RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C CIT1P00890 479 aa4.8□□□□□ -1.64
SRP40YKR092C BI4P03879 638 aa4.8□□□□□ -1.64
SRP40YKR092C RSP5P39940 809 aaKnown RBP4.8□□□□□ -1.64
SRP40YKR092C HUL4P40985 892 aa4.8□□□□□ -1.64
SRP40YKR092C ENV11P53246 860 aa4.8□□□□□ -1.64
SRP40YKR092C SVS1Q12254 260 aa4.8□□□□□ -1.64
SRP40YKR092C LPX1Q12405 387 aaKnown RBP4.8□□□□□ -1.64
SRP40YKR092C YPK9Q12697 1472 aa4.8□□□□□ -1.64
SRP40YKR092C ADE8P04161 214 aa4.79□□□□□ -1.64
SRP40YKR092C HSC82P15108 705 aaKnown RBP4.79□□□□□ -1.64
SRP40YKR092C PPH3P32345 308 aa4.79□□□□□ -1.64
SRP40YKR092C CDC11P32458 415 aa4.79□□□□□ -1.64
SRP40YKR092C HBS1P32769 611 aaKnown RBP4.79□□□□□ -1.64
SRP40YKR092C SCT1P32784 759 aa4.79□□□□□ -1.64
SRP40YKR092C YKL151CP36059 337 aa4.79□□□□□ -1.64
SRP40YKR092C SEC26P41810 973 aaKnown RBP4.79□□□□□ -1.64
SRP40YKR092C MPP10P47083 593 aaKnown RBP4.79□□□□□ -1.64
SRP40YKR092C PRP43P53131 767 aaKnown RBP4.79□□□□□ -1.64
SRP40YKR092C HRQ1Q05549 1077 aa4.79□□□□□ -1.64
SRP40YKR092C ATG13Q06628 738 aa4.79□□□□□ -1.64
SRP40YKR092C MYO4P32492 1471 aa4.79□□□□□ -1.64
SRP40YKR092C BUD4P47136 1447 aa4.79□□□□□ -1.64
SRP40YKR092C ECM5Q03214 1411 aa4.79□□□□□ -1.64
SRP40YKR092C BPT1P14772 1559 aa4.78□□□□□ -1.64
SRP40YKR092C ACE2P21192 770 aa4.78□□□□□ -1.64
SRP40YKR092C PBP2P38151 413 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
SRP40YKR092C RFC5P38251 354 aa4.78□□□□□ -1.64
SRP40YKR092C GGA2P38817 585 aaKnown RBP4.78□□□□□ -1.64
SRP40YKR092C CCC2P38995 1004 aa4.78□□□□□ -1.64
SRP40YKR092C CHZ1P40019 153 aaPredicted RBP4.78□□□□□ -1.64
SRP40YKR092C RRT14P40470 206 aa4.78□□□□□ -1.64
SRP40YKR092C MTC3P53077 123 aa4.78□□□□□ -1.64
SRP40YKR092C ORC3P54790 616 aa4.78□□□□□ -1.64
SRP40YKR092C MAP1Q01662 387 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
SRP40YKR092C TLG1Q03322 224 aa4.78□□□□□ -1.64
SRP40YKR092C CDA2Q06703 312 aa4.78□□□□□ -1.64
SRP40YKR092C YLL058WQ12198 575 aa4.78□□□□□ -1.64
SRP40YKR092C DNA2P38859 1522 aa4.77□□□□□ -1.65
SRP40YKR092C YOR1P53049 1477 aa4.77□□□□□ -1.65
SRP40YKR092C GAL11P19659 1081 aa4.77□□□□□ -1.65
SRP40YKR092C CDC12P32468 407 aaKnown RBP4.77□□□□□ -1.65
SRP40YKR092C TSA1P34760 196 aaKnown RBP4.77□□□□□ -1.65
SRP40YKR092C YRO2P38079 344 aa4.77□□□□□ -1.65
SRP40YKR092C YBR284WP38150 797 aa4.77□□□□□ -1.65
SRP40YKR092C BUD6P41697 788 aa4.77□□□□□ -1.65
SRP40YKR092C TCB2P48231 1178 aa4.77□□□□□ -1.65
SRP40YKR092C YDL124WQ07551 312 aaKnown RBP4.77□□□□□ -1.65
SRP40YKR092C MDM38Q08179 573 aa4.77□□□□□ -1.65
SRP40YKR092C HBN1Q96VH4 193 aa4.77□□□□□ -1.65
SRP40YKR092C SCC2Q04002 1493 aa4.76□□□□□ -1.65
SRP40YKR092C CAN1P04817 590 aa4.76□□□□□ -1.65
SRP40YKR092C CIT2P08679 460 aa4.76□□□□□ -1.65
SRP40YKR092C APL1P27351 700 aa4.76□□□□□ -1.65
SRP40YKR092C ABZ1P37254 787 aaPredicted RBP4.76□□□□□ -1.65
SRP40YKR092C SIT1P39980 628 aa4.76□□□□□ -1.65
SRP40YKR092C RPT2P40327 437 aaKnown RBP4.76□□□□□ -1.65
SRP40YKR092C HOS4P40480 1083 aa4.76□□□□□ -1.65
SRP40YKR092C ATG36P46983 293 aa4.76□□□□□ -1.65
SRP40YKR092C RSM24Q03976 319 aa4.76□□□□□ -1.65
SRP40YKR092C YPR071WQ12346 211 aa4.76□□□□□ -1.65
SRP40YKR092C KIN2P13186 1147 aaKnown RBP4.75□□□□□ -1.65
SRP40YKR092C SRT1Q03175 343 aa4.75□□□□□ -1.65
SRP40YKR092C TAF8Q03750 510 aa4.75□□□□□ -1.65
SRP40YKR092C PPM2Q08282 695 aa4.75□□□□□ -1.65
SRP40YKR092C OSW2Q12202 724 aa4.75□□□□□ -1.65
SRP40YKR092C SMC4Q12267 1418 aa4.74□□□□□ -1.65
SRP40YKR092C NUP82P40368 713 aa4.74□□□□□ -1.65
SRP40YKR092C HFM1P51979 1187 aa4.74□□□□□ -1.65
SRP40YKR092C RNH70P53331 553 aa4.74□□□□□ -1.65
SRP40YKR092C NPL3Q01560 414 aaKnown RBP RIP-Chip data4.74□□□□□ -1.65not detected
SRP40YKR092C LCD1Q04377 747 aa4.74□□□□□ -1.65
SRP40YKR092C RKR1Q04781 1562 aa4.74□□□□□ -1.65
SRP40YKR092C SSM4P40318 1319 aa4.73□□□□□ -1.65
SRP40YKR092C NUP170P38181 1502 aa4.73□□□□□ -1.65
SRP40YKR092C TOP3P13099 656 aa4.73□□□□□ -1.65
SRP40YKR092C YCR015CP25616 317 aa4.73□□□□□ -1.65
SRP40YKR092C FUN30P31380 1131 aa4.73□□□□□ -1.65
SRP40YKR092C TIM23P32897 222 aa4.73□□□□□ -1.65
SRP40YKR092C DOM34P33309 386 aa4.73□□□□□ -1.65
SRP40YKR092C YKL222CP35995 705 aa4.73□□□□□ -1.65
SRP40YKR092C BET3P36149 193 aa4.73□□□□□ -1.65
SRP40YKR092C ETP1P38748 585 aaKnown RBP4.73□□□□□ -1.65
SRP40YKR092C TY4A-JP47023 414 aa4.73□□□□□ -1.65
SRP40YKR092C GYP7P48365 746 aa4.73□□□□□ -1.65
SRP40YKR092C RTA1P53047 317 aa4.73□□□□□ -1.65
SRP40YKR092C ESC8Q08119 714 aa4.73□□□□□ -1.65
SRP40YKR092C NPP1P25353 742 aa4.72□□□□□ -1.65
SRP40YKR092C PPG1P32838 368 aa4.72□□□□□ -1.65
SRP40YKR092C AFR1P33304 620 aa4.72□□□□□ -1.65
SRP40YKR092C PET10P36139 283 aa4.72□□□□□ -1.65
SRP40YKR092C YKR078WP36158 585 aaKnown RBP4.72□□□□□ -1.65
SRP40YKR092C GIC1P38785 314 aa4.72□□□□□ -1.65
SRP40YKR092C UBP6P43593 499 aaKnown RBP4.72□□□□□ -1.65
SRP40YKR092C YPR196WQ06595 470 aa4.72□□□□□ -1.65
SRP40YKR092C XYL2Q07993 356 aa4.72□□□□□ -1.65
SRP40YKR092C STH1P32597 1359 aa4.72□□□□□ -1.65
SRP40YKR092C ATG2P53855 1592 aa4.72□□□□□ -1.65
SRP40YKR092C SNQ2P32568 1501 aaKnown RBP4.72□□□□□ -1.65
SRP40YKR092C CYC1P00044 109 aaPredicted RBP4.71□□□□□ -1.66
SRP40YKR092C TOM70P07213 617 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms