLR275W FMP25Q08023 583 aa5.54□□□□□ -1.52
SMD2YLR275W HSF1P10961 833 aa5.53□□□□□ -1.52
SMD2YLR275W TSL1P38427 1098 aaKnown RBP5.53□□□□□ -1.52
SMD2YLR275W SIT1P39980 628 aa5.53□□□□□ -1.52
SMD2YLR275W MET12P46151 657 aa5.53□□□□□ -1.52
SMD2YLR275W YPR196WQ06595 470 aa5.53□□□□□ -1.52
SMD2YLR275W SPO75Q07798 868 aa5.53□□□□□ -1.52
SMD2YLR275W NOP12Q08208 459 aaKnown RBP5.53□□□□□ -1.52
SMD2YLR275W RPP2AP05319 106 aaKnown RBP5.52□□□□□ -1.53
SMD2YLR275W NPP1P25353 742 aa5.52□□□□□ -1.53
SMD2YLR275W CTS1P29029 562 aa5.52□□□□□ -1.53
SMD2YLR275W HBS1P32769 611 aaKnown RBP5.52□□□□□ -1.53
SMD2YLR275W YRO2P38079 344 aa5.52□□□□□ -1.53
SMD2YLR275W CCC2P38995 1004 aa5.52□□□□□ -1.53
SMD2YLR275W MPT5P39016 859 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
SMD2YLR275W ALR2P43553 858 aa5.52□□□□□ -1.53
SMD2YLR275W PSP2P50109 593 aaKnown RBP5.52□□□□□ -1.53
SMD2YLR275W YLR224WQ05947 369 aa5.52□□□□□ -1.53
SMD2YLR275W HIS5P07172 385 aa5.51□□□□□ -1.53
SMD2YLR275W SPE1P08432 466 aa5.51□□□□□ -1.53
SMD2YLR275W RAD4P14736 754 aa5.51□□□□□ -1.53
SMD2YLR275W CDC48P25694 835 aaKnown RBP5.51□□□□□ -1.53
SMD2YLR275W RPL8BP29453 256 aaKnown RBP5.51□□□□□ -1.53
SMD2YLR275W AFR1P33304 620 aa5.51□□□□□ -1.53
SMD2YLR275W LST4P34239 828 aa5.51□□□□□ -1.53
SMD2YLR275W YJL049WP47048 450 aa5.51□□□□□ -1.53
SMD2YLR275W ERP6P53198 216 aa5.51□□□□□ -1.53
SMD2YLR275W UTP8P53276 713 aaKnown RBP5.51□□□□□ -1.53
SMD2YLR275W TMA10Q06177 86 aa5.51□□□□□ -1.53
SMD2YLR275W EAF1Q06337 982 aa5.51□□□□□ -1.53
SMD2YLR275W STE11P23561 717 aa5.5□□□□□ -1.53
SMD2YLR275W CDC11P32458 415 aa5.5□□□□□ -1.53
SMD2YLR275W SCT1P32784 759 aa5.5□□□□□ -1.53
SMD2YLR275W SHM2P37291 469 aaKnown RBP5.5□□□□□ -1.53
SMD2YLR275W OSH2Q12451 1283 aa5.5□□□□□ -1.53
SMD2YLR275W YBR238CP38330 731 aaKnown RBP5.49□□□□□ -1.53
SMD2YLR275W YKE2P52553 114 aa5.49□□□□□ -1.53
SMD2YLR275W UBX5Q06682 500 aa5.49□□□□□ -1.53
SMD2YLR275W ARE1P25628 610 aa5.48□□□□□ -1.53
SMD2YLR275W ATG19P35193 415 aa5.48□□□□□ -1.53
SMD2YLR275W PLB1P39105 664 aa5.48□□□□□ -1.53
SMD2YLR275W CHA4P43634 648 aa5.48□□□□□ -1.53
SMD2YLR275W TIM54P47045 478 aa5.48□□□□□ -1.53
SMD2YLR275W CCM1P48237 864 aaPredicted RBP5.48□□□□□ -1.53
SMD2YLR275W MNN10P50108 393 aaKnown RBP5.48□□□□□ -1.53
SMD2YLR275W RAI1P53063 387 aaKnown RBP5.48□□□□□ -1.53
SMD2YLR275W MCM6P53091 1017 aaKnown RBP5.48□□□□□ -1.53
SMD2YLR275W BUL2Q03758 920 aaKnown RBP5.48□□□□□ -1.53
SMD2YLR275W LCD1Q04377 747 aa5.48□□□□□ -1.53
SMD2YLR275W HSP60P19882 572 aaKnown RBP5.47□□□□□ -1.53
SMD2YLR275W ERT1P38140 529 aa5.47□□□□□ -1.53
SMD2YLR275W YBR284WP38150 797 aa5.46□□□□□ -1.54
SMD2YLR275W TOK1P40310 691 aa5.46□□□□□ -1.54
SMD2YLR275W YGR125WP53273 1036 aa5.46□□□□□ -1.54
SMD2YLR275W YPR071WQ12346 211 aa5.46□□□□□ -1.54
SMD2YLR275W NOT3P06102 836 aaKnown RBP5.45□□□□□ -1.54
SMD2YLR275W REC104P33323 182 aa5.45□□□□□ -1.54
SMD2YLR275W URM1P40554 99 aaPredicted RBP5.45□□□□□ -1.54
SMD2YLR275W NNF1P47149 201 aa5.45□□□□□ -1.54
SMD2YLR275W WHI4Q07655 649 aaKnown RBP5.45□□□□□ -1.54
SMD2YLR275W HBN1Q96VH4 193 aa5.45□□□□□ -1.54
SMD2YLR275W CIT1P00890 479 aa5.44□□□□□ -1.54
SMD2YLR275W PET10P36139 283 aa5.44□□□□□ -1.54
SMD2YLR275W KCS1Q12494 1050 aa5.44□□□□□ -1.54
SMD2YLR275W MSD1P15179 658 aaKnown RBP5.43□□□□□ -1.54
SMD2YLR275W RFA1P22336 621 aaKnown RBP5.43□□□□□ -1.54
SMD2YLR275W HCM1P25364 564 aa5.43□□□□□ -1.54
SMD2YLR275W STE13P33894 931 aa5.43□□□□□ -1.54
SMD2YLR275W YHR020WP38708 688 aaKnown RBP5.43□□□□□ -1.54
SMD2YLR275W IOC3P43596 787 aa5.43□□□□□ -1.54
SMD2YLR275W NCS6P53088 359 aa5.43□□□□□ -1.54
SMD2YLR275W HUL5P53119 910 aa5.43□□□□□ -1.54
SMD2YLR275W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
SMD2YLR275W VPS30Q02948 557 aa5.43□□□□□ -1.54
SMD2YLR275W FLC1Q08967 793 aa5.43□□□□□ -1.54
SMD2YLR275W NPC2Q12408 173 aa5.43□□□□□ -1.54
SMD2YLR275W HUL4P40985 892 aa5.42□□□□□ -1.54
SMD2YLR275W TAF8Q03750 510 aa5.42□□□□□ -1.54
SMD2YLR275W YDL124WQ07551 312 aaKnown RBP5.42□□□□□ -1.54
SMD2YLR275W PMA1P05030 918 aaKnown RBP5.41□□□□□ -1.54
SMD2YLR275W TOP3P13099 656 aa5.41□□□□□ -1.54
SMD2YLR275W DCG1P32460 244 aa5.41□□□□□ -1.54
SMD2YLR275W EXG2P52911 562 aa5.41□□□□□ -1.54
SMD2YLR275W NSE3Q05541 303 aa5.41□□□□□ -1.54
SMD2YLR275W BDF2Q07442 638 aa5.41□□□□□ -1.54
SMD2YLR275W UPC2Q12151 913 aa5.41□□□□□ -1.54
SMD2YLR275W TUB2P02557 457 aaKnown RBP5.4□□□□□ -1.54
SMD2YLR275W TRM2P33753 639 aa5.4□□□□□ -1.54
SMD2YLR275W PHO23P50947 330 aa5.4□□□□□ -1.54
SMD2YLR275W SSL1Q04673 461 aaPredicted RBP5.4□□□□□ -1.54
SMD2YLR275W GSF2Q04697 403 aaKnown RBP5.4□□□□□ -1.54
SMD2YLR275W CDC53Q12018 815 aaKnown RBP5.4□□□□□ -1.54
SMD2YLR275W NTO1Q12311 748 aa5.4□□□□□ -1.54
SMD2YLR275W STI1P15705 589 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms