RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W MDM10P18409 493 aa4.16□□□□□ -1.74
PEP8YJL053W PPZ2P33329 710 aa4.16□□□□□ -1.74
PEP8YJL053W RPS26AP39938 119 aaKnown RBP4.16□□□□□ -1.74
PEP8YJL053W RPS26BP39939 119 aaKnown RBP4.16□□□□□ -1.74
PEP8YJL053W SDS3P40505 327 aa4.15□□□□□ -1.75
PEP8YJL053W ICT1Q12385 394 aa4.15□□□□□ -1.75
PEP8YJL053W CYC8P14922 966 aa4.14□□□□□ -1.75
PEP8YJL053W SED4P25365 1065 aa4.14□□□□□ -1.75
PEP8YJL053W MDM38Q08179 573 aa4.14□□□□□ -1.75
PEP8YJL053W MRH1Q12117 320 aaPredicted RBP4.14□□□□□ -1.75
PEP8YJL053W FUN30P31380 1131 aa4.13□□□□□ -1.75
PEP8YJL053W SRT1Q03175 343 aa4.13□□□□□ -1.75
PEP8YJL053W YLL058WQ12198 575 aa4.13□□□□□ -1.75
PEP8YJL053W GFA1P14742 717 aaKnown RBP4.12□□□□□ -1.75
PEP8YJL053W COQ11Q05892 277 aa4.12□□□□□ -1.75
PEP8YJL053W SLD2P34252 453 aa4.11□□□□□ -1.75
PEP8YJL053W SSF1P38789 453 aaPredicted RBP4.11□□□□□ -1.75
PEP8YJL053W DAS1P47005 663 aa4.11□□□□□ -1.75
PEP8YJL053W IMO32P53219 342 aa4.11□□□□□ -1.75
PEP8YJL053W YML020WQ03722 664 aa4.11□□□□□ -1.75
PEP8YJL053W TMA46Q12000 345 aaKnown RBP4.11□□□□□ -1.75
PEP8YJL053W UPC2Q12151 913 aa4.11□□□□□ -1.75
PEP8YJL053W YNL162W-AQ3E7A8 72 aa4.11□□□□□ -1.75
PEP8YJL053W SEC20P28791 383 aa4.1□□□□□ -1.75
PEP8YJL053W YHL017WP38745 532 aa4.1□□□□□ -1.75
PEP8YJL053W SEC5P89102 971 aa4.1□□□□□ -1.75
PEP8YJL053W RTT10Q08924 1013 aa4.1□□□□□ -1.75
PEP8YJL053W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.1□□□□□ -1.75not detected
PEP8YJL053W BNR1P40450 1375 aa4.1□□□□□ -1.75
PEP8YJL053W TUB1P09733 447 aaKnown RBP4.09□□□□□ -1.75
PEP8YJL053W HCA4P20448 770 aaKnown RBP4.09□□□□□ -1.75
PEP8YJL053W PPS1P38148 807 aa4.09□□□□□ -1.75
PEP8YJL053W TDP1P38319 544 aa4.09□□□□□ -1.75
PEP8YJL053W HRQ1Q05549 1077 aa4.09□□□□□ -1.75
PEP8YJL053W TRM13Q12383 476 aa4.09□□□□□ -1.75
PEP8YJL053W RIX1P38883 763 aaPredicted RBP4.08□□□□□ -1.76
PEP8YJL053W SAH1P39954 449 aaKnown RBP4.08□□□□□ -1.76
PEP8YJL053W YPR196WQ06595 470 aa4.08□□□□□ -1.76
PEP8YJL053W FRE5Q08908 694 aa4.08□□□□□ -1.76
PEP8YJL053W MET3P08536 511 aa4.07□□□□□ -1.76
PEP8YJL053W CDC43P18898 376 aa4.07□□□□□ -1.76
PEP8YJL053W TMT1P32643 299 aa4.07□□□□□ -1.76
PEP8YJL053W GIC1P38785 314 aa4.07□□□□□ -1.76
PEP8YJL053W NOP8Q08287 484 aaPredicted RBP4.07□□□□□ -1.76
PEP8YJL053W ILV6P25605 309 aaKnown RBP4.06□□□□□ -1.76
PEP8YJL053W LYP1P32487 611 aa4.06□□□□□ -1.76
PEP8YJL053W YKL107WP34251 309 aa4.06□□□□□ -1.76
PEP8YJL053W MOT2P34909 587 aaKnown RBP4.06□□□□□ -1.76
PEP8YJL053W YKL151CP36059 337 aa4.06□□□□□ -1.76
PEP8YJL053W GLO1P50107 326 aa4.06□□□□□ -1.76
PEP8YJL053W PEX19Q07418 342 aa4.06□□□□□ -1.76
PEP8YJL053W SUT2Q12286 268 aa4.06□□□□□ -1.76
PEP8YJL053W RKM4Q12504 494 aa4.06□□□□□ -1.76
PEP8YJL053W INO1P11986 533 aa4.05□□□□□ -1.76
PEP8YJL053W RPC82P32349 654 aa4.05□□□□□ -1.76
PEP8YJL053W YGL176CP46945 554 aa4.05□□□□□ -1.76
PEP8YJL053W DLT1Q04216 342 aa4.05□□□□□ -1.76
PEP8YJL053W TRP2P00899 507 aaKnown RBP4.04□□□□□ -1.76
PEP8YJL053W MGE1P38523 228 aa4.04□□□□□ -1.76
PEP8YJL053W SNF7P39929 240 aaKnown RBP4.04□□□□□ -1.76
PEP8YJL053W SFB2P53953 876 aa4.04□□□□□ -1.76
PEP8YJL053W SEN54Q02825 467 aaPredicted RBP4.04□□□□□ -1.76
PEP8YJL053W STE14P32584 239 aa4.03□□□□□ -1.76
PEP8YJL053W IPL1P38991 367 aa4.03□□□□□ -1.76
PEP8YJL053W RAI1P53063 387 aaKnown RBP4.03□□□□□ -1.76
PEP8YJL053W TYW3P53177 273 aa4.03□□□□□ -1.76
PEP8YJL053W YPL066WQ12194 479 aa4.03□□□□□ -1.76
PEP8YJL053W MCM2P29469 868 aa4.02□□□□□ -1.77
PEP8YJL053W ELO3P40319 345 aa4.02□□□□□ -1.77
PEP8YJL053W TAH11P47112 604 aa4.02□□□□□ -1.77
PEP8YJL053W VPS73P53142 486 aaKnown RBP4.02□□□□□ -1.77
PEP8YJL053W SRP1Q02821 542 aaKnown RBP4.02□□□□□ -1.77
PEP8YJL053W THI7Q05998 598 aa4.02□□□□□ -1.77
PEP8YJL053W ERG5P54781 538 aa4.01□□□□□ -1.77
PEP8YJL053W SLU7Q02775 382 aaKnown RBP4.01□□□□□ -1.77
PEP8YJL053W NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
PEP8YJL053W CAF20P12962 161 aaKnown RBP4□□□□□ -1.77
PEP8YJL053W KIN3P22209 435 aa4□□□□□ -1.77
PEP8YJL053W ASF1P32447 279 aa4□□□□□ -1.77
PEP8YJL053W YIL166CP40445 542 aa4□□□□□ -1.77
PEP8YJL053W SPR28Q04921 423 aa4□□□□□ -1.77
PEP8YJL053W CRR1Q05790 422 aa4□□□□□ -1.77
PEP8YJL053W ADY4Q05955 493 aa4□□□□□ -1.77
PEP8YJL053W ESF1Q06344 628 aaKnown RBP4□□□□□ -1.77
PEP8YJL053W MET6P05694 767 aaKnown RBP3.99□□□□□ -1.77
PEP8YJL053W PCL5P38794 229 aa3.99□□□□□ -1.77
PEP8YJL053W NPP2P39997 493 aa3.99□□□□□ -1.77
PEP8YJL053W SWM1Q12379 170 aa3.99□□□□□ -1.77
PEP8YJL053W HEM3P28789 327 aa3.98□□□□□ -1.77
PEP8YJL053W CTF13P35203 478 aa3.98□□□□□ -1.77
PEP8YJL053W FLO10P36170 1169 aa3.98□□□□□ -1.77
PEP8YJL053W VPS30Q02948 557 aa3.98□□□□□ -1.77
PEP8YJL053W SPO20Q04359 397 aa3.98□□□□□ -1.77
PEP8YJL053W ARO10Q06408 635 aa3.98□□□□□ -1.77
PEP8YJL053W TRM11Q12463 433 aa3.98□□□□□ -1.77
PEP8YJL053W SEC21P32074 935 aaKnown RBP3.97□□□□□ -1.77
PEP8YJL053W YLR225CQ05948 407 aaKnown RBP3.97□□□□□ -1.77
PEP8YJL053W PIN4P34217 668 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
PEP8YJL053W NOT3P06102 836 aaKnown RBP3.95□□□□□ -1.78
PEP8YJL053W ADY2P25613 283 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms