RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C OSW2Q12202 724 aa10.71□□□□□ -0.69
MET28YIR017C COT1P32798 439 aa10.7□□□□□ -0.7
MET28YIR017C PGM2P37012 569 aaKnown RBP10.7□□□□□ -0.7
MET28YIR017C GUA1P38625 525 aaKnown RBP10.7□□□□□ -0.7
MET28YIR017C TFG2P41896 400 aaPredicted RBP10.7□□□□□ -0.7
MET28YIR017C YGR237CP50089 785 aa10.7□□□□□ -0.7
MET28YIR017C VID30P53076 958 aa10.7□□□□□ -0.7
MET28YIR017C ARK1P53974 638 aa10.7□□□□□ -0.7
MET28YIR017C HFI1Q12060 488 aa10.7□□□□□ -0.7
MET28YIR017C HIF1Q12373 385 aa10.7□□□□□ -0.7
MET28YIR017C CDC37P06101 506 aaKnown RBP10.69□□□□□ -0.7
MET28YIR017C SDH2P21801 266 aa10.69□□□□□ -0.7
MET28YIR017C PSO2P30620 661 aa10.69□□□□□ -0.7
MET28YIR017C ACF4P47129 309 aa10.69□□□□□ -0.7
MET28YIR017C CCM1P48237 864 aaPredicted RBP10.69□□□□□ -0.7
MET28YIR017C YDL057WQ07379 328 aa10.69□□□□□ -0.7
MET28YIR017C MED1Q12321 566 aa10.69□□□□□ -0.7
MET28YIR017C PHO8P11491 566 aa10.68□□□□□ -0.7
MET28YIR017C YSC83P32792 385 aa10.68□□□□□ -0.7
MET28YIR017C MRPL10P36520 322 aa10.68□□□□□ -0.7
MET28YIR017C HUL4P40985 892 aa10.68□□□□□ -0.7
MET28YIR017C NBP1P52919 319 aaPredicted RBP10.68□□□□□ -0.7
MET28YIR017C RTT102P53330 157 aa10.68□□□□□ -0.7
MET28YIR017C YPL216WQ08964 1102 aa10.68□□□□□ -0.7
MET28YIR017C ECM29P38737 1868 aa10.68□□□□□ -0.7
MET28YIR017C MAK16P10962 306 aaPredicted RBP10.67□□□□□ -0.7
MET28YIR017C DAL7P21826 554 aa10.67□□□□□ -0.7
MET28YIR017C DUR3P33413 735 aa10.67□□□□□ -0.7
MET28YIR017C KTR2P33550 425 aa10.67□□□□□ -0.7
MET28YIR017C BIM1P40013 344 aa10.67□□□□□ -0.7
MET28YIR017C ALD5P40047 520 aaKnown RBP10.67□□□□□ -0.7
MET28YIR017C TOS3P43637 560 aa10.67□□□□□ -0.7
MET28YIR017C AVT1P47082 602 aa10.67□□□□□ -0.7
MET28YIR017C JJJ3P47138 172 aa10.67□□□□□ -0.7
MET28YIR017C CAF130P53280 1122 aaPredicted RBP10.67□□□□□ -0.7
MET28YIR017C LSC2P53312 427 aa10.67□□□□□ -0.7
MET28YIR017C VPS72Q03388 795 aa10.67□□□□□ -0.7
MET28YIR017C TCO89Q08921 799 aa10.67□□□□□ -0.7
MET28YIR017C HEM1P09950 548 aaPredicted RBP10.66□□□□□ -0.7
MET28YIR017C SSD1P24276 1250 aaKnown RBP RIP-Chip data10.66□□□□□ -0.7not detected
MET28YIR017C MRC1P25588 1096 aa10.66□□□□□ -0.7
MET28YIR017C NAM7P30771 971 aaKnown RBP10.66□□□□□ -0.7
MET28YIR017C MSS51P32335 436 aa10.66□□□□□ -0.7
MET28YIR017C MIC60P36112 540 aa10.66□□□□□ -0.7
MET28YIR017C PAM1P37304 830 aaKnown RBP10.66□□□□□ -0.7
MET28YIR017C ERC1P38767 581 aa10.66□□□□□ -0.7
MET28YIR017C SSL2Q00578 843 aa10.66□□□□□ -0.7
MET28YIR017C EBS1Q03466 884 aaKnown RBP10.66□□□□□ -0.7
MET28YIR017C IES4Q08561 116 aa10.66□□□□□ -0.7
MET28YIR017C SAP190P36123 1033 aa10.65□□□□□ -0.7
MET28YIR017C MGA2P40578 1113 aa10.65□□□□□ -0.7
MET28YIR017C AZR1P50080 613 aa10.65□□□□□ -0.7
MET28YIR017C WAR1Q03631 944 aa10.65□□□□□ -0.7
MET28YIR017C COG4Q06096 861 aa10.65□□□□□ -0.7
MET28YIR017C WHI2P12611 486 aa10.64□□□□□ -0.71
MET28YIR017C TRK2P28584 889 aa10.64□□□□□ -0.71
MET28YIR017C DPH2P32461 534 aa10.64□□□□□ -0.71
MET28YIR017C SPT8P38915 602 aa10.64□□□□□ -0.71
MET28YIR017C AIP1P46680 615 aaKnown RBP10.64□□□□□ -0.71
MET28YIR017C SHE10P53075 577 aa10.64□□□□□ -0.71
MET28YIR017C TAM41P53230 385 aa10.64□□□□□ -0.71
MET28YIR017C CUS1Q02554 436 aaPredicted RBP10.64□□□□□ -0.71
MET28YIR017C VTC3Q02725 835 aa10.64□□□□□ -0.71
MET28YIR017C FMP30Q02883 468 aa10.64□□□□□ -0.71
MET28YIR017C YOL075CQ08234 1294 aa10.64□□□□□ -0.71
MET28YIR017C TFC8Q12308 588 aa10.64□□□□□ -0.71
MET28YIR017C SWI6P09959 803 aa10.63□□□□□ -0.71
MET28YIR017C YEL1P34225 687 aa10.63□□□□□ -0.71
MET28YIR017C MNN4P36044 1178 aa10.63□□□□□ -0.71
MET28YIR017C PSY4P38193 441 aa10.63□□□□□ -0.71
MET28YIR017C FYV8P46949 817 aaKnown RBP10.63□□□□□ -0.71
MET28YIR017C CUL3P53202 744 aa10.63□□□□□ -0.71
MET28YIR017C TPO2P53283 614 aa10.63□□□□□ -0.71
MET28YIR017C YNL146WP53906 100 aa10.63□□□□□ -0.71
MET28YIR017C YPL034WQ03083 165 aa10.63□□□□□ -0.71
MET28YIR017C GIR2Q03768 265 aaPredicted RBP10.63□□□□□ -0.71
MET28YIR017C ECM30Q06673 1274 aa10.63□□□□□ -0.71
MET28YIR017C YAP7Q08182 245 aa10.63□□□□□ -0.71
MET28YIR017C TMA16Q08687 178 aa10.63□□□□□ -0.71
MET28YIR017C SKG6P32900 734 aaPredicted RBP10.62□□□□□ -0.71
MET28YIR017C YET1P35723 206 aa10.62□□□□□ -0.71
MET28YIR017C YFL040WP43562 540 aa10.62□□□□□ -0.71
MET28YIR017C YDR090CQ03193 310 aa10.62□□□□□ -0.71
MET28YIR017C YDR524C-BQ3E6R4 66 aa10.62□□□□□ -0.71
MET28YIR017C MSH3P25336 1018 aa10.61□□□□□ -0.71
MET28YIR017C TMT1P32643 299 aa10.61□□□□□ -0.71
MET28YIR017C BUD2P33314 1104 aa10.61□□□□□ -0.71
MET28YIR017C LEO1P38439 464 aa10.61□□□□□ -0.71
MET28YIR017C CTM1P38818 585 aa10.61□□□□□ -0.71
MET28YIR017C PIB1Q06651 286 aa10.61□□□□□ -0.71
MET28YIR017C RLP24Q07915 199 aaKnown RBP10.61□□□□□ -0.71
MET28YIR017C MLH2Q07980 695 aa10.61□□□□□ -0.71
MET28YIR017C SCP160P06105 1222 aaKnown RBP RIP-Chip data10.6□□□□□ -0.71not detected
MET28YIR017C CHS2P14180 963 aa10.6□□□□□ -0.71
MET28YIR017C MUD1P32605 298 aaKnown RBP10.6□□□□□ -0.71
MET28YIR017C VID24P38263 362 aa10.6□□□□□ -0.71
MET28YIR017C SCD6P45978 349 aaKnown RBP RIP-Chip data10.6□□□□□ -0.71not detected
MET28YIR017C SGM1P47166 707 aa10.6□□□□□ -0.71
MET28YIR017C COS5P47187 383 aa10.6□□□□□ -0.71
MET28YIR017C UTP14Q04500 899 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 7 ms