RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeastyeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKG1YKR100C TIF35Q04067 274 aaKnown RBP8.13□□□□□ -1.11
SKG1YKR100C PUF4P25339 888 aaKnown RBP RIP-Chip data8.12□□□□□ -1.11not detected
SKG1YKR100C PIK1P39104 1066 aa8.12□□□□□ -1.11
SKG1YKR100C MRPL22P53881 309 aa8.12□□□□□ -1.11
SKG1YKR100C CDC34P14682 295 aa8.11□□□□□ -1.11
SKG1YKR100C RIA1P53893 1110 aa8.11□□□□□ -1.11
SKG1YKR100C RSB1Q08417 382 aa8.11□□□□□ -1.11
SKG1YKR100C MCM7P38132 845 aa8.1□□□□□ -1.11
SKG1YKR100C HNT2P49775 206 aa8.09□□□□□ -1.11
SKG1YKR100C EEB1Q02891 456 aa8.09□□□□□ -1.11
SKG1YKR100C NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.09□□□□□ -1.11not detected
SKG1YKR100C TRP2P00899 507 aaKnown RBP8.08□□□□□ -1.12
SKG1YKR100C MNR2P35724 969 aa8.08□□□□□ -1.12
SKG1YKR100C LYP1P32487 611 aa8.07□□□□□ -1.12
SKG1YKR100C ABZ1P37254 787 aaPredicted RBP8.07□□□□□ -1.12
SKG1YKR100C AIM3P38266 947 aaKnown RBP8.06□□□□□ -1.12
SKG1YKR100C SEC26P41810 973 aaKnown RBP8.06□□□□□ -1.12
SKG1YKR100C SNO2P53823 222 aa8.06□□□□□ -1.12
SKG1YKR100C GNT1Q12096 491 aa8.06□□□□□ -1.12
SKG1YKR100C TYW3P53177 273 aa8.05□□□□□ -1.12
SKG1YKR100C YLR278CQ05854 1341 aa8.04□□□□□ -1.12
SKG1YKR100C PRP45P28004 379 aaPredicted RBP8.04□□□□□ -1.12
SKG1YKR100C MOT2P34909 587 aaKnown RBP8.04□□□□□ -1.12
SKG1YKR100C MXR1P40029 184 aa8.04□□□□□ -1.12
SKG1YKR100C ENV11P53246 860 aa8.04□□□□□ -1.12
SKG1YKR100C INO1P11986 533 aa8.03□□□□□ -1.12
SKG1YKR100C PRP6P19735 899 aaPredicted RBP8.03□□□□□ -1.12
SKG1YKR100C BAS1P22035 811 aa8.03□□□□□ -1.12
SKG1YKR100C THI80P35202 319 aa8.03□□□□□ -1.12
SKG1YKR100C RPL11AP0C0W9 174 aaKnown RBP8.02□□□□□ -1.13
SKG1YKR100C PAM1P37304 830 aaKnown RBP8.02□□□□□ -1.13
SKG1YKR100C FAA4P47912 694 aaKnown RBP8.02□□□□□ -1.13
SKG1YKR100C YPL066WQ12194 479 aa8.02□□□□□ -1.13
SKG1YKR100C RPL11BQ3E757 174 aaPredicted RBP8.02□□□□□ -1.13
SKG1YKR100C ROM2P51862 1356 aaKnown RBP8.01□□□□□ -1.13
SKG1YKR100C DBP2P24783 546 aaKnown RBP8.01□□□□□ -1.13
SKG1YKR100C CYC1P00044 109 aaPredicted RBP8□□□□□ -1.13
SKG1YKR100C RFC5P38251 354 aa8□□□□□ -1.13
SKG1YKR100C RIM8P53179 542 aa8□□□□□ -1.13
SKG1YKR100C YGR053CP53234 283 aa8□□□□□ -1.13
SKG1YKR100C YLR225CQ05948 407 aaKnown RBP8□□□□□ -1.13
SKG1YKR100C YPL277CQ08989 487 aa8□□□□□ -1.13
SKG1YKR100C SVS1Q12254 260 aa8□□□□□ -1.13
SKG1YKR100C RAD9P14737 1309 aa8□□□□□ -1.13
SKG1YKR100C MAP1Q01662 387 aaKnown RBP RIP-Chip data7.99□□□□□ -1.13not detected
SKG1YKR100C GDE1Q02979 1223 aa7.99□□□□□ -1.13
SKG1YKR100C SPP382Q06411 708 aaPredicted RBP7.99□□□□□ -1.13
SKG1YKR100C PSK1P31374 1356 aa7.98□□□□□ -1.13
SKG1YKR100C SOD2P00447 233 aa7.98□□□□□ -1.13
SKG1YKR100C RPS13P05756 151 aaKnown RBP7.98□□□□□ -1.13
SKG1YKR100C PNT1P38969 423 aa7.98□□□□□ -1.13
SKG1YKR100C YGL176CP46945 554 aa7.98□□□□□ -1.13
SKG1YKR100C RSM24Q03976 319 aa7.98□□□□□ -1.13
SKG1YKR100C SGD1Q06132 899 aa7.98□□□□□ -1.13
SKG1YKR100C ACM1Q08981 209 aa7.98□□□□□ -1.13
SKG1YKR100C RKM4Q12504 494 aa7.98□□□□□ -1.13
SKG1YKR100C TY3B-IQ7LHG5 1498 aaKnown RBP7.98□□□□□ -1.13
SKG1YKR100C MAD1P40957 749 aa7.97□□□□□ -1.13
SKG1YKR100C SPO20Q04359 397 aa7.97□□□□□ -1.13
SKG1YKR100C JIP5Q06214 492 aaPredicted RBP7.97□□□□□ -1.13
SKG1YKR100C ESC2Q06340 456 aa7.97□□□□□ -1.13
SKG1YKR100C YOR352WQ08816 343 aa7.97□□□□□ -1.13
SKG1YKR100C RIB2Q12362 591 aaKnown RBP7.97□□□□□ -1.13
SKG1YKR100C CLN2P20438 545 aa7.96□□□□□ -1.14
SKG1YKR100C SLA2P33338 968 aa7.96□□□□□ -1.14
SKG1YKR100C YKL107WP34251 309 aa7.96□□□□□ -1.14
SKG1YKR100C LAM1P38851 1228 aa7.96□□□□□ -1.14
SKG1YKR100C VPS16Q03308 798 aa7.96□□□□□ -1.14
SKG1YKR100C PIN2Q12057 282 aa7.96□□□□□ -1.14
SKG1YKR100C SPT7P35177 1332 aa7.96□□□□□ -1.14
SKG1YKR100C BI4P03879 638 aa7.95□□□□□ -1.14
SKG1YKR100C CMP2P14747 604 aa7.95□□□□□ -1.14
SKG1YKR100C TOD6P34219 525 aa7.95□□□□□ -1.14
SKG1YKR100C GEM1P39722 662 aa7.95□□□□□ -1.14
SKG1YKR100C SVF1Q05515 481 aa7.95□□□□□ -1.14
SKG1YKR100C ATG13Q06628 738 aa7.95□□□□□ -1.14
SKG1YKR100C CTT1P06115 562 aa7.94□□□□□ -1.14
SKG1YKR100C SRM1P21827 482 aa7.94□□□□□ -1.14
SKG1YKR100C NAP1P25293 417 aaKnown RBP7.94□□□□□ -1.14
SKG1YKR100C SIP5P40210 489 aaKnown RBP7.94□□□□□ -1.14
SKG1YKR100C CWC24P53769 259 aa7.94□□□□□ -1.14
SKG1YKR100C PLB2Q03674 706 aa7.94□□□□□ -1.14
SKG1YKR100C ROT1Q03691 256 aa7.94□□□□□ -1.14
SKG1YKR100C YDR132CQ03900 495 aa7.94□□□□□ -1.14
SKG1YKR100C ESC8Q08119 714 aa7.94□□□□□ -1.14
SKG1YKR100C GAL10P04397 699 aa7.93□□□□□ -1.14
SKG1YKR100C ACE2P21192 770 aa7.93□□□□□ -1.14
SKG1YKR100C APL1P27351 700 aa7.93□□□□□ -1.14
SKG1YKR100C ABD1P32783 436 aaPredicted RBP7.93□□□□□ -1.14
SKG1YKR100C MEF2P39677 819 aa7.93□□□□□ -1.14
SKG1YKR100C SNU71P53207 620 aaKnown RBP7.93□□□□□ -1.14
SKG1YKR100C KIN2P13186 1147 aaKnown RBP7.92□□□□□ -1.14
SKG1YKR100C YEF3P16521 1044 aaKnown RBP7.92□□□□□ -1.14
SKG1YKR100C TAF1P46677 1066 aa7.92□□□□□ -1.14
SKG1YKR100C FLR1P38124 548 aa7.91□□□□□ -1.14
SKG1YKR100C GCN5Q03330 439 aa7.91□□□□□ -1.14
SKG1YKR100C VTS1Q08831 523 aaKnown RBP RIP-Chip data7.91□□□□□ -1.14not detected
SKG1YKR100C FAL1Q12099 399 aaKnown RBP7.91□□□□□ -1.14
SKG1YKR100C YRF1-3P0CX14 1859 aa7.91□□□□□ -1.14
SKG1YKR100C YRF1-7P0CX15 1859 aa7.91□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 63.3 ms