RNA–Protein interactions for RNA: YHR026W

VMA16, Transcript of Subunit c'' of the vacuolar ATPase, yeastyeast

Gene VMA16, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA16YHR026W YGR125WP53273 1036 aa6.46□□□□□ -1.38
VMA16YHR026W RAD50P12753 1312 aa6.46□□□□□ -1.38
VMA16YHR026W GPM1P00950 247 aaKnown RBP6.45□□□□□ -1.38
VMA16YHR026W TRK2P28584 889 aa6.45□□□□□ -1.38
VMA16YHR026W UTR4P32626 227 aa6.45□□□□□ -1.38
VMA16YHR026W GRX7P38068 203 aa6.45□□□□□ -1.38
VMA16YHR026W SPO1P53541 631 aa6.45□□□□□ -1.38
VMA16YHR026W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.45□□□□□ -1.38 RIP-Chip
VMA16YHR026W RPN7Q06103 429 aaKnown RBP6.45□□□□□ -1.38
VMA16YHR026W PDC5P16467 563 aaKnown RBP6.44□□□□□ -1.38
VMA16YHR026W SRM1P21827 482 aa6.44□□□□□ -1.38
VMA16YHR026W SEC20P28791 383 aa6.44□□□□□ -1.38
VMA16YHR026W PPX1P38698 397 aa6.44□□□□□ -1.38
VMA16YHR026W VID30P53076 958 aa6.44□□□□□ -1.38
VMA16YHR026W ALD6P54115 500 aaKnown RBP6.44□□□□□ -1.38
VMA16YHR026W DAK1P54838 584 aaKnown RBP6.44□□□□□ -1.38
VMA16YHR026W RTP1Q12751 981 aa6.44□□□□□ -1.38
VMA16YHR026W ECM29P38737 1868 aa6.44□□□□□ -1.38
VMA16YHR026W MET4P32389 672 aa6.43□□□□□ -1.38
VMA16YHR026W GCD7P32502 381 aaPredicted RBP6.43□□□□□ -1.38
VMA16YHR026W NMD2P38798 1089 aaKnown RBP6.43□□□□□ -1.38
VMA16YHR026W VPS53P47061 822 aa6.43□□□□□ -1.38
VMA16YHR026W SOL4P53315 255 aa6.43□□□□□ -1.38
VMA16YHR026W CDC55Q00362 526 aa6.43□□□□□ -1.38
VMA16YHR026W RSC4Q02206 625 aa6.43□□□□□ -1.38
VMA16YHR026W CDC16P09798 840 aa6.42□□□□□ -1.38
VMA16YHR026W PCT1P13259 424 aa6.42□□□□□ -1.38
VMA16YHR026W POX1P13711 748 aa6.42□□□□□ -1.38
VMA16YHR026W YUR1P26725 428 aa6.42□□□□□ -1.38
VMA16YHR026W POT1P27796 417 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
VMA16YHR026W RDH54P38086 958 aa6.42□□□□□ -1.38
VMA16YHR026W RFC1P38630 861 aaKnown RBP6.42□□□□□ -1.38
VMA16YHR026W SLD5Q03406 294 aa6.42□□□□□ -1.38
VMA16YHR026W BSC2Q05611 235 aa6.42□□□□□ -1.38
VMA16YHR026W NKP2Q06162 153 aa6.42□□□□□ -1.38
VMA16YHR026W YPL260WQ08977 551 aa6.42□□□□□ -1.38
VMA16YHR026W UBR2Q07963 1872 aa6.42□□□□□ -1.38
VMA16YHR026W TOR1P35169 2470 aa6.41□□□□□ -1.38
VMA16YHR026W RAD18P10862 487 aa6.41□□□□□ -1.38
VMA16YHR026W CLC1P17891 233 aa6.41□□□□□ -1.38
VMA16YHR026W PYC2P32327 1180 aaKnown RBP6.41□□□□□ -1.38
VMA16YHR026W GPT2P36148 743 aa6.41□□□□□ -1.38
VMA16YHR026W SCS3P53012 380 aa6.41□□□□□ -1.38
VMA16YHR026W CTR9P89105 1077 aa6.41□□□□□ -1.38
VMA16YHR026W SKG3Q06315 1026 aa6.41□□□□□ -1.38
VMA16YHR026W RSC2Q06488 889 aa6.41□□□□□ -1.38
VMA16YHR026W LSP1Q12230 341 aaKnown RBP6.41□□□□□ -1.38
VMA16YHR026W LAM4P38800 1345 aa6.41□□□□□ -1.38
VMA16YHR026W TOR2P32600 2474 aaKnown RBP6.4□□□□□ -1.38
VMA16YHR026W CAD1P24813 409 aaKnown RBP6.4□□□□□ -1.38
VMA16YHR026W MCM4P30665 933 aaKnown RBP6.4□□□□□ -1.38
VMA16YHR026W KNS1P32350 737 aaPredicted RBP6.4□□□□□ -1.38
VMA16YHR026W TIM23P32897 222 aa6.4□□□□□ -1.38
VMA16YHR026W VPS24P36095 224 aaKnown RBP6.4□□□□□ -1.38
VMA16YHR026W YHL008CP38750 627 aa6.4□□□□□ -1.38
VMA16YHR026W SNF7P39929 240 aaKnown RBP6.4□□□□□ -1.38
VMA16YHR026W SBE2P42223 864 aaKnown RBP6.4□□□□□ -1.38
VMA16YHR026W VPS72Q03388 795 aa6.4□□□□□ -1.38
VMA16YHR026W PHR1P05066 565 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
VMA16YHR026W SAM1P10659 382 aaKnown RBP6.39□□□□□ -1.39
VMA16YHR026W POA1P38218 177 aa6.39□□□□□ -1.39
VMA16YHR026W ECM2P38241 364 aaKnown RBP6.39□□□□□ -1.39
VMA16YHR026W OYE3P41816 400 aaPredicted RBP6.39□□□□□ -1.39
VMA16YHR026W SGM1P47166 707 aa6.39□□□□□ -1.39
VMA16YHR026W YGL039WP53183 348 aaKnown RBP6.39□□□□□ -1.39
VMA16YHR026W ISA1Q07821 250 aaPredicted RBP6.39□□□□□ -1.39
VMA16YHR026W THI72Q08579 599 aa6.39□□□□□ -1.39
VMA16YHR026W TFC4P33339 1025 aa6.38□□□□□ -1.39
VMA16YHR026W MDJ1P35191 511 aa6.38□□□□□ -1.39
VMA16YHR026W PGM2P37012 569 aaKnown RBP6.38□□□□□ -1.39
VMA16YHR026W INP51P40559 946 aaKnown RBP6.38□□□□□ -1.39
VMA16YHR026W NOC3Q07896 663 aaPredicted RBP6.38□□□□□ -1.39
VMA16YHR026W ERP3Q12403 225 aa6.38□□□□□ -1.39
VMA16YHR026W TRM11Q12463 433 aa6.38□□□□□ -1.39
VMA16YHR026W PHO4P07270 312 aaKnown RBP6.37□□□□□ -1.39
VMA16YHR026W NAR1P23503 491 aaKnown RBP6.37□□□□□ -1.39
VMA16YHR026W ROX1P25042 368 aa6.37□□□□□ -1.39
VMA16YHR026W HEM3P28789 327 aa6.37□□□□□ -1.39
VMA16YHR026W DUR3P33413 735 aa6.37□□□□□ -1.39
VMA16YHR026W SHP1P34223 423 aa6.37□□□□□ -1.39
VMA16YHR026W ALG14P38242 237 aa6.37□□□□□ -1.39
VMA16YHR026W PHO88P38264 188 aaPredicted RBP6.37□□□□□ -1.39
VMA16YHR026W SAM37P50110 327 aa6.37□□□□□ -1.39
VMA16YHR026W NCB2Q92317 146 aa6.37□□□□□ -1.39
VMA16YHR026W NUM1Q00402 2748 aa6.37□□□□□ -1.39
VMA16YHR026W AI1P03875 834 aa6.36□□□□□ -1.39
VMA16YHR026W FUS1P11710 512 aa6.36□□□□□ -1.39
VMA16YHR026W SNA3P14359 133 aa6.36□□□□□ -1.39
VMA16YHR026W ATE1P16639 503 aa6.36□□□□□ -1.39
VMA16YHR026W SAM2P19358 384 aaKnown RBP6.36□□□□□ -1.39
VMA16YHR026W CHS3P29465 1165 aa6.36□□□□□ -1.39
VMA16YHR026W TGL1P34163 548 aa6.36□□□□□ -1.39
VMA16YHR026W DBP7P36120 742 aaKnown RBP6.36□□□□□ -1.39
VMA16YHR026W TFA2P36145 328 aa6.36□□□□□ -1.39
VMA16YHR026W DAK2P43550 591 aa6.36□□□□□ -1.39
VMA16YHR026W IOC3P43596 787 aa6.36□□□□□ -1.39
VMA16YHR026W AZR1P50080 613 aa6.36□□□□□ -1.39
VMA16YHR026W SOK2P53438 785 aaPredicted RBP6.36□□□□□ -1.39
VMA16YHR026W EMI2Q04409 500 aaKnown RBP6.36□□□□□ -1.39
VMA16YHR026W SPH1Q06160 661 aa6.36□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms