RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C HSP82P02829 709 aaKnown RBP2.32□□□□□ -2.04
RTT101YJL047C RPS21AP0C0V8 87 aaKnown RBP2.32□□□□□ -2.04
RTT101YJL047C TRK1P12685 1235 aa2.32□□□□□ -2.04
RTT101YJL047C MET8P15807 274 aa2.32□□□□□ -2.04
RTT101YJL047C RPC31P17890 251 aa2.32□□□□□ -2.04
RTT101YJL047C AAD3P25612 363 aa2.32□□□□□ -2.04
RTT101YJL047C PIN4P34217 668 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
RTT101YJL047C SHM1P37292 490 aaPredicted RBP2.32□□□□□ -2.04
RTT101YJL047C GIP1P38229 639 aa2.32□□□□□ -2.04
RTT101YJL047C UBS1P38290 277 aa2.32□□□□□ -2.04
RTT101YJL047C GPD2P41911 440 aaKnown RBP2.32□□□□□ -2.04
RTT101YJL047C GZF3P42944 551 aaKnown RBP2.32□□□□□ -2.04
RTT101YJL047C ROG3P43602 733 aa2.32□□□□□ -2.04
RTT101YJL047C TAD1P53065 400 aa2.32□□□□□ -2.04
RTT101YJL047C TAN1P53072 289 aaPredicted RBP2.32□□□□□ -2.04
RTT101YJL047C PAP2P53632 584 aaKnown RBP2.32□□□□□ -2.04
RTT101YJL047C YNR063WP53749 607 aa2.32□□□□□ -2.04
RTT101YJL047C YNL058CP53947 316 aa2.32□□□□□ -2.04
RTT101YJL047C ECM9Q02202 377 aa2.32□□□□□ -2.04
RTT101YJL047C NOG1Q02892 647 aaKnown RBP2.32□□□□□ -2.04
RTT101YJL047C FRK1Q03002 865 aaPredicted RBP2.32□□□□□ -2.04
RTT101YJL047C YKU80Q04437 629 aa2.32□□□□□ -2.04
RTT101YJL047C PMT7Q06644 662 aa2.32□□□□□ -2.04
RTT101YJL047C BRE4Q07660 1125 aa2.32□□□□□ -2.04
RTT101YJL047C YOR296WQ08748 1289 aa2.32□□□□□ -2.04
RTT101YJL047C PUS1Q12211 544 aaKnown RBP2.32□□□□□ -2.04
RTT101YJL047C YOL114CQ12322 202 aa2.32□□□□□ -2.04
RTT101YJL047C SPO21Q12411 609 aa2.32□□□□□ -2.04
RTT101YJL047C SPT7P35177 1332 aa2.31□□□□□ -2.04
RTT101YJL047C HVG1P0CE11 249 aa2.31□□□□□ -2.04
RTT101YJL047C PHO81P17442 1178 aa2.31□□□□□ -2.04
RTT101YJL047C KRR1P25586 316 aaPredicted RBP2.31□□□□□ -2.04
RTT101YJL047C DOM34P33309 386 aa2.31□□□□□ -2.04
RTT101YJL047C YKL050CP35736 922 aa2.31□□□□□ -2.04
RTT101YJL047C MCM7P38132 845 aa2.31□□□□□ -2.04
RTT101YJL047C ECM2P38241 364 aaKnown RBP2.31□□□□□ -2.04
RTT101YJL047C GYP8P43570 497 aa2.31□□□□□ -2.04
RTT101YJL047C GUS1P46655 708 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
RTT101YJL047C MNN11P46985 422 aaKnown RBP2.31□□□□□ -2.04
RTT101YJL047C PCL10P53124 433 aa2.31□□□□□ -2.04
RTT101YJL047C PRP43P53131 767 aaKnown RBP2.31□□□□□ -2.04
RTT101YJL047C PRP3Q03338 469 aaPredicted RBP2.31□□□□□ -2.04
RTT101YJL047C RCF1Q03713 159 aa2.31□□□□□ -2.04
RTT101YJL047C YMR018WQ04364 514 aa2.31□□□□□ -2.04
RTT101YJL047C PUS5Q06244 254 aa2.31□□□□□ -2.04
RTT101YJL047C ATG33Q06485 197 aa2.31□□□□□ -2.04
RTT101YJL047C YDR306CQ06640 478 aa2.31□□□□□ -2.04
RTT101YJL047C HIM1Q06674 414 aa2.31□□□□□ -2.04
RTT101YJL047C PSH1Q12161 406 aa2.31□□□□□ -2.04
RTT101YJL047C INO80P53115 1489 aa2.31□□□□□ -2.04
RTT101YJL047C RGP1P16664 663 aa2.31□□□□□ -2.04
RTT101YJL047C COX11P19516 300 aaKnown RBP2.31□□□□□ -2.04
RTT101YJL047C DBP5P20449 482 aaKnown RBP2.31□□□□□ -2.04
RTT101YJL047C GBP2P25555 427 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
RTT101YJL047C SYP1P25623 870 aaKnown RBP2.31□□□□□ -2.04
RTT101YJL047C RAD16P31244 790 aa2.31□□□□□ -2.04
RTT101YJL047C PET309P32522 965 aaPredicted RBP2.31□□□□□ -2.04
RTT101YJL047C KAP122P32767 1081 aa2.31□□□□□ -2.04
RTT101YJL047C AFR1P33304 620 aa2.31□□□□□ -2.04
RTT101YJL047C PSY4P38193 441 aa2.31□□□□□ -2.04
RTT101YJL047C MAM1P40065 302 aa2.31□□□□□ -2.04
RTT101YJL047C DPH1P40487 425 aaKnown RBP2.31□□□□□ -2.04
RTT101YJL047C CLA4P48562 842 aa2.31□□□□□ -2.04
RTT101YJL047C BTN2P53286 410 aa2.31□□□□□ -2.04
RTT101YJL047C ARC35P53731 342 aaKnown RBP2.31□□□□□ -2.04
RTT101YJL047C TDA9Q04545 1251 aa2.31□□□□□ -2.04
RTT101YJL047C RRP9Q06506 573 aaKnown RBP2.31□□□□□ -2.04
RTT101YJL047C RSC58Q07979 502 aa2.31□□□□□ -2.04
RTT101YJL047C TY1A-LR4P0C2I8 440 aaKnown RBP2.3□□□□□ -2.04
RTT101YJL047C TY1A-DR6P0CX70 440 aa2.3□□□□□ -2.04
RTT101YJL047C TY1A-ER1P0CX71 440 aa2.3□□□□□ -2.04
RTT101YJL047C TY1A-LR2P0CX72 440 aa2.3□□□□□ -2.04
RTT101YJL047C TY1A-PLP0CX73 440 aa2.3□□□□□ -2.04
RTT101YJL047C TY1A-JR1P0CX74 440 aa2.3□□□□□ -2.04
RTT101YJL047C TY1A-LR3P0CX75 440 aa2.3□□□□□ -2.04
RTT101YJL047C TY1A-ML2P0CX76 440 aa2.3□□□□□ -2.04
RTT101YJL047C DAL7P21826 554 aa2.3□□□□□ -2.04
RTT101YJL047C MIH1P23748 554 aa2.3□□□□□ -2.04
RTT101YJL047C PAH1P32567 862 aa2.3□□□□□ -2.04
RTT101YJL047C SMY2P32909 740 aaKnown RBP2.3□□□□□ -2.04
RTT101YJL047C YEL1P34225 687 aa2.3□□□□□ -2.04
RTT101YJL047C EBP2P36049 427 aaKnown RBP2.3□□□□□ -2.04
RTT101YJL047C EXO5P38289 585 aa2.3□□□□□ -2.04
RTT101YJL047C HXT6P39003 570 aaKnown RBP2.3□□□□□ -2.04
RTT101YJL047C HXT7P39004 570 aa2.3□□□□□ -2.04
RTT101YJL047C TPA1P40032 644 aaKnown RBP2.3□□□□□ -2.04
RTT101YJL047C BFA1P47113 574 aa2.3□□□□□ -2.04
RTT101YJL047C ENT3P47160 408 aa2.3□□□□□ -2.04
RTT101YJL047C YGR153WP48238 217 aa2.3□□□□□ -2.04
RTT101YJL047C YGR250CP53316 781 aaKnown RBP2.3□□□□□ -2.04
RTT101YJL047C SAS4Q04003 481 aa2.3□□□□□ -2.04
RTT101YJL047C TAF11Q04226 346 aa2.3□□□□□ -2.04
RTT101YJL047C SGD1Q06132 899 aa2.3□□□□□ -2.04
RTT101YJL047C CDC45Q08032 650 aa2.3□□□□□ -2.04
RTT101YJL047C PGC1Q08959 321 aa2.3□□□□□ -2.04
RTT101YJL047C TY1A-GR1Q12085 440 aa2.3□□□□□ -2.04
RTT101YJL047C RRG1Q12167 365 aaPredicted RBP2.3□□□□□ -2.04
RTT101YJL047C TY1A-PR3Q6Q5H1 440 aaKnown RBP2.3□□□□□ -2.04
RTT101YJL047C TY1A-OLQ92392 440 aaKnown RBP2.3□□□□□ -2.04
RTT101YJL047C HSH49Q99181 213 aaPredicted RBP2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms