RNA–Protein interactions for RNA: YLR140W

YLR140W, Transcript of Dubious open reading frame unlikely to encode a functional protein, yeast

Gene YLR140W, Length 327 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YLR140W	YLR140W	MRH1	Q12117	320 aa	Predicted RBP	2.68	□□□□□ -1.98
YLR140W	YLR140W	SUT2	Q12286	268 aa		2.68	□□□□□ -1.98
YLR140W	YLR140W	TRM13	Q12383	476 aa		2.68	□□□□□ -1.98
YLR140W	YLR140W	GCR1	P07261	785 aa		2.67	□□□□□ -1.98
YLR140W	YLR140W	YGR122W	P53272	402 aa		2.67	□□□□□ -1.98
YLR140W	YLR140W	YNL162W-A	Q3E7A8	72 aa		2.67	□□□□□ -1.98
YLR140W	YLR140W	RER2	P35196	286 aa		2.66	□□□□□ -1.98
YLR140W	YLR140W	RIX1	P38883	763 aa	Predicted RBP	2.66	□□□□□ -1.98
YLR140W	YLR140W	SEC5	P89102	971 aa		2.66	□□□□□ -1.98
YLR140W	YLR140W	UPC2	Q12151	913 aa		2.66	□□□□□ -1.98
YLR140W	YLR140W	RLF2	Q12495	606 aa		2.66	□□□□□ -1.98
YLR140W	YLR140W	RAD2	P07276	1031 aa		2.65	□□□□□ -1.99
YLR140W	YLR140W	TUB1	P09733	447 aa	Known RBP	2.65	□□□□□ -1.99
YLR140W	YLR140W	GFA1	P14742	717 aa	Known RBP	2.65	□□□□□ -1.99
YLR140W	YLR140W	PPS1	P38148	807 aa		2.65	□□□□□ -1.99
YLR140W	YLR140W	TDP1	P38319	544 aa		2.65	□□□□□ -1.99
YLR140W	YLR140W	GLO1	P50107	326 aa		2.65	□□□□□ -1.99
YLR140W	YLR140W	MDM38	Q08179	573 aa		2.65	□□□□□ -1.99
YLR140W	YLR140W	WHI5	Q12416	295 aa		2.65	□□□□□ -1.99
YLR140W	YLR140W	SED4	P25365	1065 aa		2.64	□□□□□ -1.99
YLR140W	YLR140W	RAD27	P26793	382 aa		2.64	□□□□□ -1.99
YLR140W	YLR140W	YHL017W	P38745	532 aa		2.64	□□□□□ -1.99
YLR140W	YLR140W	SRT1	Q03175	343 aa		2.64	□□□□□ -1.99
YLR140W	YLR140W	MSC6	Q08818	692 aa	Known RBP	2.64	□□□□□ -1.99
YLR140W	YLR140W	YLL058W	Q12198	575 aa		2.64	□□□□□ -1.99
YLR140W	YLR140W	YKL151C	P36059	337 aa		2.63	□□□□□ -1.99
YLR140W	YLR140W	DAS1	P47005	663 aa		2.63	□□□□□ -1.99
YLR140W	YLR140W	ERG5	P54781	538 aa		2.63	□□□□□ -1.99
YLR140W	YLR140W	THI7	Q05998	598 aa		2.63	□□□□□ -1.99
YLR140W	YLR140W	FRE5	Q08908	694 aa		2.63	□□□□□ -1.99
YLR140W	YLR140W	CYC8	P14922	966 aa		2.62	□□□□□ -1.99
YLR140W	YLR140W	ILV6	P25605	309 aa	Known RBP	2.62	□□□□□ -1.99
YLR140W	YLR140W	FUN30	P31380	1131 aa		2.62	□□□□□ -1.99
YLR140W	YLR140W	STE14	P32584	239 aa		2.62	□□□□□ -1.99
YLR140W	YLR140W	FLO10	P36170	1169 aa		2.62	□□□□□ -1.99
YLR140W	YLR140W	GIC1	P38785	314 aa		2.62	□□□□□ -1.99
YLR140W	YLR140W	TAH11	P47112	604 aa		2.62	□□□□□ -1.99
YLR140W	YLR140W	HRQ1	Q05549	1077 aa		2.62	□□□□□ -1.99
YLR140W	YLR140W	HCA4	P20448	770 aa	Known RBP	2.61	□□□□□ -1.99
YLR140W	YLR140W	STM1	P39015	273 aa	Known RBP	2.61	□□□□□ -1.99
YLR140W	YLR140W	RPS26A	P39938	119 aa	Known RBP	2.61	□□□□□ -1.99
YLR140W	YLR140W	RPS26B	P39939	119 aa	Known RBP	2.61	□□□□□ -1.99
YLR140W	YLR140W	VPS73	P53142	486 aa	Known RBP	2.61	□□□□□ -1.99
YLR140W	YLR140W	SLU7	Q02775	382 aa	Known RBP	2.61	□□□□□ -1.99
YLR140W	YLR140W	CDC43	P18898	376 aa		2.6	□□□□□ -1.99
YLR140W	YLR140W	ARO10	Q06408	635 aa		2.6	□□□□□ -1.99
YLR140W	YLR140W	MET3	P08536	511 aa		2.59	□□□□□ -1.99
YLR140W	YLR140W	PEX19	Q07418	342 aa		2.59	□□□□□ -1.99
YLR140W	YLR140W	RTT10	Q08924	1013 aa		2.59	□□□□□ -1.99
YLR140W	YLR140W	MET6	P05694	767 aa	Known RBP	2.58	□□□□□ -2
YLR140W	YLR140W	SAH1	P39954	449 aa	Known RBP	2.58	□□□□□ -2
YLR140W	YLR140W	YIL166C	P40445	542 aa		2.58	□□□□□ -2
YLR140W	YLR140W	SCS3	P53012	380 aa		2.58	□□□□□ -2
YLR140W	YLR140W	SFB2	P53953	876 aa		2.58	□□□□□ -2
YLR140W	YLR140W	DLT1	Q04216	342 aa		2.58	□□□□□ -2
YLR140W	YLR140W	ADY4	Q05955	493 aa		2.58	□□□□□ -2
YLR140W	YLR140W	TMA46	Q12000	345 aa	Known RBP	2.58	□□□□□ -2
YLR140W	YLR140W	YPL066W	Q12194	479 aa		2.58	□□□□□ -2
YLR140W	YLR140W	INO1	P11986	533 aa		2.57	□□□□□ -2
YLR140W	YLR140W	RPC82	P32349	654 aa		2.57	□□□□□ -2
YLR140W	YLR140W	MOT2	P34909	587 aa	Known RBP	2.57	□□□□□ -2
YLR140W	YLR140W	NPP2	P39997	493 aa		2.57	□□□□□ -2
YLR140W	YLR140W	ELO3	P40319	345 aa		2.57	□□□□□ -2
YLR140W	YLR140W	RKM4	Q12504	494 aa		2.57	□□□□□ -2
YLR140W	YLR140W	KIN3	P22209	435 aa		2.56	□□□□□ -2
YLR140W	YLR140W	SEC21	P32074	935 aa	Known RBP	2.56	□□□□□ -2
YLR140W	YLR140W	LYP1	P32487	611 aa		2.56	□□□□□ -2
YLR140W	YLR140W	CTF13	P35203	478 aa		2.56	□□□□□ -2
YLR140W	YLR140W	SSF1	P38789	453 aa	Predicted RBP	2.56	□□□□□ -2
YLR140W	YLR140W	PCL5	P38794	229 aa		2.56	□□□□□ -2
YLR140W	YLR140W	YGL176C	P46945	554 aa		2.56	□□□□□ -2
YLR140W	YLR140W	RAI1	P53063	387 aa	Known RBP	2.56	□□□□□ -2
YLR140W	YLR140W	TRP2	P00899	507 aa	Known RBP	2.55	□□□□□ -2
YLR140W	YLR140W	CAF20	P12962	161 aa	Known RBP	2.55	□□□□□ -2
YLR140W	YLR140W	ADY2	P25613	283 aa		2.55	□□□□□ -2
YLR140W	YLR140W	YKL107W	P34251	309 aa		2.55	□□□□□ -2
YLR140W	YLR140W	YPR196W	Q06595	470 aa		2.55	□□□□□ -2
YLR140W	YLR140W	TRM11	Q12463	433 aa		2.55	□□□□□ -2
YLR140W	YLR140W	MCM2	P29469	868 aa		2.54	□□□□□ -2
YLR140W	YLR140W	TYW3	P53177	273 aa		2.54	□□□□□ -2
YLR140W	YLR140W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	2.54	□□□□□ -2	not detected
YLR140W	YLR140W	SEC20	P28791	383 aa		2.53	□□□□□ -2
YLR140W	YLR140W	GAT1	P43574	510 aa		2.53	□□□□□ -2
YLR140W	YLR140W	MUP1	P50276	574 aa		2.53	□□□□□ -2
YLR140W	YLR140W	SSL1	Q04673	461 aa	Predicted RBP	2.53	□□□□□ -2
YLR140W	YLR140W	CRR1	Q05790	422 aa		2.53	□□□□□ -2
YLR140W	YLR140W	SWM1	Q12379	170 aa		2.53	□□□□□ -2
YLR140W	YLR140W	YUR1	P26725	428 aa		2.52	□□□□□ -2.01
YLR140W	YLR140W	FKH2	P41813	862 aa		2.52	□□□□□ -2.01
YLR140W	YLR140W	SRP1	Q02821	542 aa	Known RBP	2.52	□□□□□ -2.01
YLR140W	YLR140W	NOT3	P06102	836 aa	Known RBP	2.51	□□□□□ -2.01
YLR140W	YLR140W	DMC1	P25453	334 aa		2.51	□□□□□ -2.01
YLR140W	YLR140W	IPL1	P38991	367 aa		2.51	□□□□□ -2.01
YLR140W	YLR140W	SNF7	P39929	240 aa	Known RBP	2.51	□□□□□ -2.01
YLR140W	YLR140W	GYP7	P48365	746 aa		2.51	□□□□□ -2.01
YLR140W	YLR140W	RIA1	P53893	1110 aa		2.51	□□□□□ -2.01
YLR140W	YLR140W	APM1	Q00776	475 aa	Predicted RBP	2.51	□□□□□ -2.01
YLR140W	YLR140W	SPR28	Q04921	423 aa		2.51	□□□□□ -2.01
YLR140W	YLR140W	YLR225C	Q05948	407 aa	Known RBP	2.51	□□□□□ -2.01
YLR140W	YLR140W	MRI1	Q06489	411 aa	Known RBP	2.51	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 32 ms