RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TCA17, Length 459 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCA17YEL048C MPT5P39016 859 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
TCA17YEL048C GYP7P48365 746 aa6.42□□□□□ -1.38
TCA17YEL048C VPS62P53285 467 aa6.42□□□□□ -1.38
TCA17YEL048C YAP6Q03935 383 aa6.42□□□□□ -1.38
TCA17YEL048C HMI1Q12039 706 aa6.42□□□□□ -1.38
TCA17YEL048C CDC6P09119 513 aa6.41□□□□□ -1.38
TCA17YEL048C YKR078WP36158 585 aaKnown RBP6.41□□□□□ -1.38
TCA17YEL048C YRO2P38079 344 aa6.41□□□□□ -1.38
TCA17YEL048C CCC2P38995 1004 aa6.41□□□□□ -1.38
TCA17YEL048C YER158CP40095 573 aa6.41□□□□□ -1.38
TCA17YEL048C SFB2P53953 876 aa6.41□□□□□ -1.38
TCA17YEL048C NOP12Q08208 459 aaKnown RBP6.41□□□□□ -1.38
TCA17YEL048C CDC11P32458 415 aa6.4□□□□□ -1.38
TCA17YEL048C ALR2P43553 858 aa6.4□□□□□ -1.38
TCA17YEL048C MET12P46151 657 aa6.4□□□□□ -1.38
TCA17YEL048C CDA1Q06702 301 aa6.4□□□□□ -1.38
TCA17YEL048C FMP25Q08023 583 aa6.4□□□□□ -1.38
TCA17YEL048C OSH2Q12451 1283 aa6.4□□□□□ -1.38
TCA17YEL048C CDC48P25694 835 aaKnown RBP6.39□□□□□ -1.39
TCA17YEL048C NPP2P39997 493 aa6.39□□□□□ -1.39
TCA17YEL048C PFD1P46988 109 aa6.39□□□□□ -1.39
TCA17YEL048C ERP6P53198 216 aa6.39□□□□□ -1.39
TCA17YEL048C YLR224WQ05947 369 aa6.39□□□□□ -1.39
TCA17YEL048C TMA10Q06177 86 aa6.39□□□□□ -1.39
TCA17YEL048C EAF1Q06337 982 aa6.39□□□□□ -1.39
TCA17YEL048C ADY3Q07732 790 aa6.39□□□□□ -1.39
TCA17YEL048C HIS5P07172 385 aa6.38□□□□□ -1.39
TCA17YEL048C RAD4P14736 754 aa6.38□□□□□ -1.39
TCA17YEL048C SIT1P39980 628 aa6.38□□□□□ -1.39
TCA17YEL048C YJL049WP47048 450 aa6.38□□□□□ -1.39
TCA17YEL048C SPE1P08432 466 aa6.37□□□□□ -1.39
TCA17YEL048C STE11P23561 717 aa6.37□□□□□ -1.39
TCA17YEL048C ARE1P25628 610 aa6.37□□□□□ -1.39
TCA17YEL048C CTS1P29029 562 aa6.37□□□□□ -1.39
TCA17YEL048C RPL8BP29453 256 aaKnown RBP6.37□□□□□ -1.39
TCA17YEL048C ATG19P35193 415 aa6.37□□□□□ -1.39
TCA17YEL048C SHM2P37291 469 aaKnown RBP6.37□□□□□ -1.39
TCA17YEL048C TSL1P38427 1098 aaKnown RBP6.37□□□□□ -1.39
TCA17YEL048C MNN10P50108 393 aaKnown RBP6.37□□□□□ -1.39
TCA17YEL048C MCM6P53091 1017 aaKnown RBP6.37□□□□□ -1.39
TCA17YEL048C UTP8P53276 713 aaKnown RBP6.37□□□□□ -1.39
TCA17YEL048C HBS1P32769 611 aaKnown RBP6.36□□□□□ -1.39
TCA17YEL048C LST4P34239 828 aa6.36□□□□□ -1.39
TCA17YEL048C TIM54P47045 478 aa6.36□□□□□ -1.39
TCA17YEL048C CCM1P48237 864 aaPredicted RBP6.36□□□□□ -1.39
TCA17YEL048C LCD1Q04377 747 aa6.36□□□□□ -1.39
TCA17YEL048C UBX5Q06682 500 aa6.36□□□□□ -1.39
TCA17YEL048C HSP60P19882 572 aaKnown RBP6.35□□□□□ -1.39
TCA17YEL048C NPP1P25353 742 aa6.35□□□□□ -1.39
TCA17YEL048C PLB1P39105 664 aa6.35□□□□□ -1.39
TCA17YEL048C RAI1P53063 387 aaKnown RBP6.35□□□□□ -1.39
TCA17YEL048C VPS30Q02948 557 aa6.35□□□□□ -1.39
TCA17YEL048C YGR125WP53273 1036 aa6.34□□□□□ -1.39
TCA17YEL048C AFR1P33304 620 aa6.33□□□□□ -1.4
TCA17YEL048C YBR284WP38150 797 aa6.33□□□□□ -1.4
TCA17YEL048C CHA4P43634 648 aa6.33□□□□□ -1.4
TCA17YEL048C YPR071WQ12346 211 aa6.33□□□□□ -1.4
TCA17YEL048C NOT3P06102 836 aaKnown RBP6.32□□□□□ -1.4
TCA17YEL048C RFA1P22336 621 aaKnown RBP6.32□□□□□ -1.4
TCA17YEL048C REC104P33323 182 aa6.32□□□□□ -1.4
TCA17YEL048C YBR238CP38330 731 aaKnown RBP6.32□□□□□ -1.4
TCA17YEL048C IOC3P43596 787 aa6.32□□□□□ -1.4
TCA17YEL048C NNF1P47149 201 aa6.32□□□□□ -1.4
TCA17YEL048C YKE2P52553 114 aa6.32□□□□□ -1.4
TCA17YEL048C TOK1P40310 691 aa6.31□□□□□ -1.4
TCA17YEL048C HUL4P40985 892 aa6.31□□□□□ -1.4
TCA17YEL048C HBN1Q96VH4 193 aa6.31□□□□□ -1.4
TCA17YEL048C CIT1P00890 479 aa6.3□□□□□ -1.4
TCA17YEL048C HCM1P25364 564 aa6.3□□□□□ -1.4
TCA17YEL048C YDL124WQ07551 312 aaKnown RBP6.3□□□□□ -1.4
TCA17YEL048C ERT1P38140 529 aa6.29□□□□□ -1.4
TCA17YEL048C URM1P40554 99 aaPredicted RBP6.29□□□□□ -1.4
TCA17YEL048C WHI4Q07655 649 aaKnown RBP6.29□□□□□ -1.4
TCA17YEL048C FLC1Q08967 793 aa6.29□□□□□ -1.4
TCA17YEL048C TUB2P02557 457 aaKnown RBP6.28□□□□□ -1.4
TCA17YEL048C STE13P33894 931 aa6.28□□□□□ -1.4
TCA17YEL048C PET10P36139 283 aa6.28□□□□□ -1.4
TCA17YEL048C HUL5P53119 910 aa6.28□□□□□ -1.4
TCA17YEL048C BUL2Q03758 920 aaKnown RBP6.28□□□□□ -1.4
TCA17YEL048C GSF2Q04697 403 aaKnown RBP6.28□□□□□ -1.4
TCA17YEL048C URN1Q06525 465 aaKnown RBP6.28□□□□□ -1.4
TCA17YEL048C NPC2Q12408 173 aa6.28□□□□□ -1.4
TCA17YEL048C KCS1Q12494 1050 aa6.28□□□□□ -1.4
TCA17YEL048C MSD1P15179 658 aaKnown RBP6.27□□□□□ -1.41
TCA17YEL048C SED4P25365 1065 aa6.27□□□□□ -1.41
TCA17YEL048C TRM2P33753 639 aa6.27□□□□□ -1.41
TCA17YEL048C NCS6P53088 359 aa6.27□□□□□ -1.41
TCA17YEL048C NPL3Q01560 414 aaKnown RBP RIP-Chip data6.27□□□□□ -1.41not detected
TCA17YEL048C CDC53Q12018 815 aaKnown RBP6.27□□□□□ -1.41
TCA17YEL048C DCG1P32460 244 aa6.26□□□□□ -1.41
TCA17YEL048C CEP3P40969 608 aa6.26□□□□□ -1.41
TCA17YEL048C RPS9AO13516 197 aaKnown RBP6.25□□□□□ -1.41
TCA17YEL048C PMA1P05030 918 aaKnown RBP6.25□□□□□ -1.41
TCA17YEL048C GGA2P38817 585 aaKnown RBP6.25□□□□□ -1.41
TCA17YEL048C NIT3P49954 291 aa6.25□□□□□ -1.41
TCA17YEL048C EXG2P52911 562 aa6.25□□□□□ -1.41
TCA17YEL048C UPC2Q12151 913 aa6.25□□□□□ -1.41
TCA17YEL048C NTO1Q12311 748 aa6.25□□□□□ -1.41
TCA17YEL048C TOM70P07213 617 aaKnown RBP6.24□□□□□ -1.41
TCA17YEL048C MPH2P0CD99 609 aa6.24□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms