RNA–Protein interactions for RNA: YKR050W

TRK2, Transcript of Component of the Trk1p-Trk2p potassium transport system, yeast

Gene TRK2, Length 2,670 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRK2	YKR050W	APL1	P27351	700 aa		6.01	□□□□□ -1.45
TRK2	YKR050W	VPS35	P34110	944 aa		6.01	□□□□□ -1.45
TRK2	YKR050W	PGM2	P37012	569 aa	Known RBP	6.01	□□□□□ -1.45
TRK2	YKR050W	SHM1	P37292	490 aa	Predicted RBP	6.01	□□□□□ -1.45
TRK2	YKR050W	STR2	P47164	639 aa		6.01	□□□□□ -1.45
TRK2	YKR050W	CUR1	Q06469	252 aa		6.01	□□□□□ -1.45
TRK2	YKR050W	YLL058W	Q12198	575 aa		6.01	□□□□□ -1.45
TRK2	YKR050W	SWI6	P09959	803 aa		6.01	□□□□□ -1.45
TRK2	YKR050W	SSB1	P11484	613 aa	Known RBP	6.01	□□□□□ -1.45
TRK2	YKR050W	PHO8	P11491	566 aa		6.01	□□□□□ -1.45
TRK2	YKR050W	TRK2	P28584	889 aa		6.01	□□□□□ -1.45
TRK2	YKR050W	EFM2	P38347	419 aa		6.01	□□□□□ -1.45
TRK2	YKR050W	YEL025C	P39991	1188 aa		6.01	□□□□□ -1.45
TRK2	YKR050W	SSB2	P40150	613 aa	Known RBP	6.01	□□□□□ -1.45
TRK2	YKR050W	GPI13	Q07830	1017 aa		6.01	□□□□□ -1.45
TRK2	YKR050W	NOC3	Q07896	663 aa	Predicted RBP	6.01	□□□□□ -1.45
TRK2	YKR050W	PLP2	Q12017	286 aa		6.01	□□□□□ -1.45
TRK2	YKR050W	APL4	Q12028	832 aa		6.01	□□□□□ -1.45
TRK2	YKR050W	RRP43	P25359	394 aa	Predicted RBP	6	□□□□□ -1.45
TRK2	YKR050W	RGT1	P32862	1170 aa		6	□□□□□ -1.45
TRK2	YKR050W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	6	□□□□□ -1.45	not detected
TRK2	YKR050W	ENV11	P53246	860 aa		6	□□□□□ -1.45
TRK2	YKR050W	MDR1	P53258	950 aa		6	□□□□□ -1.45
TRK2	YKR050W	CWC2	Q12046	339 aa	Predicted RBP	6	□□□□□ -1.45
TRK2	YKR050W	TRM11	Q12463	433 aa		6	□□□□□ -1.45
TRK2	YKR050W	TIF6	Q12522	245 aa	Known RBP	6	□□□□□ -1.45
TRK2	YKR050W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	6	□□□□□ -1.45	not detected
TRK2	YKR050W	YSC83	P32792	385 aa		6	□□□□□ -1.45
TRK2	YKR050W	MOT2	P34909	587 aa	Known RBP	6	□□□□□ -1.45
TRK2	YKR050W	DBP7	P36120	742 aa	Known RBP	6	□□□□□ -1.45
TRK2	YKR050W	SMC3	P47037	1230 aa		6	□□□□□ -1.45
TRK2	YKR050W	COS5	P47187	383 aa		6	□□□□□ -1.45
TRK2	YKR050W	ARK1	P53974	638 aa		6	□□□□□ -1.45
TRK2	YKR050W	VPS38	Q05919	439 aa		6	□□□□□ -1.45
TRK2	YKR050W	MET7	Q08645	548 aa		6	□□□□□ -1.45
TRK2	YKR050W	HMI1	Q12039	706 aa		6	□□□□□ -1.45
TRK2	YKR050W	YEL1	P34225	687 aa		5.99	□□□□□ -1.45
TRK2	YKR050W	PXL1	P36166	706 aa		5.99	□□□□□ -1.45
TRK2	YKR050W	SMC2	P38989	1170 aa	Known RBP	5.99	□□□□□ -1.45
TRK2	YKR050W	VFA1	P40080	203 aa		5.99	□□□□□ -1.45
TRK2	YKR050W	HFM1	P51979	1187 aa		5.99	□□□□□ -1.45
TRK2	YKR050W	UME1	Q03010	460 aa		5.99	□□□□□ -1.45
TRK2	YKR050W	YMR321C	Q04898	105 aa		5.99	□□□□□ -1.45
TRK2	YKR050W	YLR225C	Q05948	407 aa	Known RBP	5.99	□□□□□ -1.45
TRK2	YKR050W	MLH2	Q07980	695 aa		5.99	□□□□□ -1.45
TRK2	YKR050W	NCR1	Q12200	1170 aa		5.99	□□□□□ -1.45
TRK2	YKR050W	YDR461C-A	Q2V2P7	80 aa		5.99	□□□□□ -1.45
TRK2	YKR050W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.99	□□□□□ -1.45	not detected
TRK2	YKR050W	ETP1	P38748	585 aa	Known RBP	5.99	□□□□□ -1.45
TRK2	YKR050W	MXR1	P40029	184 aa		5.99	□□□□□ -1.45
TRK2	YKR050W	YAP5	P40574	245 aa		5.99	□□□□□ -1.45
TRK2	YKR050W	RPS7B	P48164	190 aa	Known RBP	5.99	□□□□□ -1.45
TRK2	YKR050W	UTP5	Q04177	643 aa	Known RBP	5.99	□□□□□ -1.45
TRK2	YKR050W	YOL098C	Q12496	1037 aa		5.99	□□□□□ -1.45
TRK2	YKR050W	DED1	P06634	604 aa	Known RBP	5.98	□□□□□ -1.45
TRK2	YKR050W	CHS2	P14180	963 aa		5.98	□□□□□ -1.45
TRK2	YKR050W	COT1	P32798	439 aa		5.98	□□□□□ -1.45
TRK2	YKR050W	XRS2	P33301	854 aa		5.98	□□□□□ -1.45
TRK2	YKR050W	NIP100	P33420	868 aa		5.98	□□□□□ -1.45
TRK2	YKR050W	PCH2	P38126	564 aa		5.98	□□□□□ -1.45
TRK2	YKR050W	ERC1	P38767	581 aa		5.98	□□□□□ -1.45
TRK2	YKR050W	CAJ1	P39101	391 aa		5.98	□□□□□ -1.45
TRK2	YKR050W	UBP5	P39944	805 aa		5.98	□□□□□ -1.45
TRK2	YKR050W	EAF5	P39995	279 aa		5.98	□□□□□ -1.45
TRK2	YKR050W	PSP2	P50109	593 aa	Known RBP	5.98	□□□□□ -1.45
TRK2	YKR050W	OSW2	Q12202	724 aa		5.98	□□□□□ -1.45
TRK2	YKR050W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.98	□□□□□ -1.45	not detected
TRK2	YKR050W	YUR1	P26725	428 aa		5.98	□□□□□ -1.45
TRK2	YKR050W	IRE1	P32361	1115 aa		5.98	□□□□□ -1.45
TRK2	YKR050W	ATG3	P40344	310 aa		5.98	□□□□□ -1.45
TRK2	YKR050W	AVT1	P47082	602 aa		5.98	□□□□□ -1.45
TRK2	YKR050W	ROD1	Q02805	837 aa		5.98	□□□□□ -1.45
TRK2	YKR050W	OPY2	Q06810	360 aa		5.98	□□□□□ -1.45
TRK2	YKR050W	YPR078C	Q06813	372 aa		5.98	□□□□□ -1.45
TRK2	YKR050W	RLP24	Q07915	199 aa	Known RBP	5.98	□□□□□ -1.45
TRK2	YKR050W	MTF2	P10849	440 aa		5.97	□□□□□ -1.45
TRK2	YKR050W	NAM7	P30771	971 aa	Known RBP	5.97	□□□□□ -1.45
TRK2	YKR050W	TIM23	P32897	222 aa		5.97	□□□□□ -1.45
TRK2	YKR050W	CAF130	P53280	1122 aa	Predicted RBP	5.97	□□□□□ -1.45
TRK2	YKR050W	RTT102	P53330	157 aa		5.97	□□□□□ -1.45
TRK2	YKR050W	ALF1	P53904	254 aa		5.97	□□□□□ -1.45
TRK2	YKR050W	ERG5	P54781	538 aa		5.97	□□□□□ -1.45
TRK2	YKR050W	SPO12	P17123	173 aa		5.97	□□□□□ -1.45
TRK2	YKR050W	PET123	P17558	318 aa		5.97	□□□□□ -1.45
TRK2	YKR050W	SMC1	P32908	1225 aa		5.97	□□□□□ -1.45
TRK2	YKR050W	KTR2	P33550	425 aa		5.97	□□□□□ -1.45
TRK2	YKR050W	SHQ1	P40486	507 aa	Predicted RBP	5.97	□□□□□ -1.45
TRK2	YKR050W	APT1	P49435	187 aa	Known RBP	5.97	□□□□□ -1.45
TRK2	YKR050W	TAM41	P53230	385 aa		5.97	□□□□□ -1.45
TRK2	YKR050W	TIM8	P57744	87 aa		5.97	□□□□□ -1.45
TRK2	YKR050W	COQ9	Q05779	260 aa		5.97	□□□□□ -1.45
TRK2	YKR050W	NEW1	Q08972	1196 aa	Known RBP	5.97	□□□□□ -1.45
TRK2	YKR050W	FAL1	Q12099	399 aa	Known RBP	5.97	□□□□□ -1.45
TRK2	YKR050W	LCB2	P40970	561 aa		5.96	□□□□□ -1.45
TRK2	YKR050W	IES1	P43579	692 aa		5.96	□□□□□ -1.45
TRK2	YKR050W	DON1	Q05610	365 aa		5.96	□□□□□ -1.45
TRK2	YKR050W	YLR297W	Q05899	129 aa		5.96	□□□□□ -1.45
TRK2	YKR050W	PPR1	P07272	904 aa	Predicted RBP	5.96	□□□□□ -1.46
TRK2	YKR050W	POX1	P13711	748 aa		5.96	□□□□□ -1.46
TRK2	YKR050W	PDC6	P26263	563 aa	Known RBP	5.96	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 179.2 ms