RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W STI1P15705 589 aaKnown RBP RIP-Chip data6.32□□□□□ -1.4not detected
CBF1YJR060W RSC6P25632 483 aa6.32□□□□□ -1.4
CBF1YJR060W SPL2P38839 148 aa6.32□□□□□ -1.4
CBF1YJR060W FAR11P53917 953 aa6.32□□□□□ -1.4
CBF1YJR060W CRF1Q04930 467 aa6.32□□□□□ -1.4
CBF1YJR060W RGA2Q06407 1009 aa6.32□□□□□ -1.4
CBF1YJR060W CDC53Q12018 815 aaKnown RBP6.32□□□□□ -1.4
CBF1YJR060W MCD1Q12158 566 aa6.32□□□□□ -1.4
CBF1YJR060W RRG1Q12167 365 aaPredicted RBP6.32□□□□□ -1.4
CBF1YJR060W TY1A-NL1Q12391 440 aaKnown RBP6.32□□□□□ -1.4
CBF1YJR060W YOR131CQ12486 218 aa6.32□□□□□ -1.4
CBF1YJR060W THS1P04801 734 aaKnown RBP6.31□□□□□ -1.4
CBF1YJR060W UGA4P32837 571 aa6.31□□□□□ -1.4
CBF1YJR060W YKL077WP36081 392 aa6.31□□□□□ -1.4
CBF1YJR060W SHU2P38957 223 aa6.31□□□□□ -1.4
CBF1YJR060W FUN12P39730 1002 aaKnown RBP6.31□□□□□ -1.4
CBF1YJR060W ULP1Q02724 621 aa6.31□□□□□ -1.4
CBF1YJR060W ECM16Q04217 1267 aaKnown RBP6.31□□□□□ -1.4
CBF1YJR060W MCA1Q08601 432 aa6.31□□□□□ -1.4
CBF1YJR060W YIG1Q08956 461 aa6.31□□□□□ -1.4
CBF1YJR060W CIT2P08679 460 aa6.3□□□□□ -1.4
CBF1YJR060W ERS1P17261 260 aa6.3□□□□□ -1.4
CBF1YJR060W PRE9P23638 258 aaKnown RBP6.3□□□□□ -1.4
CBF1YJR060W RRP14P36080 434 aaKnown RBP6.3□□□□□ -1.4
CBF1YJR060W LSB3P43603 459 aaKnown RBP6.3□□□□□ -1.4
CBF1YJR060W RSM26P47141 266 aa6.3□□□□□ -1.4
CBF1YJR060W GDE1Q02979 1223 aa6.3□□□□□ -1.4
CBF1YJR060W IRC4Q03036 179 aa6.3□□□□□ -1.4
CBF1YJR060W ACK1Q07622 623 aaPredicted RBP6.3□□□□□ -1.4
CBF1YJR060W RRI2Q12348 645 aa6.3□□□□□ -1.4
CBF1YJR060W PDR18P53756 1333 aa6.29□□□□□ -1.4
CBF1YJR060W SQT1P35184 431 aa6.29□□□□□ -1.4
CBF1YJR060W CCT8P47079 568 aaKnown RBP6.29□□□□□ -1.4
CBF1YJR060W MLC1P53141 149 aa6.29□□□□□ -1.4
CBF1YJR060W PRP42Q03776 544 aaKnown RBP6.29□□□□□ -1.4
CBF1YJR060W YLL054CQ12244 843 aa6.29□□□□□ -1.4
CBF1YJR060W FLO1P32768 1537 aa6.29□□□□□ -1.4
CBF1YJR060W SEC18P18759 758 aaKnown RBP6.28□□□□□ -1.4
CBF1YJR060W GCV1P48015 400 aa6.28□□□□□ -1.4
CBF1YJR060W ARI1P53111 347 aaKnown RBP6.28□□□□□ -1.4
CBF1YJR060W PEX13P80667 386 aa6.28□□□□□ -1.4
CBF1YJR060W TRM44Q02648 567 aaKnown RBP6.28□□□□□ -1.4
CBF1YJR060W RPN4Q03465 531 aa6.28□□□□□ -1.4
CBF1YJR060W FLO11P08640 1367 aa6.28□□□□□ -1.4
CBF1YJR060W LCB1P25045 558 aaKnown RBP6.27□□□□□ -1.41
CBF1YJR060W AFG2P32794 780 aa6.27□□□□□ -1.41
CBF1YJR060W ALG12P53730 551 aa6.27□□□□□ -1.41
CBF1YJR060W NOG1Q02892 647 aaKnown RBP6.27□□□□□ -1.41
CBF1YJR060W YPL034WQ03083 165 aa6.27□□□□□ -1.41
CBF1YJR060W NOT3P06102 836 aaKnown RBP6.26□□□□□ -1.41
CBF1YJR060W CDC16P09798 840 aa6.26□□□□□ -1.41
CBF1YJR060W CDC34P14682 295 aa6.26□□□□□ -1.41
CBF1YJR060W MSH3P25336 1018 aa6.26□□□□□ -1.41
CBF1YJR060W ECM21P38167 1117 aaKnown RBP6.26□□□□□ -1.41
CBF1YJR060W OSH3P38713 996 aaKnown RBP6.26□□□□□ -1.41
CBF1YJR060W GSM1P42950 618 aa6.26□□□□□ -1.41
CBF1YJR060W YFH7P43591 353 aa6.26□□□□□ -1.41
CBF1YJR060W FAA4P47912 694 aaKnown RBP6.26□□□□□ -1.41
CBF1YJR060W ENP2P48234 707 aaKnown RBP6.26□□□□□ -1.41
CBF1YJR060W YGL242CP53066 181 aa6.26□□□□□ -1.41
CBF1YJR060W NCE103P53615 221 aa6.26□□□□□ -1.41
CBF1YJR060W YNL193WP53870 558 aa6.26□□□□□ -1.41
CBF1YJR060W YPL109CQ02981 657 aa6.26□□□□□ -1.41
CBF1YJR060W ADI1Q03677 179 aa6.26□□□□□ -1.41
CBF1YJR060W CYB2P00175 591 aa6.25□□□□□ -1.41
CBF1YJR060W TY1A-LR4P0C2I8 440 aaKnown RBP6.25□□□□□ -1.41
CBF1YJR060W TY1A-DR6P0CX70 440 aa6.25□□□□□ -1.41
CBF1YJR060W TY1A-ER1P0CX71 440 aa6.25□□□□□ -1.41
CBF1YJR060W TY1A-LR2P0CX72 440 aa6.25□□□□□ -1.41
CBF1YJR060W TY1A-PLP0CX73 440 aa6.25□□□□□ -1.41
CBF1YJR060W TY1A-JR1P0CX74 440 aa6.25□□□□□ -1.41
CBF1YJR060W TY1A-LR3P0CX75 440 aa6.25□□□□□ -1.41
CBF1YJR060W TY1A-ML2P0CX76 440 aa6.25□□□□□ -1.41
CBF1YJR060W PRI2P20457 528 aa6.25□□□□□ -1.41
CBF1YJR060W STV1P37296 890 aa6.25□□□□□ -1.41
CBF1YJR060W PBP2P38151 413 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41not detected
CBF1YJR060W EXO5P38289 585 aa6.25□□□□□ -1.41
CBF1YJR060W REI1P38344 393 aaPredicted RBP6.25□□□□□ -1.41
CBF1YJR060W VPS4P52917 437 aa6.25□□□□□ -1.41
CBF1YJR060W YGR117CP53270 476 aa6.25□□□□□ -1.41
CBF1YJR060W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41not detected
CBF1YJR060W RPN7Q06103 429 aaKnown RBP6.25□□□□□ -1.41
CBF1YJR060W YOR223WQ12015 292 aa6.25□□□□□ -1.41
CBF1YJR060W TY1A-GR1Q12085 440 aa6.25□□□□□ -1.41
CBF1YJR060W REC8Q12188 680 aa6.25□□□□□ -1.41
CBF1YJR060W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.25□□□□□ -1.41
CBF1YJR060W TY1A-OLQ92392 440 aaKnown RBP6.25□□□□□ -1.41
CBF1YJR060W RAD50P12753 1312 aa6.25□□□□□ -1.41
CBF1YJR060W HPR1P17629 752 aaKnown RBP6.24□□□□□ -1.41
CBF1YJR060W RPS7AP26786 190 aaKnown RBP6.24□□□□□ -1.41
CBF1YJR060W PEX28P38848 579 aa6.24□□□□□ -1.41
CBF1YJR060W PEA2P40091 420 aa6.24□□□□□ -1.41
CBF1YJR060W YIR042CP40586 236 aa6.24□□□□□ -1.41
CBF1YJR060W TDA5Q06417 326 aaKnown RBP6.24□□□□□ -1.41
CBF1YJR060W BRE1Q07457 700 aaKnown RBP6.24□□□□□ -1.41
CBF1YJR060W ALG6Q12001 544 aaKnown RBP6.24□□□□□ -1.41
CBF1YJR060W COQ2P32378 372 aa6.23□□□□□ -1.41
CBF1YJR060W MDL2P33311 773 aa6.23□□□□□ -1.41
CBF1YJR060W PTK1P36002 662 aaPredicted RBP6.23□□□□□ -1.41
CBF1YJR060W ARL1P38116 183 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 47 ms