RNA–Protein interactions for RNA: YKL150W

MCR1, Transcript of Mitochondrial NADH-cytochrome b5 reductase, yeast

Gene MCR1, Length 909 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MCR1	YKL150W	CDA1	Q06702	301 aa		4.2	□□□□□ -1.74
MCR1	YKL150W	URM1	P40554	99 aa	Predicted RBP	4.19	□□□□□ -1.74
MCR1	YKL150W	EXG2	P52911	562 aa		4.19	□□□□□ -1.74
MCR1	YKL150W	SUN4	P53616	420 aa		4.19	□□□□□ -1.74
MCR1	YKL150W	SHE9	Q04172	456 aa		4.19	□□□□□ -1.74
MCR1	YKL150W	ENB1	Q08299	606 aa		4.19	□□□□□ -1.74
MCR1	YKL150W	GUP2	Q08929	609 aa		4.19	□□□□□ -1.74
MCR1	YKL150W	PIN2	Q12057	282 aa		4.19	□□□□□ -1.74
MCR1	YKL150W	SPE1	P08432	466 aa		4.18	□□□□□ -1.74
MCR1	YKL150W	PFK1	P16861	987 aa	Known RBP	4.18	□□□□□ -1.74
MCR1	YKL150W	ABD1	P32783	436 aa	Predicted RBP	4.18	□□□□□ -1.74
MCR1	YKL150W	GIC1	P38785	314 aa		4.18	□□□□□ -1.74
MCR1	YKL150W	SNU71	P53207	620 aa	Known RBP	4.18	□□□□□ -1.74
MCR1	YKL150W	CWC24	P53769	259 aa		4.18	□□□□□ -1.74
MCR1	YKL150W	AIM39	Q08223	395 aa		4.18	□□□□□ -1.74
MCR1	YKL150W	FAL1	Q12099	399 aa	Known RBP	4.18	□□□□□ -1.74
MCR1	YKL150W	CDC12	P32468	407 aa	Known RBP	4.17	□□□□□ -1.74
MCR1	YKL150W	YKR078W	P36158	585 aa	Known RBP	4.17	□□□□□ -1.74
MCR1	YKL150W	GYP7	P48365	746 aa		4.17	□□□□□ -1.74
MCR1	YKL150W	VPS16	Q03308	798 aa		4.17	□□□□□ -1.74
MCR1	YKL150W	TAD3	Q9URQ3	322 aa		4.17	□□□□□ -1.74
MCR1	YKL150W	SRP101	P32916	621 aa		4.16	□□□□□ -1.74
MCR1	YKL150W	MSS4	P38994	779 aa		4.16	□□□□□ -1.74
MCR1	YKL150W	NCS6	P53088	359 aa		4.16	□□□□□ -1.74
MCR1	YKL150W	SLI1	P53304	468 aa		4.16	□□□□□ -1.74
MCR1	YKL150W	KCS1	Q12494	1050 aa		4.16	□□□□□ -1.74
MCR1	YKL150W	CHS7	P38843	316 aa		4.15	□□□□□ -1.75
MCR1	YKL150W	MBP1	P39678	833 aa		4.15	□□□□□ -1.75
MCR1	YKL150W	DUS3	Q06053	668 aa	Known RBP	4.15	□□□□□ -1.75
MCR1	YKL150W	ESC2	Q06340	456 aa		4.15	□□□□□ -1.75
MCR1	YKL150W	OPI10	Q08202	246 aa		4.15	□□□□□ -1.75
MCR1	YKL150W	NPC2	Q12408	173 aa		4.15	□□□□□ -1.75
MCR1	YKL150W	ADE8	P04161	214 aa		4.14	□□□□□ -1.75
MCR1	YKL150W	VBA5	P36172	582 aa		4.14	□□□□□ -1.75
MCR1	YKL150W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
MCR1	YKL150W	TPO2	P53283	614 aa		4.14	□□□□□ -1.75
MCR1	YKL150W	YPR196W	Q06595	470 aa		4.14	□□□□□ -1.75
MCR1	YKL150W	CDC48	P25694	835 aa	Known RBP	4.13	□□□□□ -1.75
MCR1	YKL150W	HRR25	P29295	494 aa	Known RBP	4.13	□□□□□ -1.75
MCR1	YKL150W	MRP8	P35719	219 aa		4.13	□□□□□ -1.75
MCR1	YKL150W	PBY1	P38254	753 aa		4.13	□□□□□ -1.75
MCR1	YKL150W	YER158C	P40095	573 aa		4.13	□□□□□ -1.75
MCR1	YKL150W	KIN4	Q01919	800 aa		4.13	□□□□□ -1.75
MCR1	YKL150W	PPH3	P32345	308 aa		4.12	□□□□□ -1.75
MCR1	YKL150W	IRR1	P40541	1150 aa		4.12	□□□□□ -1.75
MCR1	YKL150W	RAI1	P53063	387 aa	Known RBP	4.12	□□□□□ -1.75
MCR1	YKL150W	SFB2	P53953	876 aa		4.12	□□□□□ -1.75
MCR1	YKL150W	JIP5	Q06214	492 aa	Predicted RBP	4.12	□□□□□ -1.75
MCR1	YKL150W	RAD53	P22216	821 aa		4.11	□□□□□ -1.75
MCR1	YKL150W	SED4	P25365	1065 aa		4.11	□□□□□ -1.75
MCR1	YKL150W	KAR4	P25583	335 aa		4.11	□□□□□ -1.75
MCR1	YKL150W	EFT1	P32324	842 aa	Known RBP	4.11	□□□□□ -1.75
MCR1	YKL150W	KTR4	P38131	464 aa		4.11	□□□□□ -1.75
MCR1	YKL150W	YBR238C	P38330	731 aa	Known RBP	4.11	□□□□□ -1.75
MCR1	YKL150W	TSL1	P38427	1098 aa	Known RBP	4.11	□□□□□ -1.75
MCR1	YKL150W	SIT1	P39980	628 aa		4.11	□□□□□ -1.75
MCR1	YKL150W	NPP2	P39997	493 aa		4.11	□□□□□ -1.75
MCR1	YKL150W	YKE2	P52553	114 aa		4.11	□□□□□ -1.75
MCR1	YKL150W	VPS30	Q02948	557 aa		4.11	□□□□□ -1.75
MCR1	YKL150W	YDR306C	Q06640	478 aa		4.11	□□□□□ -1.75
MCR1	YKL150W	UPC2	Q12151	913 aa		4.11	□□□□□ -1.75
MCR1	YKL150W	AAR2	P32357	355 aa	Predicted RBP	4.1	□□□□□ -1.75
MCR1	YKL150W	OAR1	P35731	278 aa		4.1	□□□□□ -1.75
MCR1	YKL150W	PAM1	P37304	830 aa	Known RBP	4.1	□□□□□ -1.75
MCR1	YKL150W	TRP4	P07285	380 aa	Predicted RBP	4.09	□□□□□ -1.75
MCR1	YKL150W	CCM1	P48237	864 aa	Predicted RBP	4.09	□□□□□ -1.75
MCR1	YKL150W	IOC4	Q04213	475 aa		4.09	□□□□□ -1.75
MCR1	YKL150W	WHI4	Q07655	649 aa	Known RBP	4.09	□□□□□ -1.75
MCR1	YKL150W	NOT3	P06102	836 aa	Known RBP	4.08	□□□□□ -1.76
MCR1	YKL150W	PRP9	P19736	530 aa	Known RBP	4.08	□□□□□ -1.76
MCR1	YKL150W	CAD1	P24813	409 aa	Known RBP	4.08	□□□□□ -1.76
MCR1	YKL150W	STE13	P33894	931 aa		4.08	□□□□□ -1.76
MCR1	YKL150W	LAS17	Q12446	633 aa		4.08	□□□□□ -1.76
MCR1	YKL150W	PRI2	P20457	528 aa		4.07	□□□□□ -1.76
MCR1	YKL150W	CDC11	P32458	415 aa		4.07	□□□□□ -1.76
MCR1	YKL150W	STE14	P32584	239 aa		4.07	□□□□□ -1.76
MCR1	YKL150W	YKL069W	P36088	180 aa		4.07	□□□□□ -1.76
MCR1	YKL150W	YRO2	P38079	344 aa		4.07	□□□□□ -1.76
MCR1	YKL150W	MOH1	P38191	138 aa		4.07	□□□□□ -1.76
MCR1	YKL150W	VAC8	P39968	578 aa		4.07	□□□□□ -1.76
MCR1	YKL150W	YOL073C	Q08232	322 aa		4.07	□□□□□ -1.76
MCR1	YKL150W	PPM2	Q08282	695 aa		4.07	□□□□□ -1.76
MCR1	YKL150W	FBP1	P09201	348 aa		4.06	□□□□□ -1.76
MCR1	YKL150W	ERG4	P25340	473 aa		4.06	□□□□□ -1.76
MCR1	YKL150W	SUL1	P38359	859 aa		4.06	□□□□□ -1.76
MCR1	YKL150W	SPF1	P39986	1215 aa	Known RBP	4.06	□□□□□ -1.76
MCR1	YKL150W	UBA2	P52488	636 aa		4.06	□□□□□ -1.76
MCR1	YKL150W	LCD1	Q04377	747 aa		4.06	□□□□□ -1.76
MCR1	YKL150W	RFA1	P22336	621 aa	Known RBP	4.05	□□□□□ -1.76
MCR1	YKL150W	NPP1	P25353	742 aa		4.05	□□□□□ -1.76
MCR1	YKL150W	BUL1	P48524	976 aa		4.05	□□□□□ -1.76
MCR1	YKL150W	TIM44	Q01852	431 aa		4.05	□□□□□ -1.76
MCR1	YKL150W	RNT1	Q02555	471 aa		4.05	□□□□□ -1.76
MCR1	YKL150W	TDA5	Q06417	326 aa	Known RBP	4.05	□□□□□ -1.76
MCR1	YKL150W	YLR040C	Q07988	224 aa		4.05	□□□□□ -1.76
MCR1	YKL150W	AFR1	P33304	620 aa		4.04	□□□□□ -1.76
MCR1	YKL150W	REC104	P33323	182 aa		4.04	□□□□□ -1.76
MCR1	YKL150W	SDP1	P40479	209 aa		4.04	□□□□□ -1.76
MCR1	YKL150W	ALD6	P54115	500 aa	Known RBP	4.04	□□□□□ -1.76
MCR1	YKL150W	PEX19	Q07418	342 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms