RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C MRPL33P20084 86 aa2.96□□□□□ -1.94
SSN2YDR443C SMC1P32908 1225 aa2.96□□□□□ -1.94
SSN2YDR443C AMN1P38285 549 aaPredicted RBP2.96□□□□□ -1.94
SSN2YDR443C SET4P42948 560 aa2.96□□□□□ -1.94
SSN2YDR443C TIM11P81449 96 aaPredicted RBP2.96□□□□□ -1.94
SSN2YDR443C SYF1Q04048 859 aaPredicted RBP2.96□□□□□ -1.94
SSN2YDR443C TDA9Q04545 1251 aa2.96□□□□□ -1.94
SSN2YDR443C YLR257WQ06146 321 aaKnown RBP2.96□□□□□ -1.94
SSN2YDR443C NBA1Q08229 501 aaKnown RBP2.96□□□□□ -1.94
SSN2YDR443C HBN1Q96VH4 193 aa2.96□□□□□ -1.94
SSN2YDR443C CDC9P04819 755 aa2.96□□□□□ -1.94
SSN2YDR443C RGP1P16664 663 aa2.96□□□□□ -1.94
SSN2YDR443C TRS130Q03660 1102 aa2.96□□□□□ -1.94
SSN2YDR443C YMR111CQ04461 462 aaPredicted RBP2.96□□□□□ -1.94
SSN2YDR443C RSC2Q06488 889 aa2.96□□□□□ -1.94
SSN2YDR443C ATG20Q07528 640 aa2.96□□□□□ -1.94
SSN2YDR443C SAC3P46674 1301 aa2.96□□□□□ -1.94
SSN2YDR443C BI4P03879 638 aa2.96□□□□□ -1.94
SSN2YDR443C DED1P06634 604 aaKnown RBP2.96□□□□□ -1.94
SSN2YDR443C CMP2P14747 604 aa2.96□□□□□ -1.94
SSN2YDR443C MTH1P35198 433 aa2.96□□□□□ -1.94
SSN2YDR443C EMW1P42842 904 aaKnown RBP2.96□□□□□ -1.94
SSN2YDR443C KRE33P53914 1056 aaKnown RBP2.96□□□□□ -1.94
SSN2YDR443C NPL3Q01560 414 aaKnown RBP RIP-Chip data2.96□□□□□ -1.94not detected
SSN2YDR443C SDH5Q08230 162 aa2.96□□□□□ -1.94
SSN2YDR443C TMA46Q12000 345 aaKnown RBP2.96□□□□□ -1.94
SSN2YDR443C TAH18Q12181 623 aa2.96□□□□□ -1.94
SSN2YDR443C INO1P11986 533 aa2.95□□□□□ -1.94
SSN2YDR443C DAT1P13483 248 aaKnown RBP2.95□□□□□ -1.94
SSN2YDR443C KAR2P16474 682 aaKnown RBP2.95□□□□□ -1.94
SSN2YDR443C GSY1P23337 708 aa2.95□□□□□ -1.94
SSN2YDR443C IRE1P32361 1115 aa2.95□□□□□ -1.94
SSN2YDR443C NPR3P38742 1146 aa2.95□□□□□ -1.94
SSN2YDR443C OAF1P39720 1047 aaPredicted RBP2.95□□□□□ -1.94
SSN2YDR443C QRI7P43122 407 aa2.95□□□□□ -1.94
SSN2YDR443C RPA14P50106 137 aa2.95□□□□□ -1.94
SSN2YDR443C UBP10P53874 792 aaPredicted RBP2.95□□□□□ -1.94
SSN2YDR443C MOT3P54785 490 aaKnown RBP2.95□□□□□ -1.94
SSN2YDR443C SWA2Q06677 668 aa2.95□□□□□ -1.94
SSN2YDR443C GYP1Q08484 637 aa2.95□□□□□ -1.94
SSN2YDR443C SAM3Q08986 587 aa2.95□□□□□ -1.94
SSN2YDR443C YPR071WQ12346 211 aa2.95□□□□□ -1.94
SSN2YDR443C CMR1Q12510 522 aaKnown RBP2.95□□□□□ -1.94
SSN2YDR443C HSP82P02829 709 aaKnown RBP2.95□□□□□ -1.94
SSN2YDR443C SFL1P20134 766 aa2.95□□□□□ -1.94
SSN2YDR443C RER1P25560 188 aa2.95□□□□□ -1.94
SSN2YDR443C SBA1P28707 216 aaKnown RBP2.95□□□□□ -1.94
SSN2YDR443C SWC3P31376 625 aa2.95□□□□□ -1.94
SSN2YDR443C GCD11P32481 527 aaKnown RBP2.95□□□□□ -1.94
SSN2YDR443C RET2P43621 546 aa2.95□□□□□ -1.94
SSN2YDR443C ELA1P53861 379 aaPredicted RBP2.95□□□□□ -1.94
SSN2YDR443C SQT1P35184 431 aa2.95□□□□□ -1.94
SSN2YDR443C NOP4P37838 685 aaKnown RBP2.95□□□□□ -1.94
SSN2YDR443C PSY4P38193 441 aa2.95□□□□□ -1.94
SSN2YDR443C VHR1P40522 640 aa2.95□□□□□ -1.94
SSN2YDR443C MDE1P47095 244 aa2.95□□□□□ -1.94
SSN2YDR443C AIM14P53109 570 aa2.95□□□□□ -1.94
SSN2YDR443C NCS2P53923 493 aaPredicted RBP2.95□□□□□ -1.94
SSN2YDR443C PEX13P80667 386 aa2.95□□□□□ -1.94
SSN2YDR443C SEC5P89102 971 aa2.95□□□□□ -1.94
SSN2YDR443C SHE9Q04172 456 aa2.95□□□□□ -1.94
SSN2YDR443C YPL191CQ08930 360 aa2.95□□□□□ -1.94
SSN2YDR443C RMP1Q12530 201 aa2.95□□□□□ -1.94
SSN2YDR443C SCP160P06105 1222 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94not detected
SSN2YDR443C RPC40P07703 335 aaKnown RBP2.94□□□□□ -1.94
SSN2YDR443C MSS18P08593 268 aa2.94□□□□□ -1.94
SSN2YDR443C MRP7P12687 371 aa2.94□□□□□ -1.94
SSN2YDR443C MLS1P30952 554 aa2.94□□□□□ -1.94
SSN2YDR443C LYP1P32487 611 aa2.94□□□□□ -1.94
SSN2YDR443C CNS1P33313 385 aa2.94□□□□□ -1.94
SSN2YDR443C RER2P35196 286 aa2.94□□□□□ -1.94
SSN2YDR443C BYE1P36106 594 aa2.94□□□□□ -1.94
SSN2YDR443C ECM2P38241 364 aaKnown RBP2.94□□□□□ -1.94
SSN2YDR443C APM2P38700 605 aa2.94□□□□□ -1.94
SSN2YDR443C MGS1P40151 587 aa2.94□□□□□ -1.94
SSN2YDR443C YAP5P40574 245 aa2.94□□□□□ -1.94
SSN2YDR443C NIT2P47016 307 aa2.94□□□□□ -1.94
SSN2YDR443C BNI5P53890 448 aaKnown RBP2.94□□□□□ -1.94
SSN2YDR443C ELP4Q02884 456 aaKnown RBP2.94□□□□□ -1.94
SSN2YDR443C BLS1Q06071 122 aa2.94□□□□□ -1.94
SSN2YDR443C MDM38Q08179 573 aa2.94□□□□□ -1.94
SSN2YDR443C TIF6Q12522 245 aaKnown RBP2.94□□□□□ -1.94
SSN2YDR443C YMR084WA2P2R3 262 aa2.94□□□□□ -1.94
SSN2YDR443C FLP1P03870 423 aa2.94□□□□□ -1.94
SSN2YDR443C PRP9P19736 530 aaKnown RBP2.94□□□□□ -1.94
SSN2YDR443C VMA3P25515 160 aa2.94□□□□□ -1.94
SSN2YDR443C NAM7P30771 971 aaKnown RBP2.94□□□□□ -1.94
SSN2YDR443C JEM1P40358 645 aa2.94□□□□□ -1.94
SSN2YDR443C RNR4P49723 345 aaKnown RBP2.94□□□□□ -1.94
SSN2YDR443C ARA2Q04212 335 aa2.94□□□□□ -1.94
SSN2YDR443C LCB5Q06147 687 aaKnown RBP2.94□□□□□ -1.94
SSN2YDR443C GUD1Q07729 489 aa2.94□□□□□ -1.94
SSN2YDR443C APC5Q08683 685 aa2.94□□□□□ -1.94
SSN2YDR443C SMF3Q12078 473 aaPredicted RBP2.94□□□□□ -1.94
SSN2YDR443C YOL114CQ12322 202 aa2.94□□□□□ -1.94
SSN2YDR443C MDM12Q92328 271 aa2.94□□□□□ -1.94
SSN2YDR443C HTA1P04911 132 aaKnown RBP2.94□□□□□ -1.94
SSN2YDR443C HTA2P04912 132 aa2.94□□□□□ -1.94
SSN2YDR443C RAD16P31244 790 aa2.94□□□□□ -1.94
SSN2YDR443C DBF4P32325 704 aa2.94□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 101.9 ms