RNA–Protein interactions for RNA: YKL027W

TCD2, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD2, Length 1,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD2YKL027W OM45P16547 393 aa12.83□□□□□ -0.36
TCD2YKL027W SDH2P21801 266 aa12.83□□□□□ -0.36
TCD2YKL027W YSC83P32792 385 aa12.83□□□□□ -0.36
TCD2YKL027W YKL091CP33324 310 aaKnown RBP12.83□□□□□ -0.36
TCD2YKL027W ADE17P38009 592 aaKnown RBP12.83□□□□□ -0.36
TCD2YKL027W GUA1P38625 525 aaKnown RBP12.83□□□□□ -0.36
TCD2YKL027W YGR237CP50089 785 aa12.83□□□□□ -0.36
TCD2YKL027W TCO89Q08921 799 aa12.83□□□□□ -0.36
TCD2YKL027W HIF1Q12373 385 aa12.83□□□□□ -0.36
TCD2YKL027W NBP1P52919 319 aaPredicted RBP12.82□□□□□ -0.36
TCD2YKL027W LCD1Q04377 747 aa12.82□□□□□ -0.36
TCD2YKL027W HFI1Q12060 488 aa12.82□□□□□ -0.36
TCD2YKL027W MAK16P10962 306 aaPredicted RBP12.81□□□□□ -0.36
TCD2YKL027W MRF1P30775 413 aaPredicted RBP12.81□□□□□ -0.36
TCD2YKL027W BIM1P40013 344 aa12.81□□□□□ -0.36
TCD2YKL027W ECM30Q06673 1274 aa12.81□□□□□ -0.36
TCD2YKL027W MED1Q12321 566 aa12.81□□□□□ -0.36
TCD2YKL027W HEM1P09950 548 aaPredicted RBP12.8□□□□□ -0.36
TCD2YKL027W PHO8P11491 566 aa12.8□□□□□ -0.36
TCD2YKL027W CLC1P17891 233 aa12.8□□□□□ -0.36
TCD2YKL027W MSS51P32335 436 aa12.8□□□□□ -0.36
TCD2YKL027W DUR3P33413 735 aa12.8□□□□□ -0.36
TCD2YKL027W MRPL10P36520 322 aa12.8□□□□□ -0.36
TCD2YKL027W TFG2P41896 400 aaPredicted RBP12.8□□□□□ -0.36
TCD2YKL027W AVT1P47082 602 aa12.8□□□□□ -0.36
TCD2YKL027W ACF4P47129 309 aa12.8□□□□□ -0.36
TCD2YKL027W JJJ3P47138 172 aa12.8□□□□□ -0.36
TCD2YKL027W LSC2P53312 427 aa12.8□□□□□ -0.36
TCD2YKL027W RTT102P53330 157 aa12.8□□□□□ -0.36
TCD2YKL027W CUS1Q02554 436 aaPredicted RBP12.8□□□□□ -0.36
TCD2YKL027W IES4Q08561 116 aa12.8□□□□□ -0.36
TCD2YKL027W OSW2Q12202 724 aa12.8□□□□□ -0.36
TCD2YKL027W DAL7P21826 554 aa12.79□□□□□ -0.36
TCD2YKL027W PSO2P30620 661 aa12.79□□□□□ -0.36
TCD2YKL027W PAM1P37304 830 aaKnown RBP12.79□□□□□ -0.36
TCD2YKL027W CCM1P48237 864 aaPredicted RBP12.79□□□□□ -0.36
TCD2YKL027W FMP30Q02883 468 aa12.79□□□□□ -0.36
TCD2YKL027W YPL216WQ08964 1102 aa12.79□□□□□ -0.36
TCD2YKL027W CDC37P06101 506 aaKnown RBP12.78□□□□□ -0.36
TCD2YKL027W NAM7P30771 971 aaKnown RBP12.78□□□□□ -0.36
TCD2YKL027W DPH2P32461 534 aa12.78□□□□□ -0.36
TCD2YKL027W KTR2P33550 425 aa12.78□□□□□ -0.36
TCD2YKL027W MNN4P36044 1178 aa12.78□□□□□ -0.36
TCD2YKL027W ERC1P38767 581 aa12.78□□□□□ -0.36
TCD2YKL027W ALD5P40047 520 aaKnown RBP12.78□□□□□ -0.36
TCD2YKL027W TOS3P43637 560 aa12.78□□□□□ -0.36
TCD2YKL027W AIP1P46680 615 aaKnown RBP12.78□□□□□ -0.36
TCD2YKL027W VPS72Q03388 795 aa12.78□□□□□ -0.36
TCD2YKL027W EBS1Q03466 884 aaKnown RBP12.78□□□□□ -0.36
TCD2YKL027W COG4Q06096 861 aa12.78□□□□□ -0.36
TCD2YKL027W MRC1P25588 1096 aa12.77□□□□□ -0.37
TCD2YKL027W AZR1P50080 613 aa12.77□□□□□ -0.37
TCD2YKL027W TAM41P53230 385 aa12.77□□□□□ -0.37
TCD2YKL027W SSL2Q00578 843 aa12.77□□□□□ -0.37
TCD2YKL027W RIF1P29539 1916 aa12.77□□□□□ -0.37
TCD2YKL027W SSD1P24276 1250 aaKnown RBP RIP-Chip data12.76□□□□□ -0.37not detected
TCD2YKL027W TRK2P28584 889 aa12.76□□□□□ -0.37
TCD2YKL027W YEL1P34225 687 aa12.76□□□□□ -0.37
TCD2YKL027W SHE10P53075 577 aa12.76□□□□□ -0.37
TCD2YKL027W YNL146WP53906 100 aa12.76□□□□□ -0.37
TCD2YKL027W YPL034WQ03083 165 aa12.76□□□□□ -0.37
TCD2YKL027W WAR1Q03631 944 aa12.76□□□□□ -0.37
TCD2YKL027W PIB1Q06651 286 aa12.76□□□□□ -0.37
TCD2YKL027W YOL075CQ08234 1294 aa12.76□□□□□ -0.37
TCD2YKL027W WHI2P12611 486 aa12.75□□□□□ -0.37
TCD2YKL027W PSY4P38193 441 aa12.75□□□□□ -0.37
TCD2YKL027W YFL040WP43562 540 aa12.75□□□□□ -0.37
TCD2YKL027W CUL3P53202 744 aa12.75□□□□□ -0.37
TCD2YKL027W VTC3Q02725 835 aa12.75□□□□□ -0.37
TCD2YKL027W YAP7Q08182 245 aa12.75□□□□□ -0.37
TCD2YKL027W TFC8Q12308 588 aa12.75□□□□□ -0.37
TCD2YKL027W TMT1P32643 299 aa12.74□□□□□ -0.37
TCD2YKL027W TMA16Q08687 178 aa12.74□□□□□ -0.37
TCD2YKL027W CDC53Q12018 815 aaKnown RBP12.74□□□□□ -0.37
TCD2YKL027W YDR524C-BQ3E6R4 66 aa12.74□□□□□ -0.37
TCD2YKL027W SAP190P36123 1033 aa12.73□□□□□ -0.37
TCD2YKL027W ECM7Q06200 448 aa12.73□□□□□ -0.37
TCD2YKL027W RLP24Q07915 199 aaKnown RBP12.73□□□□□ -0.37
TCD2YKL027W LDB19Q12502 818 aa12.73□□□□□ -0.37
TCD2YKL027W BUD2P33314 1104 aa12.72□□□□□ -0.37
TCD2YKL027W YET1P35723 206 aa12.72□□□□□ -0.37
TCD2YKL027W MIC60P36112 540 aa12.72□□□□□ -0.37
TCD2YKL027W UBP5P39944 805 aa12.72□□□□□ -0.37
TCD2YKL027W SAD1P43589 448 aa12.72□□□□□ -0.37
TCD2YKL027W DON1Q05610 365 aa12.72□□□□□ -0.37
TCD2YKL027W SKG6P32900 734 aaPredicted RBP12.71□□□□□ -0.37
TCD2YKL027W LCB2P40970 561 aa12.71□□□□□ -0.37
TCD2YKL027W SGM1P47166 707 aa12.71□□□□□ -0.37
TCD2YKL027W MNP1P53163 194 aaPredicted RBP12.71□□□□□ -0.37
TCD2YKL027W YDR090CQ03193 310 aa12.71□□□□□ -0.37
TCD2YKL027W VMA1P17255 1071 aaKnown RBP12.7□□□□□ -0.38
TCD2YKL027W WHI3P34761 661 aaKnown RBP12.7□□□□□ -0.38
TCD2YKL027W MPE1P35728 441 aaKnown RBP12.7□□□□□ -0.38
TCD2YKL027W CTM1P38818 585 aa12.7□□□□□ -0.38
TCD2YKL027W FIR1P40020 876 aa12.7□□□□□ -0.38
TCD2YKL027W MGA2P40578 1113 aa12.7□□□□□ -0.38
TCD2YKL027W ENV11P53246 860 aa12.7□□□□□ -0.38
TCD2YKL027W GIR2Q03768 265 aaPredicted RBP12.7□□□□□ -0.38
TCD2YKL027W MLH2Q07980 695 aa12.7□□□□□ -0.38
TCD2YKL027W SCP160P06105 1222 aaKnown RBP RIP-Chip data12.69□□□□□ -0.38not detected
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms