RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C ARP8Q12386 881 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
RPN1YHR027C NOT5Q12514 560 aaPredicted RBP3.35□□□□□ -1.87
RPN1YHR027C SBP1P10080 294 aaKnown RBP3.35□□□□□ -1.87
RPN1YHR027C SNA3P14359 133 aa3.35□□□□□ -1.87
RPN1YHR027C MRPL25P23369 157 aa3.35□□□□□ -1.87
RPN1YHR027C ADY2P25613 283 aa3.35□□□□□ -1.87
RPN1YHR027C KIP1P28742 1111 aa3.35□□□□□ -1.87
RPN1YHR027C ACP1P32463 125 aa3.35□□□□□ -1.87
RPN1YHR027C NIP1P32497 812 aaKnown RBP3.35□□□□□ -1.87
RPN1YHR027C SLX5P32828 619 aaKnown RBP3.35□□□□□ -1.87
RPN1YHR027C CNS1P33313 385 aa3.35□□□□□ -1.87
RPN1YHR027C TFC4P33339 1025 aa3.35□□□□□ -1.87
RPN1YHR027C GEF1P37020 779 aa3.35□□□□□ -1.87
RPN1YHR027C MRX3P38172 270 aa3.35□□□□□ -1.87
RPN1YHR027C HEK2P38199 381 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
RPN1YHR027C SMF1P38925 575 aa3.35□□□□□ -1.87
RPN1YHR027C MET12P46151 657 aa3.35□□□□□ -1.87
RPN1YHR027C IML2P47031 731 aa3.35□□□□□ -1.87
RPN1YHR027C SSN8P47821 323 aa3.35□□□□□ -1.87
RPN1YHR027C CEG1Q01159 459 aaPredicted RBP3.35□□□□□ -1.87
RPN1YHR027C VPS38Q05919 439 aa3.35□□□□□ -1.87
RPN1YHR027C SYO1Q07395 620 aa3.35□□□□□ -1.87
RPN1YHR027C RRP6Q12149 733 aaKnown RBP3.35□□□□□ -1.87
RPN1YHR027C ACF2Q12168 779 aa3.35□□□□□ -1.87
RPN1YHR027C BCK1Q01389 1478 aa3.35□□□□□ -1.87
RPN1YHR027C POM152P39685 1337 aa3.34□□□□□ -1.87
RPN1YHR027C PYC1P11154 1178 aaKnown RBP3.34□□□□□ -1.87
RPN1YHR027C KIN2P13186 1147 aaKnown RBP3.34□□□□□ -1.87
RPN1YHR027C CNA1P23287 553 aa3.34□□□□□ -1.87
RPN1YHR027C PHO3P24031 467 aa3.34□□□□□ -1.87
RPN1YHR027C DPB2P24482 689 aaPredicted RBP3.34□□□□□ -1.87
RPN1YHR027C RRP43P25359 394 aaPredicted RBP3.34□□□□□ -1.87
RPN1YHR027C VPH2P32341 215 aa3.34□□□□□ -1.87
RPN1YHR027C YKL063CP35725 167 aa3.34□□□□□ -1.87
RPN1YHR027C MRPL40P36534 297 aa3.34□□□□□ -1.87
RPN1YHR027C FES1P38260 290 aa3.34□□□□□ -1.87
RPN1YHR027C VMA22P38784 181 aa3.34□□□□□ -1.87
RPN1YHR027C IRR1P40541 1150 aa3.34□□□□□ -1.87
RPN1YHR027C RLP7P40693 322 aaKnown RBP3.34□□□□□ -1.87
RPN1YHR027C ALB1P47019 175 aaPredicted RBP3.34□□□□□ -1.87
RPN1YHR027C URB2P47108 1174 aa3.34□□□□□ -1.87
RPN1YHR027C HAM1P47119 197 aaKnown RBP3.34□□□□□ -1.87
RPN1YHR027C CTF18P49956 741 aa3.34□□□□□ -1.87
RPN1YHR027C UBA2P52488 636 aa3.34□□□□□ -1.87
RPN1YHR027C YGR054WP53235 642 aaKnown RBP3.34□□□□□ -1.87
RPN1YHR027C DIP5P53388 608 aa3.34□□□□□ -1.87
RPN1YHR027C YNL144CP53907 740 aa3.34□□□□□ -1.87
RPN1YHR027C USA1Q03714 838 aa3.34□□□□□ -1.87
RPN1YHR027C YDR179W-AQ03983 463 aa3.34□□□□□ -1.87
RPN1YHR027C RSA1Q08932 381 aa3.34□□□□□ -1.87
RPN1YHR027C YOR289WQ12012 251 aaPredicted RBP3.34□□□□□ -1.87
RPN1YHR027C VIK1Q12045 647 aa3.34□□□□□ -1.87
RPN1YHR027C RTC5Q12108 567 aaKnown RBP3.34□□□□□ -1.87
RPN1YHR027C GET4Q12125 312 aa3.34□□□□□ -1.87
RPN1YHR027C ATP16Q12165 160 aa3.34□□□□□ -1.87
RPN1YHR027C RPS3P05750 240 aaKnown RBP3.34□□□□□ -1.87
RPN1YHR027C NMT1P14743 455 aa3.34□□□□□ -1.87
RPN1YHR027C PRP4P20053 465 aaKnown RBP3.34□□□□□ -1.87
RPN1YHR027C BMH1P29311 267 aaKnown RBP3.34□□□□□ -1.87
RPN1YHR027C CBF2P32504 956 aa3.34□□□□□ -1.87
RPN1YHR027C BMH2P34730 273 aaKnown RBP3.34□□□□□ -1.87
RPN1YHR027C HXT6P39003 570 aaKnown RBP3.34□□□□□ -1.87
RPN1YHR027C HXT7P39004 570 aa3.34□□□□□ -1.87
RPN1YHR027C MKT1P40850 830 aaKnown RBP3.34□□□□□ -1.87
RPN1YHR027C YJR054WP47114 497 aa3.34□□□□□ -1.87
RPN1YHR027C ZPR1P53303 486 aaKnown RBP3.34□□□□□ -1.87
RPN1YHR027C RPM2Q02773 1202 aa3.34□□□□□ -1.87
RPN1YHR027C ATP25Q03153 612 aa3.34□□□□□ -1.87
RPN1YHR027C VPS16Q03308 798 aa3.34□□□□□ -1.87
RPN1YHR027C TAF9Q05027 157 aa3.34□□□□□ -1.87
RPN1YHR027C VAC14Q06708 880 aa3.34□□□□□ -1.87
RPN1YHR027C MDM36Q06820 579 aa3.34□□□□□ -1.87
RPN1YHR027C NCR1Q12200 1170 aa3.34□□□□□ -1.87
RPN1YHR027C YRM1Q12340 786 aa3.34□□□□□ -1.87
RPN1YHR027C SNU66Q12420 587 aaPredicted RBP3.34□□□□□ -1.87
RPN1YHR027C JIP3O13555 125 aa3.33□□□□□ -1.88
RPN1YHR027C TEF1P02994 458 aaKnown RBP3.33□□□□□ -1.88
RPN1YHR027C PDC1P06169 563 aaKnown RBP3.33□□□□□ -1.88
RPN1YHR027C MPH3P0CE00 602 aa3.33□□□□□ -1.88
RPN1YHR027C PEP12P32854 288 aa3.33□□□□□ -1.88
RPN1YHR027C SSO1P32867 290 aa3.33□□□□□ -1.88
RPN1YHR027C UBC6P33296 250 aaPredicted RBP3.33□□□□□ -1.88
RPN1YHR027C YNG2P38806 282 aaKnown RBP3.33□□□□□ -1.88
RPN1YHR027C STN1P38960 494 aa3.33□□□□□ -1.88
RPN1YHR027C PIK1P39104 1066 aa3.33□□□□□ -1.88
RPN1YHR027C YER156CP40093 338 aaKnown RBP3.33□□□□□ -1.88
RPN1YHR027C RNR4P49723 345 aaKnown RBP3.33□□□□□ -1.88
RPN1YHR027C SPO1P53541 631 aa3.33□□□□□ -1.88
RPN1YHR027C UFD2P54860 961 aa3.33□□□□□ -1.88
RPN1YHR027C SNZ1Q03148 297 aa3.33□□□□□ -1.88
RPN1YHR027C DYN3Q04949 312 aa3.33□□□□□ -1.88
RPN1YHR027C COA4Q05809 96 aa3.33□□□□□ -1.88
RPN1YHR027C CSR1Q06705 408 aaKnown RBP3.33□□□□□ -1.88
RPN1YHR027C DCS2Q12123 353 aa3.33□□□□□ -1.88
RPN1YHR027C RSF2P46974 1380 aa3.33□□□□□ -1.88
RPN1YHR027C ARG4P04076 463 aaPredicted RBP3.33□□□□□ -1.88
RPN1YHR027C DCD1P06773 312 aa3.33□□□□□ -1.88
RPN1YHR027C SUP45P12385 437 aaKnown RBP3.33□□□□□ -1.88
RPN1YHR027C PRP6P19735 899 aaPredicted RBP3.33□□□□□ -1.88
RPN1YHR027C OCA4P25366 362 aa3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 171.7 ms