RNA–Protein interactions for RNA: YLR039C

RIC1, Transcript of Protein involved in retrograde transport to the cis-Golgi network, yeast

Gene RIC1, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIC1	YLR039C	PEX7	P39108	375 aa		2.71	□□□□□ -1.97
RIC1	YLR039C	OYE3	P41816	400 aa	Predicted RBP	2.71	□□□□□ -1.97
RIC1	YLR039C	YGL081W	P53156	320 aa		2.71	□□□□□ -1.97
RIC1	YLR039C	SDA1	P53313	767 aa	Known RBP	2.71	□□□□□ -1.97
RIC1	YLR039C	SDH1	Q00711	640 aa		2.71	□□□□□ -1.97
RIC1	YLR039C	PIK1	P39104	1066 aa		2.71	□□□□□ -1.98
RIC1	YLR039C	YER158C	P40095	573 aa		2.71	□□□□□ -1.98
RIC1	YLR039C	GYP7	P48365	746 aa		2.71	□□□□□ -1.98
RIC1	YLR039C	YKE2	P52553	114 aa		2.71	□□□□□ -1.98
RIC1	YLR039C	ALO1	P54783	526 aa	Known RBP	2.71	□□□□□ -1.98
RIC1	YLR039C	MET7	Q08645	548 aa		2.71	□□□□□ -1.98
RIC1	YLR039C	TMA17	Q12513	150 aa		2.71	□□□□□ -1.98
RIC1	YLR039C	COQ4	O13525	335 aa		2.71	□□□□□ -1.98
RIC1	YLR039C	YCL002C	P25565	263 aa		2.71	□□□□□ -1.98
RIC1	YLR039C	MCD4	P36051	919 aa		2.71	□□□□□ -1.98
RIC1	YLR039C	UME1	Q03010	460 aa		2.71	□□□□□ -1.98
RIC1	YLR039C	RSC58	Q07979	502 aa		2.71	□□□□□ -1.98
RIC1	YLR039C	RIB2	Q12362	591 aa	Known RBP	2.71	□□□□□ -1.98
RIC1	YLR039C	MGS1	P40151	587 aa		2.7	□□□□□ -1.98
RIC1	YLR039C	CCM1	P48237	864 aa	Predicted RBP	2.7	□□□□□ -1.98
RIC1	YLR039C	AIM14	P53109	570 aa		2.7	□□□□□ -1.98
RIC1	YLR039C	RCM1	P53972	490 aa		2.7	□□□□□ -1.98
RIC1	YLR039C	YMR187C	Q03236	431 aa		2.7	□□□□□ -1.98
RIC1	YLR039C	LRS4	Q04087	347 aa	Known RBP	2.7	□□□□□ -1.98
RIC1	YLR039C	SVS1	Q12254	260 aa		2.7	□□□□□ -1.98
RIC1	YLR039C	NUP145	P49687	1317 aa		2.7	□□□□□ -1.98
RIC1	YLR039C	SFL1	P20134	766 aa		2.7	□□□□□ -1.98
RIC1	YLR039C	MIH1	P23748	554 aa		2.7	□□□□□ -1.98
RIC1	YLR039C	PGM1	P33401	570 aa	Known RBP	2.7	□□□□□ -1.98
RIC1	YLR039C	EMC3	P36039	253 aa		2.7	□□□□□ -1.98
RIC1	YLR039C	TYS1	P36421	394 aa	Known RBP	2.7	□□□□□ -1.98
RIC1	YLR039C	CIT3	P43635	486 aa		2.7	□□□□□ -1.98
RIC1	YLR039C	YLL058W	Q12198	575 aa		2.7	□□□□□ -1.98
RIC1	YLR039C	GCD1	P09032	578 aa	Predicted RBP	2.69	□□□□□ -1.98
RIC1	YLR039C	GSY1	P23337	708 aa		2.69	□□□□□ -1.98
RIC1	YLR039C	CDC48	P25694	835 aa	Known RBP	2.69	□□□□□ -1.98
RIC1	YLR039C	AIM26	P32858	118 aa		2.69	□□□□□ -1.98
RIC1	YLR039C	ENP1	P38333	483 aa	Known RBP	2.69	□□□□□ -1.98
RIC1	YLR039C	GTS1	P40956	396 aa		2.69	□□□□□ -1.98
RIC1	YLR039C	GPP1	P41277	250 aa	Known RBP	2.69	□□□□□ -1.98
RIC1	YLR039C	ATP25	Q03153	612 aa		2.69	□□□□□ -1.98
RIC1	YLR039C	YOL057W	Q08225	711 aa		2.69	□□□□□ -1.98
RIC1	YLR039C	CCZ1	P38273	704 aa		2.69	□□□□□ -1.98
RIC1	YLR039C	SAF1	P38352	637 aa		2.69	□□□□□ -1.98
RIC1	YLR039C	PTC7	P38797	343 aa		2.69	□□□□□ -1.98
RIC1	YLR039C	HXT16	P47185	567 aa		2.69	□□□□□ -1.98
RIC1	YLR039C	TAD1	P53065	400 aa		2.69	□□□□□ -1.98
RIC1	YLR039C	TRE1	Q08919	783 aa		2.69	□□□□□ -1.98
RIC1	YLR039C	SRO9	P25567	434 aa	Known RBP	2.69	□□□□□ -1.98
RIC1	YLR039C	FUN30	P31380	1131 aa		2.69	□□□□□ -1.98
RIC1	YLR039C	MDL2	P33311	773 aa		2.69	□□□□□ -1.98
RIC1	YLR039C	YKR078W	P36158	585 aa	Known RBP	2.69	□□□□□ -1.98
RIC1	YLR039C	TAT1	P38085	619 aa		2.69	□□□□□ -1.98
RIC1	YLR039C	YAP1801	P38856	637 aa		2.69	□□□□□ -1.98
RIC1	YLR039C	CAF16	P43569	289 aa		2.69	□□□□□ -1.98
RIC1	YLR039C	PMT3	P47190	753 aa		2.69	□□□□□ -1.98
RIC1	YLR039C	YPL062W	Q02781	134 aa		2.69	□□□□□ -1.98
RIC1	YLR039C	MTQ2	Q03920	221 aa	Predicted RBP	2.69	□□□□□ -1.98
RIC1	YLR039C	YPR196W	Q06595	470 aa		2.69	□□□□□ -1.98
RIC1	YLR039C	YLR122C	Q12312	125 aa		2.69	□□□□□ -1.98
RIC1	YLR039C	DAL7	P21826	554 aa		2.68	□□□□□ -1.98
RIC1	YLR039C	RPD3	P32561	433 aa		2.68	□□□□□ -1.98
RIC1	YLR039C	ECM21	P38167	1117 aa	Known RBP	2.68	□□□□□ -1.98
RIC1	YLR039C	PCM1	P38628	557 aa	Known RBP	2.68	□□□□□ -1.98
RIC1	YLR039C	YJR096W	P47137	282 aa		2.68	□□□□□ -1.98
RIC1	YLR039C	SSY1	Q03770	852 aa		2.68	□□□□□ -1.98
RIC1	YLR039C	RSB1	Q08417	382 aa		2.68	□□□□□ -1.98
RIC1	YLR039C	FAP7	Q12055	197 aa	Predicted RBP	2.68	□□□□□ -1.98
RIC1	YLR039C	HMG1	P12683	1054 aa		2.68	□□□□□ -1.98
RIC1	YLR039C	PAF1	P38351	445 aa		2.68	□□□□□ -1.98
RIC1	YLR039C	SKN7	P38889	622 aa		2.68	□□□□□ -1.98
RIC1	YLR039C	HDA1	P53973	706 aa		2.68	□□□□□ -1.98
RIC1	YLR039C	YDR338C	Q05497	695 aa		2.68	□□□□□ -1.98
RIC1	YLR039C	ATG33	Q06485	197 aa		2.68	□□□□□ -1.98
RIC1	YLR039C	YPR053C	Q6Q5F3	151 aa		2.68	□□□□□ -1.98
RIC1	YLR039C	THS1	P04801	734 aa	Known RBP	2.67	□□□□□ -1.98
RIC1	YLR039C	EUG1	P32474	517 aa		2.67	□□□□□ -1.98
RIC1	YLR039C	RRT14	P40470	206 aa		2.67	□□□□□ -1.98
RIC1	YLR039C	CEP3	P40969	608 aa		2.67	□□□□□ -1.98
RIC1	YLR039C	UBC9	P50623	157 aa	Predicted RBP	2.67	□□□□□ -1.98
RIC1	YLR039C	DAM1	P53267	343 aa		2.67	□□□□□ -1.98
RIC1	YLR039C	YGR130C	P53278	816 aa		2.67	□□□□□ -1.98
RIC1	YLR039C	RTS3	P53289	263 aa		2.67	□□□□□ -1.98
RIC1	YLR039C	SSL1	Q04673	461 aa	Predicted RBP	2.67	□□□□□ -1.98
RIC1	YLR039C	OSW2	Q12202	724 aa		2.67	□□□□□ -1.98
RIC1	YLR039C	NOT3	P06102	836 aa	Known RBP	2.67	□□□□□ -1.98
RIC1	YLR039C	MPH2	P0CD99	609 aa		2.67	□□□□□ -1.98
RIC1	YLR039C	STO1	P34160	861 aa	Known RBP	2.67	□□□□□ -1.98
RIC1	YLR039C	PEX8	P53248	589 aa		2.67	□□□□□ -1.98
RIC1	YLR039C	YPL034W	Q03083	165 aa		2.67	□□□□□ -1.98
RIC1	YLR039C	MTC5	Q03897	1148 aa		2.67	□□□□□ -1.98
RIC1	YLR039C	YDR514C	Q04408	483 aa		2.67	□□□□□ -1.98
RIC1	YLR039C	CHS2	P14180	963 aa		2.67	□□□□□ -1.98
RIC1	YLR039C	URA1	P28272	314 aa	Predicted RBP	2.67	□□□□□ -1.98
RIC1	YLR039C	DAL3	P32459	195 aa		2.67	□□□□□ -1.98
RIC1	YLR039C	HOG1	P32485	435 aa		2.67	□□□□□ -1.98
RIC1	YLR039C	SRP101	P32916	621 aa		2.67	□□□□□ -1.98
RIC1	YLR039C	RFC5	P38251	354 aa		2.67	□□□□□ -1.98
RIC1	YLR039C	COG6	P53959	839 aa		2.67	□□□□□ -1.98
RIC1	YLR039C	SNP1	Q00916	300 aa	Predicted RBP	2.67	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms