RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W MSN1P22148 382 aa2.45□□□□□ -2.02
RTT107YHR154W NPR1P22211 790 aa2.45□□□□□ -2.02
RTT107YHR154W PPH3P32345 308 aa2.45□□□□□ -2.02
RTT107YHR154W LYP1P32487 611 aa2.45□□□□□ -2.02
RTT107YHR154W PRP19P32523 503 aaKnown RBP2.45□□□□□ -2.02
RTT107YHR154W SWI3P32591 825 aa2.45□□□□□ -2.02
RTT107YHR154W DUT1P33317 147 aa2.45□□□□□ -2.02
RTT107YHR154W ISW1P38144 1129 aa2.45□□□□□ -2.02
RTT107YHR154W GDH3P39708 457 aa2.45□□□□□ -2.02
RTT107YHR154W RCM1P53972 490 aa2.45□□□□□ -2.02
RTT107YHR154W ADE12P80210 433 aaKnown RBP2.45□□□□□ -2.02
RTT107YHR154W EEB1Q02891 456 aa2.45□□□□□ -2.02
RTT107YHR154W ISU1Q03020 165 aa2.45□□□□□ -2.02
RTT107YHR154W UGO1Q03327 502 aa2.45□□□□□ -2.02
RTT107YHR154W FLP1P03870 423 aa2.45□□□□□ -2.02
RTT107YHR154W PHR1P05066 565 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
RTT107YHR154W AGP1P25376 633 aa2.45□□□□□ -2.02
RTT107YHR154W EUG1P32474 517 aa2.45□□□□□ -2.02
RTT107YHR154W TOA1P32773 286 aa2.45□□□□□ -2.02
RTT107YHR154W PIC2P40035 300 aa2.45□□□□□ -2.02
RTT107YHR154W IML2P47031 731 aa2.45□□□□□ -2.02
RTT107YHR154W KRE33P53914 1056 aaKnown RBP2.45□□□□□ -2.02
RTT107YHR154W MET14Q02196 202 aa2.45□□□□□ -2.02
RTT107YHR154W MEH1Q02205 184 aa2.45□□□□□ -2.02
RTT107YHR154W YDR306CQ06640 478 aa2.45□□□□□ -2.02
RTT107YHR154W MPH2P0CD99 609 aa2.44□□□□□ -2.02
RTT107YHR154W SBA1P28707 216 aaKnown RBP2.44□□□□□ -2.02
RTT107YHR154W AAR2P32357 355 aaPredicted RBP2.44□□□□□ -2.02
RTT107YHR154W DOM34P33309 386 aa2.44□□□□□ -2.02
RTT107YHR154W PEX28P38848 579 aa2.44□□□□□ -2.02
RTT107YHR154W AIM46P38885 310 aa2.44□□□□□ -2.02
RTT107YHR154W SHC1P39000 512 aa2.44□□□□□ -2.02
RTT107YHR154W MBP1P39678 833 aa2.44□□□□□ -2.02
RTT107YHR154W NDE1P40215 560 aa2.44□□□□□ -2.02
RTT107YHR154W YIL089WP40500 205 aa2.44□□□□□ -2.02
RTT107YHR154W FIG2P25653 1609 aa2.44□□□□□ -2.02
RTT107YHR154W PTP2P29461 750 aa2.44□□□□□ -2.02
RTT107YHR154W BET3P36149 193 aa2.44□□□□□ -2.02
RTT107YHR154W PFF1P38244 976 aa2.44□□□□□ -2.02
RTT107YHR154W HXT5P38695 592 aa2.44□□□□□ -2.02
RTT107YHR154W PAN5P38787 379 aa2.44□□□□□ -2.02
RTT107YHR154W SKN7P38889 622 aa2.44□□□□□ -2.02
RTT107YHR154W NTA1P40354 457 aa2.44□□□□□ -2.02
RTT107YHR154W YVH1Q02256 364 aaKnown RBP2.44□□□□□ -2.02
RTT107YHR154W TAF8Q03750 510 aa2.44□□□□□ -2.02
RTT107YHR154W PFK1P16861 987 aaKnown RBP2.44□□□□□ -2.02
RTT107YHR154W RAD53P22216 821 aa2.44□□□□□ -2.02
RTT107YHR154W PLC1P32383 869 aa2.44□□□□□ -2.02
RTT107YHR154W NIC96P34077 839 aa2.44□□□□□ -2.02
RTT107YHR154W YKL107WP34251 309 aa2.44□□□□□ -2.02
RTT107YHR154W SEA4P38164 1038 aa2.44□□□□□ -2.02
RTT107YHR154W YBR071WP38243 211 aa2.44□□□□□ -2.02
RTT107YHR154W BSD2P38356 321 aa2.44□□□□□ -2.02
RTT107YHR154W EMW1P42842 904 aaKnown RBP2.44□□□□□ -2.02
RTT107YHR154W YGL176CP46945 554 aa2.44□□□□□ -2.02
RTT107YHR154W PIP2P52960 996 aa2.44□□□□□ -2.02
RTT107YHR154W COG6P53959 839 aa2.44□□□□□ -2.02
RTT107YHR154W SVL3Q03088 825 aaKnown RBP2.44□□□□□ -2.02
RTT107YHR154W TSR2Q06672 205 aaKnown RBP2.44□□□□□ -2.02
RTT107YHR154W HIM1Q06674 414 aa2.44□□□□□ -2.02
RTT107YHR154W YPR071WQ12346 211 aa2.44□□□□□ -2.02
RTT107YHR154W FOB1O13329 566 aa2.43□□□□□ -2.02
RTT107YHR154W HVG1P0CE11 249 aa2.43□□□□□ -2.02
RTT107YHR154W MLF3P32047 452 aa2.43□□□□□ -2.02
RTT107YHR154W FBP26P32604 452 aa2.43□□□□□ -2.02
RTT107YHR154W KTR2P33550 425 aa2.43□□□□□ -2.02
RTT107YHR154W EXO84P38261 753 aa2.43□□□□□ -2.02
RTT107YHR154W MPP10P47083 593 aaKnown RBP2.43□□□□□ -2.02
RTT107YHR154W UTP8P53276 713 aaKnown RBP2.43□□□□□ -2.02
RTT107YHR154W ERO1Q03103 563 aa2.43□□□□□ -2.02
RTT107YHR154W SPC19Q03954 165 aa2.43□□□□□ -2.02
RTT107YHR154W FAS2P19097 1887 aaKnown RBP2.43□□□□□ -2.02
RTT107YHR154W MEF1P25039 761 aa2.43□□□□□ -2.02
RTT107YHR154W PUF4P25339 888 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
RTT107YHR154W MNT3P40549 630 aa2.43□□□□□ -2.02
RTT107YHR154W MTR4P47047 1073 aaKnown RBP2.43□□□□□ -2.02
RTT107YHR154W YNR063WP53749 607 aa2.43□□□□□ -2.02
RTT107YHR154W EAR1Q03212 550 aa2.43□□□□□ -2.02
RTT107YHR154W YMR265CQ03508 461 aaKnown RBP2.43□□□□□ -2.02
RTT107YHR154W TY4B-PA0A0B7P3V8 1104 aa2.42□□□□□ -2.02
RTT107YHR154W GAL1P04385 528 aa2.42□□□□□ -2.02
RTT107YHR154W SPS1P08458 490 aa2.42□□□□□ -2.02
RTT107YHR154W TOP3P13099 656 aa2.42□□□□□ -2.02
RTT107YHR154W PHO81P17442 1178 aa2.42□□□□□ -2.02
RTT107YHR154W CHS3P29465 1165 aa2.42□□□□□ -2.02
RTT107YHR154W APL2P36000 726 aaPredicted RBP2.42□□□□□ -2.02
RTT107YHR154W RVS167P39743 482 aaKnown RBP2.42□□□□□ -2.02
RTT107YHR154W TMA108P40462 946 aa2.42□□□□□ -2.02
RTT107YHR154W HIS6P40545 261 aa2.42□□□□□ -2.02
RTT107YHR154W RGD2P43556 714 aa2.42□□□□□ -2.02
RTT107YHR154W SNU66Q12420 587 aaPredicted RBP2.42□□□□□ -2.02
RTT107YHR154W TY4A-HQ6Q5P6 413 aa2.42□□□□□ -2.02
RTT107YHR154W PIF1P07271 859 aa2.42□□□□□ -2.02
RTT107YHR154W APA1P16550 321 aaKnown RBP2.42□□□□□ -2.02
RTT107YHR154W CDC60P26637 1090 aaKnown RBP2.42□□□□□ -2.02
RTT107YHR154W KTR4P38131 464 aa2.42□□□□□ -2.02
RTT107YHR154W DOT6P40059 670 aaKnown RBP2.42□□□□□ -2.02
RTT107YHR154W NUT1P53114 1132 aa2.42□□□□□ -2.02
RTT107YHR154W ROD1Q02805 837 aa2.42□□□□□ -2.02
RTT107YHR154W SHE9Q04172 456 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms