RNA–Protein interactions for RNA: YHR135C

YCK1, Transcript of Palmitoylated plasma membrane-bound casein kinase I (CK1) isoform, yeastyeast

Gene YCK1, Length 1,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK1YHR135C ADY4Q05955 493 aa6.83□□□□□ -1.32
YCK1YHR135C UTP4Q06679 776 aaKnown RBP6.83□□□□□ -1.32
YCK1YHR135C TY1A-BLQ12266 440 aa6.83□□□□□ -1.32
YCK1YHR135C RPS9BP05755 195 aaKnown RBP6.82□□□□□ -1.32
YCK1YHR135C PET10P36139 283 aa6.82□□□□□ -1.32
YCK1YHR135C ADE17P38009 592 aaKnown RBP6.82□□□□□ -1.32
YCK1YHR135C TIF4631P39935 952 aaKnown RBP6.82□□□□□ -1.32
YCK1YHR135C YGR237CP50089 785 aa6.82□□□□□ -1.32
YCK1YHR135C CAF120P53836 1060 aa6.82□□□□□ -1.32
YCK1YHR135C GFD1Q04839 188 aaKnown RBP6.82□□□□□ -1.32
YCK1YHR135C HCR1Q05775 265 aaKnown RBP6.82□□□□□ -1.32
YCK1YHR135C OXR1Q08952 273 aa6.82□□□□□ -1.32
YCK1YHR135C YPL216WQ08964 1102 aa6.82□□□□□ -1.32
YCK1YHR135C YDL176WQ12027 708 aa6.82□□□□□ -1.32
YCK1YHR135C SPT2P06843 333 aaPredicted RBP6.81□□□□□ -1.32
YCK1YHR135C DAT1P13483 248 aaKnown RBP6.81□□□□□ -1.32
YCK1YHR135C RPL8AP17076 256 aaKnown RBP6.81□□□□□ -1.32
YCK1YHR135C PSO2P30620 661 aa6.81□□□□□ -1.32
YCK1YHR135C MNN4P36044 1178 aa6.81□□□□□ -1.32
YCK1YHR135C TBS1P38114 1094 aa6.81□□□□□ -1.32
YCK1YHR135C RTT107P38850 1070 aa6.81□□□□□ -1.32
YCK1YHR135C NIT1P40447 199 aa6.81□□□□□ -1.32
YCK1YHR135C YOL075CQ08234 1294 aa6.81□□□□□ -1.32
YCK1YHR135C APL4Q12028 832 aa6.81□□□□□ -1.32
YCK1YHR135C YLR278CQ05854 1341 aa6.81□□□□□ -1.32
YCK1YHR135C THS1P04801 734 aaKnown RBP6.8□□□□□ -1.32
YCK1YHR135C GSY1P23337 708 aa6.8□□□□□ -1.32
YCK1YHR135C UTR2P32623 467 aa6.8□□□□□ -1.32
YCK1YHR135C YET1P35723 206 aa6.8□□□□□ -1.32
YCK1YHR135C SOH1P38633 127 aa6.8□□□□□ -1.32
YCK1YHR135C GAA1P39012 614 aa6.8□□□□□ -1.32
YCK1YHR135C PES4P39684 611 aa6.8□□□□□ -1.32
YCK1YHR135C TPM2P40414 161 aa6.8□□□□□ -1.32
YCK1YHR135C TFG2P41896 400 aaPredicted RBP6.8□□□□□ -1.32
YCK1YHR135C OSW7P43611 510 aa6.8□□□□□ -1.32
YCK1YHR135C RIM21P48565 533 aa6.8□□□□□ -1.32
YCK1YHR135C VPS75P53853 264 aa6.8□□□□□ -1.32
YCK1YHR135C CSM3Q04659 317 aa6.8□□□□□ -1.32
YCK1YHR135C TLG2Q08144 397 aa6.8□□□□□ -1.32
YCK1YHR135C CDC37P06101 506 aaKnown RBP6.79□□□□□ -1.32
YCK1YHR135C MSH3P25336 1018 aa6.79□□□□□ -1.32
YCK1YHR135C SEC65P29478 273 aa6.79□□□□□ -1.32
YCK1YHR135C EBP2P36049 427 aaKnown RBP6.79□□□□□ -1.32
YCK1YHR135C SHM1P37292 490 aaPredicted RBP6.79□□□□□ -1.32
YCK1YHR135C SUL1P38359 859 aa6.79□□□□□ -1.32
YCK1YHR135C PAN5P38787 379 aa6.79□□□□□ -1.32
YCK1YHR135C ACA1P39970 489 aa6.79□□□□□ -1.32
YCK1YHR135C THI6P41835 540 aa6.79□□□□□ -1.32
YCK1YHR135C VTC4P47075 721 aa6.79□□□□□ -1.32
YCK1YHR135C LSB1P53281 241 aa6.79□□□□□ -1.32
YCK1YHR135C ESC2Q06340 456 aa6.79□□□□□ -1.32
YCK1YHR135C SPP382Q06411 708 aaPredicted RBP6.79□□□□□ -1.32
YCK1YHR135C ILV1P00927 576 aaKnown RBP6.79□□□□□ -1.32
YCK1YHR135C YEL076C-AP0CX16 216 aa6.79□□□□□ -1.32
YCK1YHR135C YLR464WP0CX17 216 aa6.79□□□□□ -1.32
YCK1YHR135C MRC1P25588 1096 aa6.79□□□□□ -1.32
YCK1YHR135C SPT8P38915 602 aa6.79□□□□□ -1.32
YCK1YHR135C YEL076CP39971 216 aa6.79□□□□□ -1.32
YCK1YHR135C STU2P46675 888 aa6.79□□□□□ -1.32
YCK1YHR135C AIP1P46680 615 aaKnown RBP6.79□□□□□ -1.32
YCK1YHR135C FMS1P50264 508 aa6.79□□□□□ -1.32
YCK1YHR135C EBS1Q03466 884 aaKnown RBP6.79□□□□□ -1.32
YCK1YHR135C YLH47Q06493 454 aa6.79□□□□□ -1.32
YCK1YHR135C WTM2Q12206 467 aa6.79□□□□□ -1.32
YCK1YHR135C RPS6AP0CX37 236 aaKnown RBP6.78□□□□□ -1.32
YCK1YHR135C RPS6BP0CX38 236 aaPredicted RBP6.78□□□□□ -1.32
YCK1YHR135C TIF1P10081 395 aaKnown RBP6.78□□□□□ -1.32
YCK1YHR135C PHO13P19881 312 aa6.78□□□□□ -1.32
YCK1YHR135C RTG2P32608 588 aaKnown RBP6.78□□□□□ -1.32
YCK1YHR135C RPC25P35718 212 aa6.78□□□□□ -1.32
YCK1YHR135C PCH2P38126 564 aa6.78□□□□□ -1.32
YCK1YHR135C TPS3P38426 1054 aaKnown RBP6.78□□□□□ -1.32
YCK1YHR135C OSH7P38755 437 aa6.78□□□□□ -1.32
YCK1YHR135C BCD1P38772 366 aa6.78□□□□□ -1.32
YCK1YHR135C CBK1P53894 756 aa6.78□□□□□ -1.32
YCK1YHR135C CSR2Q12734 1121 aa6.78□□□□□ -1.32
YCK1YHR135C PHR1P05066 565 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
YCK1YHR135C ISY1P21374 235 aaPredicted RBP6.77□□□□□ -1.33
YCK1YHR135C RRP43P25359 394 aaPredicted RBP6.77□□□□□ -1.33
YCK1YHR135C PXL1P36166 706 aa6.77□□□□□ -1.33
YCK1YHR135C VTC2P43585 828 aa6.77□□□□□ -1.33
YCK1YHR135C YML037CQ03703 340 aa6.77□□□□□ -1.33
YCK1YHR135C SMC6Q12749 1114 aa6.77□□□□□ -1.33
YCK1YHR135C FOB1O13329 566 aa6.76□□□□□ -1.33
YCK1YHR135C SRO9P25567 434 aaKnown RBP6.76□□□□□ -1.33
YCK1YHR135C PWP2P25635 923 aaKnown RBP6.76□□□□□ -1.33
YCK1YHR135C SEC20P28791 383 aa6.76□□□□□ -1.33
YCK1YHR135C DAL1P32375 460 aa6.76□□□□□ -1.33
YCK1YHR135C YKL091CP33324 310 aaKnown RBP6.76□□□□□ -1.33
YCK1YHR135C PPS1P38148 807 aa6.76□□□□□ -1.33
YCK1YHR135C PHO88P38264 188 aaPredicted RBP6.76□□□□□ -1.33
YCK1YHR135C PIH1P38768 344 aa6.76□□□□□ -1.33
YCK1YHR135C PGA2P53903 129 aa6.76□□□□□ -1.33
YCK1YHR135C MFM1Q02783 413 aa6.76□□□□□ -1.33
YCK1YHR135C BUL2Q03758 920 aaKnown RBP6.76□□□□□ -1.33
YCK1YHR135C YAP7Q08182 245 aa6.76□□□□□ -1.33
YCK1YHR135C SAM1P10659 382 aaKnown RBP6.76□□□□□ -1.33
YCK1YHR135C SAP190P36123 1033 aa6.76□□□□□ -1.33
YCK1YHR135C MIP6P38760 659 aaKnown RBP6.76□□□□□ -1.33
YCK1YHR135C CTM1P38818 585 aa6.76□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 34.8 ms