RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W HIS5P07172 385 aa6.26□□□□□ -1.41
SEC28YIL076W SPE1P08432 466 aa6.26□□□□□ -1.41
SEC28YIL076W HSF1P10961 833 aa6.26□□□□□ -1.41
SEC28YIL076W CCC2P38995 1004 aa6.26□□□□□ -1.41
SEC28YIL076W YER158CP40095 573 aa6.26□□□□□ -1.41
SEC28YIL076W IRR1P40541 1150 aa6.26□□□□□ -1.41
SEC28YIL076W GYP7P48365 746 aa6.26□□□□□ -1.41
SEC28YIL076W MNN10P50108 393 aaKnown RBP6.26□□□□□ -1.41
SEC28YIL076W SSF2Q12153 453 aaPredicted RBP6.26□□□□□ -1.41
SEC28YIL076W NPP1P25353 742 aa6.25□□□□□ -1.41
SEC28YIL076W AAR2P32357 355 aaPredicted RBP6.25□□□□□ -1.41
SEC28YIL076W YBR184WP38299 523 aa6.25□□□□□ -1.41
SEC28YIL076W PLB1P39105 664 aa6.25□□□□□ -1.41
SEC28YIL076W YPR196WQ06595 470 aa6.25□□□□□ -1.41
SEC28YIL076W TSL1P38427 1098 aaKnown RBP6.24□□□□□ -1.41
SEC28YIL076W PSP2P50109 593 aaKnown RBP6.24□□□□□ -1.41
SEC28YIL076W WRS1Q12109 432 aaKnown RBP6.24□□□□□ -1.41
SEC28YIL076W RPP2AP05319 106 aaKnown RBP6.23□□□□□ -1.41
SEC28YIL076W HCM1P25364 564 aa6.23□□□□□ -1.41
SEC28YIL076W AFR1P33304 620 aa6.23□□□□□ -1.41
SEC28YIL076W PFD1P46988 109 aa6.23□□□□□ -1.41
SEC28YIL076W TUB2P02557 457 aaKnown RBP6.22□□□□□ -1.41
SEC28YIL076W GRX1P25373 110 aaKnown RBP6.22□□□□□ -1.41
SEC28YIL076W RPC82P32349 654 aa6.22□□□□□ -1.41
SEC28YIL076W YKR078WP36158 585 aaKnown RBP6.22□□□□□ -1.41
SEC28YIL076W YRO2P38079 344 aa6.22□□□□□ -1.41
SEC28YIL076W CHA4P43634 648 aa6.22□□□□□ -1.41
SEC28YIL076W TPO2P53283 614 aa6.22□□□□□ -1.41
SEC28YIL076W PRP9P19736 530 aaKnown RBP6.21□□□□□ -1.42
SEC28YIL076W HBS1P32769 611 aaKnown RBP6.21□□□□□ -1.42
SEC28YIL076W NOP7P53261 605 aaKnown RBP6.21□□□□□ -1.42
SEC28YIL076W GSF2Q04697 403 aaKnown RBP6.21□□□□□ -1.42
SEC28YIL076W WHI4Q07655 649 aaKnown RBP6.21□□□□□ -1.42
SEC28YIL076W ADE8P04161 214 aa6.2□□□□□ -1.42
SEC28YIL076W CDC48P25694 835 aaKnown RBP6.2□□□□□ -1.42
SEC28YIL076W ERT1P38140 529 aa6.2□□□□□ -1.42
SEC28YIL076W SIT1P39980 628 aa6.2□□□□□ -1.42
SEC28YIL076W PHO23P50947 330 aa6.2□□□□□ -1.42
SEC28YIL076W FMP25Q08023 583 aa6.2□□□□□ -1.42
SEC28YIL076W NTO1Q12311 748 aa6.2□□□□□ -1.42
SEC28YIL076W KCS1Q12494 1050 aa6.2□□□□□ -1.42
SEC28YIL076W TRM2P33753 639 aa6.19□□□□□ -1.42
SEC28YIL076W ALR2P43553 858 aa6.19□□□□□ -1.42
SEC28YIL076W RAI1P53063 387 aaKnown RBP6.19□□□□□ -1.42
SEC28YIL076W NAN1Q02931 896 aaKnown RBP6.19□□□□□ -1.42
SEC28YIL076W PMA1P05030 918 aaKnown RBP6.18□□□□□ -1.42
SEC28YIL076W ATG19P35193 415 aa6.18□□□□□ -1.42
SEC28YIL076W YBR238CP38330 731 aaKnown RBP6.18□□□□□ -1.42
SEC28YIL076W URM1P40554 99 aaPredicted RBP6.18□□□□□ -1.42
SEC28YIL076W YKE2P52553 114 aa6.18□□□□□ -1.42
SEC28YIL076W NPC2Q12408 173 aa6.18□□□□□ -1.42
SEC28YIL076W DCG1P32460 244 aa6.17□□□□□ -1.42
SEC28YIL076W EXG2P52911 562 aa6.17□□□□□ -1.42
SEC28YIL076W BUL2Q03758 920 aaKnown RBP6.17□□□□□ -1.42
SEC28YIL076W NOT3P06102 836 aaKnown RBP6.16□□□□□ -1.42
SEC28YIL076W NCS6P53088 359 aa6.16□□□□□ -1.42
SEC28YIL076W UBX5Q06682 500 aa6.16□□□□□ -1.42
SEC28YIL076W RAD4P14736 754 aa6.15□□□□□ -1.42
SEC28YIL076W RPL8BP29453 256 aaKnown RBP6.15□□□□□ -1.42
SEC28YIL076W PMI40P29952 429 aaKnown RBP6.15□□□□□ -1.42
SEC28YIL076W YBR284WP38150 797 aa6.15□□□□□ -1.42
SEC28YIL076W TOK1P40310 691 aa6.15□□□□□ -1.42
SEC28YIL076W IOC3P43596 787 aa6.15□□□□□ -1.42
SEC28YIL076W UTP8P53276 713 aaKnown RBP6.15□□□□□ -1.42
SEC28YIL076W EAF1Q06337 982 aa6.15□□□□□ -1.42
SEC28YIL076W SPO75Q07798 868 aa6.15□□□□□ -1.42
SEC28YIL076W CCM1P48237 864 aaPredicted RBP6.14□□□□□ -1.43
SEC28YIL076W MSE1P48525 536 aa6.14□□□□□ -1.43
SEC28YIL076W ERP6P53198 216 aa6.14□□□□□ -1.43
SEC28YIL076W LCD1Q04377 747 aa6.14□□□□□ -1.43
SEC28YIL076W PUS9Q12069 462 aa6.14□□□□□ -1.43
SEC28YIL076W UPC2Q12151 913 aa6.14□□□□□ -1.43
SEC28YIL076W YPR071WQ12346 211 aa6.14□□□□□ -1.43
SEC28YIL076W CDC11P32458 415 aa6.13□□□□□ -1.43
SEC28YIL076W STE13P33894 931 aa6.13□□□□□ -1.43
SEC28YIL076W SUN4P53616 420 aa6.13□□□□□ -1.43
SEC28YIL076W OSH2Q12451 1283 aa6.13□□□□□ -1.43
SEC28YIL076W PFK1P16861 987 aaKnown RBP6.12□□□□□ -1.43
SEC28YIL076W ARE1P25628 610 aa6.12□□□□□ -1.43
SEC28YIL076W AIM21P40563 679 aa6.12□□□□□ -1.43
SEC28YIL076W TIM54P47045 478 aa6.12□□□□□ -1.43
SEC28YIL076W SSL1Q04673 461 aaPredicted RBP6.12□□□□□ -1.43
SEC28YIL076W RFA1P22336 621 aaKnown RBP6.11□□□□□ -1.43
SEC28YIL076W KAR4P25583 335 aa6.11□□□□□ -1.43
SEC28YIL076W RPD3P32561 433 aa6.11□□□□□ -1.43
SEC28YIL076W REC104P33323 182 aa6.11□□□□□ -1.43
SEC28YIL076W DEF1P35732 738 aaKnown RBP6.11□□□□□ -1.43
SEC28YIL076W MSS4P38994 779 aa6.11□□□□□ -1.43
SEC28YIL076W PNS1Q12412 539 aa6.11□□□□□ -1.43
SEC28YIL076W LAS17Q12446 633 aa6.11□□□□□ -1.43
SEC28YIL076W HBN1Q96VH4 193 aa6.11□□□□□ -1.43
SEC28YIL076W MSD1P15179 658 aaKnown RBP6.1□□□□□ -1.43
SEC28YIL076W SED4P25365 1065 aa6.1□□□□□ -1.43
SEC28YIL076W PET10P36139 283 aa6.1□□□□□ -1.43
SEC28YIL076W KIN4Q01919 800 aa6.1□□□□□ -1.43
SEC28YIL076W VPS30Q02948 557 aa6.1□□□□□ -1.43
SEC28YIL076W HSP60P19882 572 aaKnown RBP6.09□□□□□ -1.43
SEC28YIL076W CAD1P24813 409 aaKnown RBP6.09□□□□□ -1.43
SEC28YIL076W STE14P32584 239 aa6.09□□□□□ -1.43
SEC28YIL076W YGR125WP53273 1036 aa6.09□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms