RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C BRE2P43132 505 aa7.05□□□□□ -1.28
YPT1YFL038C VPS4P52917 437 aa7.05□□□□□ -1.28
YPT1YFL038C YGR021WP53212 290 aa7.05□□□□□ -1.28
YPT1YFL038C TOF1P53840 1238 aa7.05□□□□□ -1.28
YPT1YFL038C GIR2Q03768 265 aaPredicted RBP7.05□□□□□ -1.28
YPT1YFL038C YMR114CQ04471 368 aaKnown RBP7.05□□□□□ -1.28
YPT1YFL038C RUD3Q12234 484 aaKnown RBP7.05□□□□□ -1.28
YPT1YFL038C TUB2P02557 457 aaKnown RBP7.04□□□□□ -1.28
YPT1YFL038C ERG11P10614 530 aa7.04□□□□□ -1.28
YPT1YFL038C GFA1P14742 717 aaKnown RBP7.04□□□□□ -1.28
YPT1YFL038C MSM1P22438 575 aa7.04□□□□□ -1.28
YPT1YFL038C CLB5P30283 435 aa7.04□□□□□ -1.28
YPT1YFL038C ECM32P32644 1121 aaKnown RBP7.04□□□□□ -1.28
YPT1YFL038C LAS1P36146 502 aaPredicted RBP7.04□□□□□ -1.28
YPT1YFL038C PTC4P38089 393 aa7.04□□□□□ -1.28
YPT1YFL038C NDT80P38830 627 aa7.04□□□□□ -1.28
YPT1YFL038C KEL1P38853 1164 aaKnown RBP7.04□□□□□ -1.28
YPT1YFL038C SGM1P47166 707 aa7.04□□□□□ -1.28
YPT1YFL038C COS5P47187 383 aa7.04□□□□□ -1.28
YPT1YFL038C KAP114P53067 1004 aa7.04□□□□□ -1.28
YPT1YFL038C CNM67P53865 581 aaKnown RBP7.04□□□□□ -1.28
YPT1YFL038C SEN54Q02825 467 aaPredicted RBP7.04□□□□□ -1.28
YPT1YFL038C SYH1Q02875 849 aaKnown RBP7.04□□□□□ -1.28
YPT1YFL038C YLR297WQ05899 129 aa7.04□□□□□ -1.28
YPT1YFL038C STE23Q06010 1027 aa7.04□□□□□ -1.28
YPT1YFL038C SFH1Q06168 426 aa7.04□□□□□ -1.28
YPT1YFL038C CUR1Q06469 252 aa7.04□□□□□ -1.28
YPT1YFL038C SRD1P09007 221 aa7.03□□□□□ -1.28
YPT1YFL038C PRP22P24384 1145 aaKnown RBP7.03□□□□□ -1.28
YPT1YFL038C PGM2P37012 569 aaKnown RBP7.03□□□□□ -1.28
YPT1YFL038C OLA1P38219 394 aaKnown RBP7.03□□□□□ -1.28
YPT1YFL038C GPD2P41911 440 aaKnown RBP7.03□□□□□ -1.28
YPT1YFL038C YJR079WP47126 109 aa7.03□□□□□ -1.28
YPT1YFL038C ESBP6P53918 673 aa7.03□□□□□ -1.28
YPT1YFL038C EEB1Q02891 456 aa7.03□□□□□ -1.28
YPT1YFL038C URH1Q04179 340 aa7.03□□□□□ -1.28
YPT1YFL038C CSR1Q06705 408 aaKnown RBP7.03□□□□□ -1.28
YPT1YFL038C WHI4Q07655 649 aaKnown RBP7.03□□□□□ -1.28
YPT1YFL038C APL5Q08951 932 aaKnown RBP7.03□□□□□ -1.28
YPT1YFL038C YOR223WQ12015 292 aa7.03□□□□□ -1.28
YPT1YFL038C RIO1Q12196 484 aaKnown RBP7.03□□□□□ -1.28
YPT1YFL038C YOL087CQ99247 1116 aa7.03□□□□□ -1.28
YPT1YFL038C TRP2P00899 507 aaKnown RBP7.02□□□□□ -1.29
YPT1YFL038C SCP160P06105 1222 aaKnown RBP RIP-Chip data7.02□□□□□ -1.29not detected
YPT1YFL038C RAD1P06777 1100 aa7.02□□□□□ -1.29
YPT1YFL038C CLN3P13365 580 aa7.02□□□□□ -1.29
YPT1YFL038C VHR2P40041 505 aa7.02□□□□□ -1.29
YPT1YFL038C LIF1P53150 421 aa7.02□□□□□ -1.29
YPT1YFL038C DIP5P53388 608 aa7.02□□□□□ -1.29
YPT1YFL038C ALD6P54115 500 aaKnown RBP7.02□□□□□ -1.29
YPT1YFL038C YMR102CQ03177 834 aa7.02□□□□□ -1.29
YPT1YFL038C UTP14Q04500 899 aaKnown RBP7.02□□□□□ -1.29
YPT1YFL038C PHM6Q05637 104 aa7.02□□□□□ -1.29
YPT1YFL038C ECI1Q05871 280 aa7.02□□□□□ -1.29
YPT1YFL038C YLR326WQ06170 240 aaKnown RBP7.02□□□□□ -1.29
YPT1YFL038C RLP24Q07915 199 aaKnown RBP7.02□□□□□ -1.29
YPT1YFL038C PHR1P05066 565 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29not detected
YPT1YFL038C SWI6P09959 803 aa7.01□□□□□ -1.29
YPT1YFL038C PHO8P11491 566 aa7.01□□□□□ -1.29
YPT1YFL038C SUP45P12385 437 aaKnown RBP7.01□□□□□ -1.29
YPT1YFL038C KRS1P15180 591 aaKnown RBP7.01□□□□□ -1.29
YPT1YFL038C ESS1P22696 170 aa7.01□□□□□ -1.29
YPT1YFL038C SUV3P32580 737 aa7.01□□□□□ -1.29
YPT1YFL038C UBC6P33296 250 aaPredicted RBP7.01□□□□□ -1.29
YPT1YFL038C YEL1P34225 687 aa7.01□□□□□ -1.29
YPT1YFL038C SLD2P34252 453 aa7.01□□□□□ -1.29
YPT1YFL038C BLI1P35727 113 aa7.01□□□□□ -1.29
YPT1YFL038C STV1P37296 890 aa7.01□□□□□ -1.29
YPT1YFL038C UBP13P38187 747 aa7.01□□□□□ -1.29
YPT1YFL038C PHO88P38264 188 aaPredicted RBP7.01□□□□□ -1.29
YPT1YFL038C SPP381P38282 291 aaPredicted RBP7.01□□□□□ -1.29
YPT1YFL038C GDT1P38301 280 aaPredicted RBP7.01□□□□□ -1.29
YPT1YFL038C RCK2P38623 610 aa7.01□□□□□ -1.29
YPT1YFL038C SAP1P39955 897 aaKnown RBP7.01□□□□□ -1.29
YPT1YFL038C NIT1P40447 199 aa7.01□□□□□ -1.29
YPT1YFL038C ULP2P40537 1034 aaPredicted RBP7.01□□□□□ -1.29
YPT1YFL038C LCB2P40970 561 aa7.01□□□□□ -1.29
YPT1YFL038C RPC17P47076 161 aa7.01□□□□□ -1.29
YPT1YFL038C DIG1Q03063 452 aaKnown RBP7.01□□□□□ -1.29
YPT1YFL038C SUB2Q07478 446 aaKnown RBP7.01□□□□□ -1.29
YPT1YFL038C ATG20Q07528 640 aa7.01□□□□□ -1.29
YPT1YFL038C ZRT2Q12436 422 aa7.01□□□□□ -1.29
YPT1YFL038C PGK1P00560 416 aaKnown RBP7□□□□□ -1.29
YPT1YFL038C RAD18P10862 487 aa7□□□□□ -1.29
YPT1YFL038C GLC3P32775 704 aa7□□□□□ -1.29
YPT1YFL038C UBP11P36026 717 aa7□□□□□ -1.29
YPT1YFL038C MCD4P36051 919 aa7□□□□□ -1.29
YPT1YFL038C YKL023WP36103 277 aaKnown RBP7□□□□□ -1.29
YPT1YFL038C RPN3P40016 523 aaKnown RBP7□□□□□ -1.29
YPT1YFL038C FIS1P40515 155 aa7□□□□□ -1.29
YPT1YFL038C YJR039WP47107 1121 aa7□□□□□ -1.29
YPT1YFL038C ARK1P53974 638 aa7□□□□□ -1.29
YPT1YFL038C TRM44Q02648 567 aaKnown RBP7□□□□□ -1.29
YPT1YFL038C YMR018WQ04364 514 aa7□□□□□ -1.29
YPT1YFL038C GUD1Q07729 489 aa7□□□□□ -1.29
YPT1YFL038C FKS1P38631 1876 aaKnown RBP6.99□□□□□ -1.29
YPT1YFL038C SNF1P06782 633 aaKnown RBP6.99□□□□□ -1.29
YPT1YFL038C TCP1P12612 559 aaKnown RBP6.99□□□□□ -1.29
YPT1YFL038C CHS2P14180 963 aa6.99□□□□□ -1.29
YPT1YFL038C BCH2P36122 765 aa6.99□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms