RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C PRI2P20457 528 aa3.93□□□□□ -1.78
SMB1YER029C GEM1P39722 662 aa3.93□□□□□ -1.78
SMB1YER029C VAC8P39968 578 aa3.93□□□□□ -1.78
SMB1YER029C MTC3P53077 123 aa3.93□□□□□ -1.78
SMB1YER029C SPP382Q06411 708 aaPredicted RBP3.93□□□□□ -1.78
SMB1YER029C FAL1Q12099 399 aaKnown RBP3.93□□□□□ -1.78
SMB1YER029C ZRG8P40021 1076 aa3.92□□□□□ -1.78
SMB1YER029C CHA4P43634 648 aa3.92□□□□□ -1.78
SMB1YER029C HFM1P51979 1187 aa3.92□□□□□ -1.78
SMB1YER029C SHE9Q04172 456 aa3.92□□□□□ -1.78
SMB1YER029C HRQ1Q05549 1077 aa3.92□□□□□ -1.78
SMB1YER029C SSF2Q12153 453 aaPredicted RBP3.92□□□□□ -1.78
SMB1YER029C KCS1Q12494 1050 aa3.92□□□□□ -1.78
SMB1YER029C PIN4P34217 668 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
SMB1YER029C VBA5P36172 582 aa3.91□□□□□ -1.78
SMB1YER029C MBP1P39678 833 aa3.91□□□□□ -1.78
SMB1YER029C SPF1P39986 1215 aaKnown RBP3.91□□□□□ -1.78
SMB1YER029C NPP2P39997 493 aa3.91□□□□□ -1.78
SMB1YER029C RRT14P40470 206 aa3.91□□□□□ -1.78
SMB1YER029C CWC24P53769 259 aa3.91□□□□□ -1.78
SMB1YER029C TMN2Q04562 672 aa3.91□□□□□ -1.78
SMB1YER029C MCH5Q08777 521 aa3.91□□□□□ -1.78
SMB1YER029C ENA1P13587 1091 aa3.9□□□□□ -1.79
SMB1YER029C EFT1P32324 842 aaKnown RBP3.9□□□□□ -1.79
SMB1YER029C STE5P32917 917 aa3.9□□□□□ -1.79
SMB1YER029C GUS1P46655 708 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
SMB1YER029C ENA2Q01896 1091 aa3.9□□□□□ -1.79
SMB1YER029C YLR040CQ07988 224 aa3.9□□□□□ -1.79
SMB1YER029C XYL2Q07993 356 aa3.9□□□□□ -1.79
SMB1YER029C YOL073CQ08232 322 aa3.9□□□□□ -1.79
SMB1YER029C ENA5Q12691 1091 aa3.9□□□□□ -1.79
SMB1YER029C CDC12P32468 407 aaKnown RBP3.89□□□□□ -1.79
SMB1YER029C SUL1P38359 859 aa3.89□□□□□ -1.79
SMB1YER029C GIC1P38785 314 aa3.89□□□□□ -1.79
SMB1YER029C MDM38Q08179 573 aa3.89□□□□□ -1.79
SMB1YER029C ENB1Q08299 606 aa3.89□□□□□ -1.79
SMB1YER029C YLL058WQ12198 575 aa3.89□□□□□ -1.79
SMB1YER029C THS1P04801 734 aaKnown RBP3.88□□□□□ -1.79
SMB1YER029C KRI1P42846 591 aaKnown RBP3.88□□□□□ -1.79
SMB1YER029C PFD1P46988 109 aa3.88□□□□□ -1.79
SMB1YER029C OMS1Q06668 471 aa3.88□□□□□ -1.79
SMB1YER029C IRC10Q08118 586 aa3.88□□□□□ -1.79
SMB1YER029C AFR1P33304 620 aa3.87□□□□□ -1.79
SMB1YER029C MRP8P35719 219 aa3.87□□□□□ -1.79
SMB1YER029C YAP1801P38856 637 aa3.87□□□□□ -1.79
SMB1YER029C STB4P50104 949 aa3.87□□□□□ -1.79
SMB1YER029C TDA5Q06417 326 aaKnown RBP3.87□□□□□ -1.79
SMB1YER029C LAS17Q12446 633 aa3.87□□□□□ -1.79
SMB1YER029C HBS1P32769 611 aaKnown RBP3.86□□□□□ -1.79
SMB1YER029C PBY1P38254 753 aa3.86□□□□□ -1.79
SMB1YER029C SNF7P39929 240 aaKnown RBP3.86□□□□□ -1.79
SMB1YER029C NOP7P53261 605 aaKnown RBP3.86□□□□□ -1.79
SMB1YER029C SRT1Q03175 343 aa3.86□□□□□ -1.79
SMB1YER029C NPC2Q12408 173 aa3.86□□□□□ -1.79
SMB1YER029C FUN30P31380 1131 aa3.85□□□□□ -1.79
SMB1YER029C BUL1P48524 976 aa3.85□□□□□ -1.79
SMB1YER029C TIM44Q01852 431 aa3.85□□□□□ -1.79
SMB1YER029C FMP25Q08023 583 aa3.85□□□□□ -1.79
SMB1YER029C ACF2Q12168 779 aa3.85□□□□□ -1.79
SMB1YER029C NPP1P25353 742 aa3.84□□□□□ -1.79
SMB1YER029C GRX1P25373 110 aaKnown RBP3.84□□□□□ -1.79
SMB1YER029C KTR4P38131 464 aa3.84□□□□□ -1.79
SMB1YER029C YBR184WP38299 523 aa3.84□□□□□ -1.79
SMB1YER029C YBR238CP38330 731 aaKnown RBP3.84□□□□□ -1.79
SMB1YER029C TSL1P38427 1098 aaKnown RBP3.84□□□□□ -1.79
SMB1YER029C SAH1P39954 449 aaKnown RBP3.84□□□□□ -1.79
SMB1YER029C YER158CP40095 573 aa3.84□□□□□ -1.79
SMB1YER029C IRR1P40541 1150 aa3.84□□□□□ -1.79
SMB1YER029C BUL2Q03758 920 aaKnown RBP3.84□□□□□ -1.79
SMB1YER029C DUS3Q06053 668 aaKnown RBP3.84□□□□□ -1.79
SMB1YER029C CDA1Q06702 301 aa3.84□□□□□ -1.79
SMB1YER029C ECM21P38167 1117 aaKnown RBP3.83□□□□□ -1.8
SMB1YER029C SIT1P39980 628 aa3.83□□□□□ -1.8
SMB1YER029C GYP7P48365 746 aa3.83□□□□□ -1.8
SMB1YER029C YKE2P52553 114 aa3.83□□□□□ -1.8
SMB1YER029C YGR012WP53206 393 aa3.83□□□□□ -1.8
SMB1YER029C SFB2P53953 876 aa3.83□□□□□ -1.8
SMB1YER029C YMR206WQ03695 313 aa3.83□□□□□ -1.8
SMB1YER029C NDJ1Q12366 352 aa3.83□□□□□ -1.8
SMB1YER029C SPE1P08432 466 aa3.82□□□□□ -1.8
SMB1YER029C ERT1P38140 529 aa3.82□□□□□ -1.8
SMB1YER029C SRP1Q02821 542 aaKnown RBP3.82□□□□□ -1.8
SMB1YER029C NAN1Q02931 896 aaKnown RBP3.82□□□□□ -1.8
SMB1YER029C YDR306CQ06640 478 aa3.82□□□□□ -1.8
SMB1YER029C RAD4P14736 754 aa3.81□□□□□ -1.8
SMB1YER029C ERG4P25340 473 aa3.81□□□□□ -1.8
SMB1YER029C KAR4P25583 335 aa3.81□□□□□ -1.8
SMB1YER029C RPL8BP29453 256 aaKnown RBP3.81□□□□□ -1.8
SMB1YER029C MTH1P35198 433 aa3.81□□□□□ -1.8
SMB1YER029C YKR078WP36158 585 aaKnown RBP3.81□□□□□ -1.8
SMB1YER029C NCS6P53088 359 aa3.81□□□□□ -1.8
SMB1YER029C UTP8P53276 713 aaKnown RBP3.81□□□□□ -1.8
SMB1YER029C WRS1Q12109 432 aaKnown RBP3.81□□□□□ -1.8
SMB1YER029C OSW2Q12202 724 aa3.81□□□□□ -1.8
SMB1YER029C SRP101P32916 621 aa3.8□□□□□ -1.8
SMB1YER029C YHR020WP38708 688 aaKnown RBP3.8□□□□□ -1.8
SMB1YER029C CCC2P38995 1004 aa3.8□□□□□ -1.8
SMB1YER029C PSP2P50109 593 aaKnown RBP3.8□□□□□ -1.8
SMB1YER029C GUP2Q08929 609 aa3.8□□□□□ -1.8
SMB1YER029C PRP9P19736 530 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 89.3 ms