RNA–Protein interactions for RNA: YGR215W

RSM27, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM27, Length 333 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM27	YGR215W	FLC1	Q08967	793 aa		5.44	□□□□□ -1.54
RSM27	YGR215W	AFR1	P33304	620 aa		5.43	□□□□□ -1.54
RSM27	YGR215W	THI80	P35202	319 aa		5.43	□□□□□ -1.54
RSM27	YGR215W	TSL1	P38427	1098 aa	Known RBP	5.43	□□□□□ -1.54
RSM27	YGR215W	MND2	P40577	368 aa		5.43	□□□□□ -1.54
RSM27	YGR215W	UTP8	P53276	713 aa	Known RBP	5.43	□□□□□ -1.54
RSM27	YGR215W	YDR132C	Q03900	495 aa		5.43	□□□□□ -1.54
RSM27	YGR215W	BDF2	Q07442	638 aa		5.43	□□□□□ -1.54
RSM27	YGR215W	GPB1	Q08886	897 aa		5.43	□□□□□ -1.54
RSM27	YGR215W	YOL098C	Q12496	1037 aa		5.43	□□□□□ -1.54
RSM27	YGR215W	CIT1	P00890	479 aa		5.42	□□□□□ -1.54
RSM27	YGR215W	CDC11	P32458	415 aa		5.42	□□□□□ -1.54
RSM27	YGR215W	SRP40	P32583	406 aa	Predicted RBP	5.42	□□□□□ -1.54
RSM27	YGR215W	YHR020W	P38708	688 aa	Known RBP	5.42	□□□□□ -1.54
RSM27	YGR215W	GYP7	P48365	746 aa		5.42	□□□□□ -1.54
RSM27	YGR215W	YGR012W	P53206	393 aa		5.42	□□□□□ -1.54
RSM27	YGR215W	PBP1	P53297	722 aa	Known RBP	5.42	□□□□□ -1.54
RSM27	YGR215W	NSE3	Q05541	303 aa		5.42	□□□□□ -1.54
RSM27	YGR215W	DUS4	Q06063	367 aa		5.42	□□□□□ -1.54
RSM27	YGR215W	HBN1	Q96VH4	193 aa		5.42	□□□□□ -1.54
RSM27	YGR215W	CDC48	P25694	835 aa	Known RBP	5.41	□□□□□ -1.54
RSM27	YGR215W	POA1	P38218	177 aa		5.41	□□□□□ -1.54
RSM27	YGR215W	SIT1	P39980	628 aa		5.41	□□□□□ -1.54
RSM27	YGR215W	TOK1	P40310	691 aa		5.41	□□□□□ -1.54
RSM27	YGR215W	YAP6	Q03935	383 aa		5.41	□□□□□ -1.54
RSM27	YGR215W	RXT3	Q07458	294 aa		5.41	□□□□□ -1.54
RSM27	YGR215W	TPO1	Q07824	586 aa		5.41	□□□□□ -1.54
RSM27	YGR215W	TOP3	P13099	656 aa		5.4	□□□□□ -1.54
RSM27	YGR215W	MSD1	P15179	658 aa	Known RBP	5.4	□□□□□ -1.54
RSM27	YGR215W	EMC1	P25574	760 aa		5.4	□□□□□ -1.54
RSM27	YGR215W	YKL091C	P33324	310 aa	Known RBP	5.4	□□□□□ -1.54
RSM27	YGR215W	OCA5	P38738	679 aa		5.4	□□□□□ -1.54
RSM27	YGR215W	HUL4	P40985	892 aa		5.4	□□□□□ -1.54
RSM27	YGR215W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.4	□□□□□ -1.54	not detected
RSM27	YGR215W	LCD1	Q04377	747 aa		5.4	□□□□□ -1.54
RSM27	YGR215W	CDA1	Q06702	301 aa		5.4	□□□□□ -1.54
RSM27	YGR215W	RSP5	P39940	809 aa	Known RBP	5.39	□□□□□ -1.55
RSM27	YGR215W	TAF8	Q03750	510 aa		5.39	□□□□□ -1.55
RSM27	YGR215W	YDL124W	Q07551	312 aa	Known RBP	5.39	□□□□□ -1.55
RSM27	YGR215W	ACK1	Q07622	623 aa	Predicted RBP	5.39	□□□□□ -1.55
RSM27	YGR215W	YOR131C	Q12486	218 aa		5.39	□□□□□ -1.55
RSM27	YGR215W	TOM70	P07213	617 aa	Known RBP	5.38	□□□□□ -1.55
RSM27	YGR215W	CDC6	P09119	513 aa		5.38	□□□□□ -1.55
RSM27	YGR215W	HSF1	P10961	833 aa		5.38	□□□□□ -1.55
RSM27	YGR215W	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.38	□□□□□ -1.55	not detected
RSM27	YGR215W	CDC20	P26309	610 aa		5.38	□□□□□ -1.55
RSM27	YGR215W	YKR078W	P36158	585 aa	Known RBP	5.38	□□□□□ -1.55
RSM27	YGR215W	BUL2	Q03758	920 aa	Known RBP	5.38	□□□□□ -1.55
RSM27	YGR215W	HMI1	Q12039	706 aa		5.38	□□□□□ -1.55
RSM27	YGR215W	CAN1	P04817	590 aa		5.37	□□□□□ -1.55
RSM27	YGR215W	NOT3	P06102	836 aa	Known RBP	5.37	□□□□□ -1.55
RSM27	YGR215W	SPE1	P08432	466 aa		5.37	□□□□□ -1.55
RSM27	YGR215W	REC104	P33323	182 aa		5.37	□□□□□ -1.55
RSM27	YGR215W	PET10	P36139	283 aa		5.37	□□□□□ -1.55
RSM27	YGR215W	CCM1	P48237	864 aa	Predicted RBP	5.37	□□□□□ -1.55
RSM27	YGR215W	PSP2	P50109	593 aa	Known RBP	5.37	□□□□□ -1.55
RSM27	YGR215W	VPS62	P53285	467 aa		5.37	□□□□□ -1.55
RSM27	YGR215W	TMA10	Q06177	86 aa		5.37	□□□□□ -1.55
RSM27	YGR215W	YLR358C	O13565	187 aa		5.36	□□□□□ -1.55
RSM27	YGR215W	GAL11	P19659	1081 aa		5.36	□□□□□ -1.55
RSM27	YGR215W	RFA1	P22336	621 aa	Known RBP	5.36	□□□□□ -1.55
RSM27	YGR215W	BET3	P36149	193 aa		5.36	□□□□□ -1.55
RSM27	YGR215W	FLR1	P38124	548 aa		5.36	□□□□□ -1.55
RSM27	YGR215W	RTA1	P53047	317 aa		5.36	□□□□□ -1.55
RSM27	YGR215W	RAI1	P53063	387 aa	Known RBP	5.36	□□□□□ -1.55
RSM27	YGR215W	WHI4	Q07655	649 aa	Known RBP	5.36	□□□□□ -1.55
RSM27	YGR215W	ADY3	Q07732	790 aa		5.36	□□□□□ -1.55
RSM27	YGR215W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.35	□□□□□ -1.55	not detected
RSM27	YGR215W	RPC82	P32349	654 aa		5.35	□□□□□ -1.55
RSM27	YGR215W	DOM34	P33309	386 aa		5.35	□□□□□ -1.55
RSM27	YGR215W	MET12	P46151	657 aa		5.35	□□□□□ -1.55
RSM27	YGR215W	TAF1	P46677	1066 aa		5.35	□□□□□ -1.55
RSM27	YGR215W	YLR224W	Q05947	369 aa		5.35	□□□□□ -1.55
RSM27	YGR215W	ESC8	Q08119	714 aa		5.35	□□□□□ -1.55
RSM27	YGR215W	RPD3	P32561	433 aa		5.34	□□□□□ -1.55
RSM27	YGR215W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.34	□□□□□ -1.55	not detected
RSM27	YGR215W	CEP3	P40969	608 aa		5.34	□□□□□ -1.55
RSM27	YGR215W	UBP6	P43593	499 aa	Known RBP	5.34	□□□□□ -1.55
RSM27	YGR215W	YKE2	P52553	114 aa		5.34	□□□□□ -1.55
RSM27	YGR215W	HIS5	P07172	385 aa		5.33	□□□□□ -1.56
RSM27	YGR215W	ERR1	P0CX10	437 aa		5.33	□□□□□ -1.56
RSM27	YGR215W	ERR2	P0CX11	437 aa		5.33	□□□□□ -1.56
RSM27	YGR215W	LST4	P34239	828 aa		5.33	□□□□□ -1.56
RSM27	YGR215W	YKL222C	P35995	705 aa		5.33	□□□□□ -1.56
RSM27	YGR215W	YBR238C	P38330	731 aa	Known RBP	5.33	□□□□□ -1.56
RSM27	YGR215W	GGA2	P38817	585 aa	Known RBP	5.33	□□□□□ -1.56
RSM27	YGR215W	PLB1	P39105	664 aa		5.33	□□□□□ -1.56
RSM27	YGR215W	CLU1	Q03690	1277 aa	Known RBP	5.33	□□□□□ -1.56
RSM27	YGR215W	NOP12	Q08208	459 aa	Known RBP	5.33	□□□□□ -1.56
RSM27	YGR215W	TIM23	P32897	222 aa		5.32	□□□□□ -1.56
RSM27	YGR215W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.32	□□□□□ -1.56	not detected
RSM27	YGR215W	SSL1	Q04673	461 aa	Predicted RBP	5.32	□□□□□ -1.56
RSM27	YGR215W	ENV7	Q12003	364 aa		5.32	□□□□□ -1.56
RSM27	YGR215W	STE13	P33894	931 aa		5.31	□□□□□ -1.56
RSM27	YGR215W	GIP4	P39732	760 aa		5.31	□□□□□ -1.56
RSM27	YGR215W	MCM6	P53091	1017 aa	Known RBP	5.31	□□□□□ -1.56
RSM27	YGR215W	VPS30	Q02948	557 aa		5.31	□□□□□ -1.56
RSM27	YGR215W	RPN4	Q03465	531 aa		5.31	□□□□□ -1.56
RSM27	YGR215W	RPS9A	O13516	197 aa	Known RBP	5.3	□□□□□ -1.56
RSM27	YGR215W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.3	□□□□□ -1.56	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 79.2 ms