RNA–Protein interactions for RNA: YGL070C

RPB9, Transcript of RNA polymerase II subunit B12.6, yeastyeast

Gene RPB9, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB9YGL070C MRP8P35719 219 aa3.83□□□□□ -1.8
RPB9YGL070C RIM11P38615 370 aa3.83□□□□□ -1.8
RPB9YGL070C YHR020WP38708 688 aaKnown RBP3.83□□□□□ -1.8
RPB9YGL070C PTC7P38797 343 aa3.83□□□□□ -1.8
RPB9YGL070C GEM1P39722 662 aa3.83□□□□□ -1.8
RPB9YGL070C SNF7P39929 240 aaKnown RBP3.83□□□□□ -1.8
RPB9YGL070C RSM26P47141 266 aa3.83□□□□□ -1.8
RPB9YGL070C NUT1P53114 1132 aa3.83□□□□□ -1.8
RPB9YGL070C MON1P53129 644 aa3.83□□□□□ -1.8
RPB9YGL070C ERP6P53198 216 aa3.83□□□□□ -1.8
RPB9YGL070C MEC3Q02574 474 aa3.83□□□□□ -1.8
RPB9YGL070C MRL1Q06815 381 aa3.83□□□□□ -1.8
RPB9YGL070C BUD21Q08492 214 aaPredicted RBP3.83□□□□□ -1.8
RPB9YGL070C CMR1Q12510 522 aaKnown RBP3.83□□□□□ -1.8
RPB9YGL070C ADR1P07248 1323 aa3.82□□□□□ -1.8
RPB9YGL070C NFS1P25374 497 aa3.82□□□□□ -1.8
RPB9YGL070C AGP1P25376 633 aa3.82□□□□□ -1.8
RPB9YGL070C ARE1P25628 610 aa3.82□□□□□ -1.8
RPB9YGL070C RPL8BP29453 256 aaKnown RBP3.82□□□□□ -1.8
RPB9YGL070C YKL069WP36088 180 aa3.82□□□□□ -1.8
RPB9YGL070C REI1P38344 393 aaPredicted RBP3.82□□□□□ -1.8
RPB9YGL070C PIC2P40035 300 aa3.82□□□□□ -1.8
RPB9YGL070C SHE9Q04172 456 aa3.82□□□□□ -1.8
RPB9YGL070C EAF1Q06337 982 aa3.82□□□□□ -1.8
RPB9YGL070C PMT7Q06644 662 aa3.82□□□□□ -1.8
RPB9YGL070C CFT1Q06632 1357 aaKnown RBP3.81□□□□□ -1.8
RPB9YGL070C CAN1P04817 590 aa3.81□□□□□ -1.8
RPB9YGL070C KAR1P11927 433 aa3.81□□□□□ -1.8
RPB9YGL070C SBA1P28707 216 aaKnown RBP3.81□□□□□ -1.8
RPB9YGL070C SMY2P32909 740 aaKnown RBP3.81□□□□□ -1.8
RPB9YGL070C SHU2P38957 223 aa3.81□□□□□ -1.8
RPB9YGL070C GTS1P40956 396 aa3.81□□□□□ -1.8
RPB9YGL070C XKS1P42826 600 aa3.81□□□□□ -1.8
RPB9YGL070C UTP22P53254 1237 aaPredicted RBP3.81□□□□□ -1.8
RPB9YGL070C YNR029CP53729 429 aaKnown RBP3.81□□□□□ -1.8
RPB9YGL070C VMS1Q04311 632 aaKnown RBP3.81□□□□□ -1.8
RPB9YGL070C GSF2Q04697 403 aaKnown RBP3.81□□□□□ -1.8
RPB9YGL070C ERR1P0CX10 437 aa3.8□□□□□ -1.8
RPB9YGL070C ERR2P0CX11 437 aa3.8□□□□□ -1.8
RPB9YGL070C MSH2P25847 964 aa3.8□□□□□ -1.8
RPB9YGL070C DPB3P27344 201 aa3.8□□□□□ -1.8
RPB9YGL070C UGA4P32837 571 aa3.8□□□□□ -1.8
RPB9YGL070C TOD6P34219 525 aa3.8□□□□□ -1.8
RPB9YGL070C PBY1P38254 753 aa3.8□□□□□ -1.8
RPB9YGL070C PAF1P38351 445 aa3.8□□□□□ -1.8
RPB9YGL070C ETP1P38748 585 aaKnown RBP3.8□□□□□ -1.8
RPB9YGL070C PMC1P38929 1173 aaPredicted RBP3.8□□□□□ -1.8
RPB9YGL070C HLJ1P48353 224 aa3.8□□□□□ -1.8
RPB9YGL070C FOL1P53848 824 aa3.8□□□□□ -1.8
RPB9YGL070C ELA1P53861 379 aaPredicted RBP3.8□□□□□ -1.8
RPB9YGL070C UGO1Q03327 502 aa3.8□□□□□ -1.8
RPB9YGL070C CEF1Q03654 590 aaPredicted RBP3.8□□□□□ -1.8
RPB9YGL070C FMP25Q08023 583 aa3.8□□□□□ -1.8
RPB9YGL070C YRF1-3P0CX14 1859 aa3.79□□□□□ -1.8
RPB9YGL070C YRF1-7P0CX15 1859 aa3.79□□□□□ -1.8
RPB9YGL070C YRF1-6P53819 1859 aa3.79□□□□□ -1.8
RPB9YGL070C SOD2P00447 233 aa3.79□□□□□ -1.8
RPB9YGL070C PRP9P19736 530 aaKnown RBP3.79□□□□□ -1.8
RPB9YGL070C PRP5P21372 849 aaPredicted RBP3.79□□□□□ -1.8
RPB9YGL070C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
RPB9YGL070C LYP1P32487 611 aa3.79□□□□□ -1.8
RPB9YGL070C SEC6P32844 805 aa3.79□□□□□ -1.8
RPB9YGL070C DUR3P33413 735 aa3.79□□□□□ -1.8
RPB9YGL070C VBA5P36172 582 aa3.79□□□□□ -1.8
RPB9YGL070C PEX28P38848 579 aa3.79□□□□□ -1.8
RPB9YGL070C RPN11P43588 306 aaKnown RBP3.79□□□□□ -1.8
RPB9YGL070C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
RPB9YGL070C ENT3P47160 408 aa3.79□□□□□ -1.8
RPB9YGL070C PMT3P47190 753 aa3.79□□□□□ -1.8
RPB9YGL070C ZDS1P50111 915 aaKnown RBP3.79□□□□□ -1.8
RPB9YGL070C YGR045CP53229 120 aa3.79□□□□□ -1.8
RPB9YGL070C UTP8P53276 713 aaKnown RBP3.79□□□□□ -1.8
RPB9YGL070C EEB1Q02891 456 aa3.79□□□□□ -1.8
RPB9YGL070C NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
RPB9YGL070C YDL124WQ07551 312 aaKnown RBP3.79□□□□□ -1.8
RPB9YGL070C NTG2Q08214 380 aa3.79□□□□□ -1.8
RPB9YGL070C RPL8AP17076 256 aaKnown RBP3.78□□□□□ -1.8
RPB9YGL070C PWP2P25635 923 aaKnown RBP3.78□□□□□ -1.8
RPB9YGL070C STE5P32917 917 aa3.78□□□□□ -1.8
RPB9YGL070C PEX6P33760 1030 aa3.78□□□□□ -1.8
RPB9YGL070C PIN4P34217 668 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
RPB9YGL070C NNK1P36003 928 aa3.78□□□□□ -1.8
RPB9YGL070C HSV2P50079 448 aaPredicted RBP3.78□□□□□ -1.8
RPB9YGL070C TPO2P53283 614 aa3.78□□□□□ -1.8
RPB9YGL070C PEX13P80667 386 aa3.78□□□□□ -1.8
RPB9YGL070C YPL277CQ08989 487 aa3.78□□□□□ -1.8
RPB9YGL070C YIL177CP40434 1758 aa3.78□□□□□ -1.8
RPB9YGL070C YJL225CP40889 1758 aa3.78□□□□□ -1.8
RPB9YGL070C TRP2P00899 507 aaKnown RBP3.77□□□□□ -1.81
RPB9YGL070C RPS13P05756 151 aaKnown RBP3.77□□□□□ -1.81
RPB9YGL070C ABD1P32783 436 aaPredicted RBP3.77□□□□□ -1.81
RPB9YGL070C RER2P35196 286 aa3.77□□□□□ -1.81
RPB9YGL070C YKL077WP36081 392 aa3.77□□□□□ -1.81
RPB9YGL070C ABZ1P37254 787 aaPredicted RBP3.77□□□□□ -1.81
RPB9YGL070C ALR2P43553 858 aa3.77□□□□□ -1.81
RPB9YGL070C SAP155P43612 1002 aa3.77□□□□□ -1.81
RPB9YGL070C LYS4P49367 693 aaPredicted RBP3.77□□□□□ -1.81
RPB9YGL070C YGR237CP50089 785 aa3.77□□□□□ -1.81
RPB9YGL070C YGL140CP53120 1219 aa3.77□□□□□ -1.81
RPB9YGL070C SIW14P53965 281 aa3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 37.1 ms