RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeast

Gene VMA21, Length 234 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA21	YGR105W	CDA1	Q06702	301 aa		4.73	□□□□□ -1.65
VMA21	YGR105W	FMP25	Q08023	583 aa		4.73	□□□□□ -1.65
VMA21	YGR105W	ADE8	P04161	214 aa		4.72	□□□□□ -1.65
VMA21	YGR105W	HBS1	P32769	611 aa	Known RBP	4.72	□□□□□ -1.65
VMA21	YGR105W	AFR1	P33304	620 aa		4.72	□□□□□ -1.65
VMA21	YGR105W	LST4	P34239	828 aa		4.72	□□□□□ -1.65
VMA21	YGR105W	SHM2	P37291	469 aa	Known RBP	4.72	□□□□□ -1.65
VMA21	YGR105W	YRO2	P38079	344 aa		4.72	□□□□□ -1.65
VMA21	YGR105W	ERT1	P38140	529 aa		4.72	□□□□□ -1.65
VMA21	YGR105W	TSL1	P38427	1098 aa	Known RBP	4.72	□□□□□ -1.65
VMA21	YGR105W	YER158C	P40095	573 aa		4.72	□□□□□ -1.65
VMA21	YGR105W	ALR2	P43553	858 aa		4.72	□□□□□ -1.65
VMA21	YGR105W	NAN1	Q02931	896 aa	Known RBP	4.72	□□□□□ -1.65
VMA21	YGR105W	TMA10	Q06177	86 aa		4.72	□□□□□ -1.65
VMA21	YGR105W	YPR196W	Q06595	470 aa		4.72	□□□□□ -1.65
VMA21	YGR105W	UBX5	Q06682	500 aa		4.72	□□□□□ -1.65
VMA21	YGR105W	ADY3	Q07732	790 aa		4.72	□□□□□ -1.65
VMA21	YGR105W	RAD4	P14736	754 aa		4.71	□□□□□ -1.66
VMA21	YGR105W	PRP9	P19736	530 aa	Known RBP	4.71	□□□□□ -1.66
VMA21	YGR105W	CTS1	P29029	562 aa		4.71	□□□□□ -1.66
VMA21	YGR105W	RPL8B	P29453	256 aa	Known RBP	4.71	□□□□□ -1.66
VMA21	YGR105W	MET12	P46151	657 aa		4.71	□□□□□ -1.66
VMA21	YGR105W	HIS5	P07172	385 aa		4.7	□□□□□ -1.66
VMA21	YGR105W	SPE1	P08432	466 aa		4.7	□□□□□ -1.66
VMA21	YGR105W	HSF1	P10961	833 aa		4.7	□□□□□ -1.66
VMA21	YGR105W	YBR284W	P38150	797 aa		4.7	□□□□□ -1.66
VMA21	YGR105W	PLB1	P39105	664 aa		4.7	□□□□□ -1.66
VMA21	YGR105W	MCM6	P53091	1017 aa	Known RBP	4.7	□□□□□ -1.66
VMA21	YGR105W	EAF1	Q06337	982 aa		4.7	□□□□□ -1.66
VMA21	YGR105W	SPO75	Q07798	868 aa		4.7	□□□□□ -1.66
VMA21	YGR105W	NOP12	Q08208	459 aa	Known RBP	4.7	□□□□□ -1.66
VMA21	YGR105W	CDC48	P25694	835 aa	Known RBP	4.69	□□□□□ -1.66
VMA21	YGR105W	YKR078W	P36158	585 aa	Known RBP	4.69	□□□□□ -1.66
VMA21	YGR105W	CCC2	P38995	1004 aa		4.69	□□□□□ -1.66
VMA21	YGR105W	UTP8	P53276	713 aa	Known RBP	4.69	□□□□□ -1.66
VMA21	YGR105W	TPO2	P53283	614 aa		4.69	□□□□□ -1.66
VMA21	YGR105W	WHI4	Q07655	649 aa	Known RBP	4.69	□□□□□ -1.66
VMA21	YGR105W	YPR071W	Q12346	211 aa		4.69	□□□□□ -1.66
VMA21	YGR105W	ARE1	P25628	610 aa		4.68	□□□□□ -1.66
VMA21	YGR105W	RPC82	P32349	654 aa		4.68	□□□□□ -1.66
VMA21	YGR105W	SIT1	P39980	628 aa		4.68	□□□□□ -1.66
VMA21	YGR105W	TIM54	P47045	478 aa		4.68	□□□□□ -1.66
VMA21	YGR105W	MNN10	P50108	393 aa	Known RBP	4.68	□□□□□ -1.66
VMA21	YGR105W	PSP2	P50109	593 aa	Known RBP	4.68	□□□□□ -1.66
VMA21	YGR105W	NOT3	P06102	836 aa	Known RBP	4.67	□□□□□ -1.66
VMA21	YGR105W	TOK1	P40310	691 aa		4.67	□□□□□ -1.66
VMA21	YGR105W	CHA4	P43634	648 aa		4.67	□□□□□ -1.66
VMA21	YGR105W	YKE2	P52553	114 aa		4.67	□□□□□ -1.66
VMA21	YGR105W	ERP6	P53198	216 aa		4.67	□□□□□ -1.66
VMA21	YGR105W	BUL2	Q03758	920 aa	Known RBP	4.67	□□□□□ -1.66
VMA21	YGR105W	OSH2	Q12451	1283 aa		4.67	□□□□□ -1.66
VMA21	YGR105W	HBN1	Q96VH4	193 aa		4.67	□□□□□ -1.66
VMA21	YGR105W	STE11	P23561	717 aa		4.66	□□□□□ -1.66
VMA21	YGR105W	CDC11	P32458	415 aa		4.66	□□□□□ -1.66
VMA21	YGR105W	YBR238C	P38330	731 aa	Known RBP	4.66	□□□□□ -1.66
VMA21	YGR105W	RAI1	P53063	387 aa	Known RBP	4.66	□□□□□ -1.66
VMA21	YGR105W	YGR125W	P53273	1036 aa		4.66	□□□□□ -1.66
VMA21	YGR105W	LCD1	Q04377	747 aa		4.66	□□□□□ -1.66
VMA21	YGR105W	HSP60	P19882	572 aa	Known RBP	4.65	□□□□□ -1.67
VMA21	YGR105W	HUL5	P53119	910 aa		4.65	□□□□□ -1.67
VMA21	YGR105W	KCS1	Q12494	1050 aa		4.65	□□□□□ -1.67
VMA21	YGR105W	CIT1	P00890	479 aa		4.64	□□□□□ -1.67
VMA21	YGR105W	TOP3	P13099	656 aa		4.64	□□□□□ -1.67
VMA21	YGR105W	MSD1	P15179	658 aa	Known RBP	4.64	□□□□□ -1.67
VMA21	YGR105W	HCM1	P25364	564 aa		4.64	□□□□□ -1.67
VMA21	YGR105W	RPD3	P32561	433 aa		4.64	□□□□□ -1.67
VMA21	YGR105W	REC104	P33323	182 aa		4.64	□□□□□ -1.67
VMA21	YGR105W	YHR020W	P38708	688 aa	Known RBP	4.64	□□□□□ -1.67
VMA21	YGR105W	URM1	P40554	99 aa	Predicted RBP	4.64	□□□□□ -1.67
VMA21	YGR105W	CCM1	P48237	864 aa	Predicted RBP	4.64	□□□□□ -1.67
VMA21	YGR105W	PHO23	P50947	330 aa		4.64	□□□□□ -1.67
VMA21	YGR105W	SSL1	Q04673	461 aa	Predicted RBP	4.64	□□□□□ -1.67
VMA21	YGR105W	RPP2A	P05319	106 aa	Known RBP	4.63	□□□□□ -1.67
VMA21	YGR105W	STE13	P33894	931 aa		4.63	□□□□□ -1.67
VMA21	YGR105W	ATG19	P35193	415 aa		4.63	□□□□□ -1.67
VMA21	YGR105W	PET10	P36139	283 aa		4.63	□□□□□ -1.67
VMA21	YGR105W	YJL049W	P47048	450 aa		4.63	□□□□□ -1.67
VMA21	YGR105W	NCS6	P53088	359 aa		4.63	□□□□□ -1.67
VMA21	YGR105W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
VMA21	YGR105W	FLC1	Q08967	793 aa		4.63	□□□□□ -1.67
VMA21	YGR105W	UPC2	Q12151	913 aa		4.63	□□□□□ -1.67
VMA21	YGR105W	NPC2	Q12408	173 aa		4.63	□□□□□ -1.67
VMA21	YGR105W	RFA1	P22336	621 aa	Known RBP	4.62	□□□□□ -1.67
VMA21	YGR105W	NNF1	P47149	201 aa		4.62	□□□□□ -1.67
VMA21	YGR105W	EXG2	P52911	562 aa		4.62	□□□□□ -1.67
VMA21	YGR105W	TUB2	P02557	457 aa	Known RBP	4.61	□□□□□ -1.67
VMA21	YGR105W	PMA1	P05030	918 aa	Known RBP	4.61	□□□□□ -1.67
VMA21	YGR105W	DCG1	P32460	244 aa		4.61	□□□□□ -1.67
VMA21	YGR105W	RSP5	P39940	809 aa	Known RBP	4.61	□□□□□ -1.67
VMA21	YGR105W	CEP3	P40969	608 aa		4.61	□□□□□ -1.67
VMA21	YGR105W	HUL4	P40985	892 aa		4.61	□□□□□ -1.67
VMA21	YGR105W	TAF8	Q03750	510 aa		4.61	□□□□□ -1.67
VMA21	YGR105W	BDF2	Q07442	638 aa		4.61	□□□□□ -1.67
VMA21	YGR105W	YDL124W	Q07551	312 aa	Known RBP	4.61	□□□□□ -1.67
VMA21	YGR105W	NTO1	Q12311	748 aa		4.61	□□□□□ -1.67
VMA21	YGR105W	SED4	P25365	1065 aa		4.6	□□□□□ -1.67
VMA21	YGR105W	STE14	P32584	239 aa		4.6	□□□□□ -1.67
VMA21	YGR105W	TRM2	P33753	639 aa		4.6	□□□□□ -1.67
VMA21	YGR105W	BET3	P36149	193 aa		4.6	□□□□□ -1.67
VMA21	YGR105W	YIL108W	P40483	696 aa	Known RBP	4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 105.2 ms