RNA–Protein interactions for RNA: YJL189W

RPL39, Transcript of Ribosomal 60S subunit protein L39, yeastyeast

Gene RPL39, Length 156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL39YJL189W RKM4Q12504 494 aa3.53□□□□□ -1.84
RPL39YJL189W EFT1P32324 842 aaKnown RBP3.52□□□□□ -1.85
RPL39YJL189W ABD1P32783 436 aaPredicted RBP3.52□□□□□ -1.85
RPL39YJL189W URN1Q06525 465 aaKnown RBP3.52□□□□□ -1.85
RPL39YJL189W TRM13Q12383 476 aa3.52□□□□□ -1.85
RPL39YJL189W HSF1P10961 833 aa3.51□□□□□ -1.85
RPL39YJL189W PET112P33893 541 aa3.51□□□□□ -1.85
RPL39YJL189W MBP1P39678 833 aa3.51□□□□□ -1.85
RPL39YJL189W STB4P50104 949 aa3.51□□□□□ -1.85
RPL39YJL189W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
RPL39YJL189W URM1P40554 99 aaPredicted RBP3.5□□□□□ -1.85
RPL39YJL189W PSP2P50109 593 aaKnown RBP3.5□□□□□ -1.85
RPL39YJL189W TMN2Q04562 672 aa3.5□□□□□ -1.85
RPL39YJL189W ENB1Q08299 606 aa3.5□□□□□ -1.85
RPL39YJL189W FUN30P31380 1131 aa3.49□□□□□ -1.85
RPL39YJL189W FAA4P47912 694 aaKnown RBP3.49□□□□□ -1.85
RPL39YJL189W MUK1Q02866 612 aa3.49□□□□□ -1.85
RPL39YJL189W UPC2Q12151 913 aa3.49□□□□□ -1.85
RPL39YJL189W ERG4P25340 473 aa3.48□□□□□ -1.85
RPL39YJL189W MET10P39692 1035 aa3.48□□□□□ -1.85
RPL39YJL189W SLU7Q02775 382 aaKnown RBP3.48□□□□□ -1.85
RPL39YJL189W LGE1Q02796 332 aaKnown RBP3.48□□□□□ -1.85
RPL39YJL189W YML020WQ03722 664 aa3.48□□□□□ -1.85
RPL39YJL189W SPO20Q04359 397 aa3.48□□□□□ -1.85
RPL39YJL189W YLL058WQ12198 575 aa3.48□□□□□ -1.85
RPL39YJL189W RMD1Q03441 430 aa3.47□□□□□ -1.85
RPL39YJL189W YPR196WQ06595 470 aa3.47□□□□□ -1.85
RPL39YJL189W RPP2AP05319 106 aaKnown RBP3.46□□□□□ -1.86
RPL39YJL189W HEM3P28789 327 aa3.46□□□□□ -1.86
RPL39YJL189W STE14P32584 239 aa3.46□□□□□ -1.86
RPL39YJL189W SSL1Q04673 461 aaPredicted RBP3.46□□□□□ -1.86
RPL39YJL189W MCH5Q08777 521 aa3.46□□□□□ -1.86
RPL39YJL189W CDC12P32468 407 aaKnown RBP3.45□□□□□ -1.86
RPL39YJL189W YGR053CP53234 283 aa3.45□□□□□ -1.86
RPL39YJL189W GDE1Q02979 1223 aa3.45□□□□□ -1.86
RPL39YJL189W DUS3Q06053 668 aaKnown RBP3.45□□□□□ -1.86
RPL39YJL189W SED4P25365 1065 aa3.44□□□□□ -1.86
RPL39YJL189W RPD3P32561 433 aa3.44□□□□□ -1.86
RPL39YJL189W PIN4P34217 668 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
RPL39YJL189W KTR4P38131 464 aa3.44□□□□□ -1.86
RPL39YJL189W GUP2Q08929 609 aa3.44□□□□□ -1.86
RPL39YJL189W TRP4P07285 380 aaPredicted RBP3.43□□□□□ -1.86
RPL39YJL189W ALG7P07286 448 aa3.43□□□□□ -1.86
RPL39YJL189W NPP1P25353 742 aa3.43□□□□□ -1.86
RPL39YJL189W ATG19P35193 415 aa3.43□□□□□ -1.86
RPL39YJL189W MTH1P35198 433 aa3.43□□□□□ -1.86
RPL39YJL189W TSL1P38427 1098 aaKnown RBP3.43□□□□□ -1.86
RPL39YJL189W YER158CP40095 573 aa3.43□□□□□ -1.86
RPL39YJL189W ATF1P40353 525 aa3.43□□□□□ -1.86
RPL39YJL189W QRI1P43123 477 aaKnown RBP3.43□□□□□ -1.86
RPL39YJL189W RAI1P53063 387 aaKnown RBP3.43□□□□□ -1.86
RPL39YJL189W GND2P53319 492 aa3.43□□□□□ -1.86
RPL39YJL189W ERG5P54781 538 aa3.43□□□□□ -1.86
RPL39YJL189W SRP1Q02821 542 aaKnown RBP3.43□□□□□ -1.86
RPL39YJL189W NOT3P06102 836 aaKnown RBP3.42□□□□□ -1.86
RPL39YJL189W ERT1P38140 529 aa3.42□□□□□ -1.86
RPL39YJL189W STU2P46675 888 aa3.42□□□□□ -1.86
RPL39YJL189W GYP7P48365 746 aa3.42□□□□□ -1.86
RPL39YJL189W RNT1Q02555 471 aa3.42□□□□□ -1.86
RPL39YJL189W IRC10Q08118 586 aa3.42□□□□□ -1.86
RPL39YJL189W ACF2Q12168 779 aa3.42□□□□□ -1.86
RPL39YJL189W PRI2P20457 528 aa3.41□□□□□ -1.86
RPL39YJL189W SEC21P32074 935 aaKnown RBP3.41□□□□□ -1.86
RPL39YJL189W MNR2P35724 969 aa3.41□□□□□ -1.86
RPL39YJL189W SPC42P36094 363 aa3.41□□□□□ -1.86
RPL39YJL189W VBA5P36172 582 aa3.41□□□□□ -1.86
RPL39YJL189W YDR306CQ06640 478 aa3.41□□□□□ -1.86
RPL39YJL189W OMS1Q06668 471 aa3.41□□□□□ -1.86
RPL39YJL189W FAL1Q12099 399 aaKnown RBP3.41□□□□□ -1.86
RPL39YJL189W PPR1P07272 904 aaPredicted RBP3.4□□□□□ -1.87
RPL39YJL189W PEX2P32800 271 aa3.4□□□□□ -1.87
RPL39YJL189W AFR1P33304 620 aa3.4□□□□□ -1.87
RPL39YJL189W YKL069WP36088 180 aa3.4□□□□□ -1.87
RPL39YJL189W PPS1P38148 807 aa3.4□□□□□ -1.87
RPL39YJL189W PEX19Q07418 342 aa3.4□□□□□ -1.87
RPL39YJL189W BDF2Q07442 638 aa3.4□□□□□ -1.87
RPL39YJL189W NOP8Q08287 484 aaPredicted RBP3.4□□□□□ -1.87
RPL39YJL189W GUS1P46655 708 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
RPL39YJL189W CDC48P25694 835 aaKnown RBP3.38□□□□□ -1.87
RPL39YJL189W SBA1P28707 216 aaKnown RBP3.38□□□□□ -1.87
RPL39YJL189W PPH3P32345 308 aa3.38□□□□□ -1.87
RPL39YJL189W STE13P33894 931 aa3.38□□□□□ -1.87
RPL39YJL189W YIL108WP40483 696 aaKnown RBP3.38□□□□□ -1.87
RPL39YJL189W CWC24P53769 259 aa3.38□□□□□ -1.87
RPL39YJL189W AGP1P25376 633 aa3.37□□□□□ -1.87
RPL39YJL189W RPC82P32349 654 aa3.37□□□□□ -1.87
RPL39YJL189W CUE2P36075 443 aaKnown RBP3.37□□□□□ -1.87
RPL39YJL189W SNF7P39929 240 aaKnown RBP3.37□□□□□ -1.87
RPL39YJL189W YKE2P52553 114 aa3.37□□□□□ -1.87
RPL39YJL189W MRPS35P53292 345 aa3.37□□□□□ -1.87
RPL39YJL189W FRE5Q08908 694 aa3.37□□□□□ -1.87
RPL39YJL189W SUT2Q12286 268 aa3.37□□□□□ -1.87
RPL39YJL189W TUB3P09734 445 aaKnown RBP3.36□□□□□ -1.87
RPL39YJL189W ASF1P32447 279 aa3.36□□□□□ -1.87
RPL39YJL189W YRO2P38079 344 aa3.36□□□□□ -1.87
RPL39YJL189W FKH2P41813 862 aa3.36□□□□□ -1.87
RPL39YJL189W TIM44Q01852 431 aa3.36□□□□□ -1.87
RPL39YJL189W OPI10Q08202 246 aa3.36□□□□□ -1.87
RPL39YJL189W MRH1Q12117 320 aaPredicted RBP3.36□□□□□ -1.87
RPL39YJL189W FBP1P09201 348 aa3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 106.2 ms