RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C PTA1Q01329 785 aaPredicted RBP3.29□□□□□ -1.88
NMD2YHR077C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
NMD2YHR077C YLR287CQ05881 355 aa3.29□□□□□ -1.88
NMD2YHR077C GUD1Q07729 489 aa3.29□□□□□ -1.88
NMD2YHR077C CDC53Q12018 815 aaKnown RBP3.29□□□□□ -1.88
NMD2YHR077C SMC6Q12749 1114 aa3.29□□□□□ -1.88
NMD2YHR077C TOP1P04786 769 aa3.29□□□□□ -1.88
NMD2YHR077C FBP1P09201 348 aa3.29□□□□□ -1.88
NMD2YHR077C RAD18P10862 487 aa3.29□□□□□ -1.88
NMD2YHR077C RRP1P35178 278 aaPredicted RBP3.29□□□□□ -1.88
NMD2YHR077C MMS21P38632 267 aa3.29□□□□□ -1.88
NMD2YHR077C ERC1P38767 581 aa3.29□□□□□ -1.88
NMD2YHR077C YAP5P40574 245 aa3.29□□□□□ -1.88
NMD2YHR077C ZAP1P47043 880 aa3.29□□□□□ -1.88
NMD2YHR077C DUS4Q06063 367 aa3.29□□□□□ -1.88
NMD2YHR077C ATG23Q06671 453 aa3.29□□□□□ -1.88
NMD2YHR077C YPL277CQ08989 487 aa3.29□□□□□ -1.88
NMD2YHR077C RPL8AP17076 256 aaKnown RBP3.28□□□□□ -1.88
NMD2YHR077C FET4P40988 552 aa3.28□□□□□ -1.88
NMD2YHR077C YNL035CP53962 389 aaKnown RBP3.28□□□□□ -1.88
NMD2YHR077C TRM44Q02648 567 aaKnown RBP3.28□□□□□ -1.88
NMD2YHR077C UBX5Q06682 500 aa3.28□□□□□ -1.88
NMD2YHR077C NUR1Q12066 484 aa3.28□□□□□ -1.88
NMD2YHR077C YDL206WQ12424 762 aa3.28□□□□□ -1.88
NMD2YHR077C YOL087CQ99247 1116 aa3.28□□□□□ -1.88
NMD2YHR077C HPR1P17629 752 aaKnown RBP3.28□□□□□ -1.88
NMD2YHR077C GSY1P23337 708 aa3.28□□□□□ -1.88
NMD2YHR077C YDJ1P25491 409 aaKnown RBP3.28□□□□□ -1.88
NMD2YHR077C APL1P27351 700 aa3.28□□□□□ -1.88
NMD2YHR077C SAS3P34218 831 aa3.28□□□□□ -1.88
NMD2YHR077C SHP1P34223 423 aa3.28□□□□□ -1.88
NMD2YHR077C NDC80P40460 691 aa3.28□□□□□ -1.88
NMD2YHR077C FIS1P40515 155 aa3.28□□□□□ -1.88
NMD2YHR077C YNL320WP42840 284 aa3.28□□□□□ -1.88
NMD2YHR077C FYV8P46949 817 aaKnown RBP3.28□□□□□ -1.88
NMD2YHR077C PPM1Q04081 328 aa3.28□□□□□ -1.88
NMD2YHR077C YLR297WQ05899 129 aa3.28□□□□□ -1.88
NMD2YHR077C SPH1Q06160 661 aa3.28□□□□□ -1.88
NMD2YHR077C CUR1Q06469 252 aa3.28□□□□□ -1.88
NMD2YHR077C SAM1P10659 382 aaKnown RBP3.27□□□□□ -1.89
NMD2YHR077C GFA1P14742 717 aaKnown RBP3.27□□□□□ -1.89
NMD2YHR077C EST1P17214 699 aaPredicted RBP3.27□□□□□ -1.89
NMD2YHR077C RPC53P25441 422 aa3.27□□□□□ -1.89
NMD2YHR077C MCD4P36051 919 aa3.27□□□□□ -1.89
NMD2YHR077C RCK2P38623 610 aa3.27□□□□□ -1.89
NMD2YHR077C RAD26P40352 1085 aa3.27□□□□□ -1.89
NMD2YHR077C YJR079WP47126 109 aa3.27□□□□□ -1.89
NMD2YHR077C SNU71P53207 620 aaKnown RBP3.27□□□□□ -1.89
NMD2YHR077C SOL4P53315 255 aa3.27□□□□□ -1.89
NMD2YHR077C MRS2Q01926 470 aa3.27□□□□□ -1.89
NMD2YHR077C YML037CQ03703 340 aa3.27□□□□□ -1.89
NMD2YHR077C CSM3Q04659 317 aa3.27□□□□□ -1.89
NMD2YHR077C CSR1Q06705 408 aaKnown RBP3.27□□□□□ -1.89
NMD2YHR077C NCR1Q12200 1170 aa3.27□□□□□ -1.89
NMD2YHR077C CBP1P07252 654 aa3.27□□□□□ -1.89
NMD2YHR077C CLN3P13365 580 aa3.27□□□□□ -1.89
NMD2YHR077C PRP9P19736 530 aaKnown RBP3.27□□□□□ -1.89
NMD2YHR077C RAD54P32863 898 aa3.27□□□□□ -1.89
NMD2YHR077C ACA1P39970 489 aa3.27□□□□□ -1.89
NMD2YHR077C NIT1P40447 199 aa3.27□□□□□ -1.89
NMD2YHR077C YJL007CP47080 104 aa3.27□□□□□ -1.89
NMD2YHR077C YMR1P47147 688 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
NMD2YHR077C RIM8P53179 542 aa3.27□□□□□ -1.89
NMD2YHR077C TAM41P53230 385 aa3.27□□□□□ -1.89
NMD2YHR077C SEC5P89102 971 aa3.27□□□□□ -1.89
NMD2YHR077C UTP5Q04177 643 aaKnown RBP3.27□□□□□ -1.89
NMD2YHR077C TDA9Q04545 1251 aa3.27□□□□□ -1.89
NMD2YHR077C DUS3Q06053 668 aaKnown RBP3.27□□□□□ -1.89
NMD2YHR077C PLP2Q12017 286 aa3.27□□□□□ -1.89
NMD2YHR077C PCK1P10963 549 aa3.27□□□□□ -1.89
NMD2YHR077C OM45P16547 393 aa3.27□□□□□ -1.89
NMD2YHR077C CDC42P19073 191 aa3.27□□□□□ -1.89
NMD2YHR077C MRM1P25270 412 aa3.27□□□□□ -1.89
NMD2YHR077C XRS2P33301 854 aa3.27□□□□□ -1.89
NMD2YHR077C DBP7P36120 742 aaKnown RBP3.27□□□□□ -1.89
NMD2YHR077C VPS41P38959 992 aa3.27□□□□□ -1.89
NMD2YHR077C CAJ1P39101 391 aa3.27□□□□□ -1.89
NMD2YHR077C YMR124WP39523 943 aaKnown RBP3.27□□□□□ -1.89
NMD2YHR077C ENV11P53246 860 aa3.27□□□□□ -1.89
NMD2YHR077C ESBP6P53918 673 aa3.27□□□□□ -1.89
NMD2YHR077C ROD1Q02805 837 aa3.27□□□□□ -1.89
NMD2YHR077C URH1Q04179 340 aa3.27□□□□□ -1.89
NMD2YHR077C VTI1Q04338 217 aa3.27□□□□□ -1.89
NMD2YHR077C RBA50Q04418 439 aa3.27□□□□□ -1.89
NMD2YHR077C UTP14Q04500 899 aaKnown RBP3.27□□□□□ -1.89
NMD2YHR077C CRF1Q04930 467 aa3.27□□□□□ -1.89
NMD2YHR077C SRD1P09007 221 aa3.26□□□□□ -1.89
NMD2YHR077C YSC83P32792 385 aa3.26□□□□□ -1.89
NMD2YHR077C SAP1P39955 897 aaKnown RBP3.26□□□□□ -1.89
NMD2YHR077C NMD5P46970 1048 aa3.26□□□□□ -1.89
NMD2YHR077C LIF1P53150 421 aa3.26□□□□□ -1.89
NMD2YHR077C TOF1P53840 1238 aa3.26□□□□□ -1.89
NMD2YHR077C YMR102CQ03177 834 aa3.26□□□□□ -1.89
NMD2YHR077C ECI1Q05871 280 aa3.26□□□□□ -1.89
NMD2YHR077C ISA1Q07821 250 aaPredicted RBP3.26□□□□□ -1.89
NMD2YHR077C MED1Q12321 566 aa3.26□□□□□ -1.89
NMD2YHR077C MSM1P22438 575 aa3.26□□□□□ -1.89
NMD2YHR077C YKL023WP36103 277 aaKnown RBP3.26□□□□□ -1.89
NMD2YHR077C ASG1P40467 964 aa3.26□□□□□ -1.89
NMD2YHR077C YGL140CP53120 1219 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms