RNA–Protein interactions for RNA: YDR422C

SIP1, Transcript of Alternate beta-subunit of the Snf1p kinase complex, yeast

Gene SIP1, Length 2,448 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP1	YDR422C	GEM1	P39722	662 aa		4.62	□□□□□ -1.67
SIP1	YDR422C	VTC2	P43585	828 aa		4.62	□□□□□ -1.67
SIP1	YDR422C	ALG2	P43636	503 aa		4.62	□□□□□ -1.67
SIP1	YDR422C	ENT3	P47160	408 aa		4.62	□□□□□ -1.67
SIP1	YDR422C	SXM1	Q04175	944 aa	Known RBP	4.62	□□□□□ -1.67
SIP1	YDR422C	SPN1	Q06505	410 aa	Predicted RBP	4.62	□□□□□ -1.67
SIP1	YDR422C	RRP9	Q06506	573 aa	Known RBP	4.62	□□□□□ -1.67
SIP1	YDR422C	YER152C	P10356	443 aa		4.61	□□□□□ -1.67
SIP1	YDR422C	SEC18	P18759	758 aa	Known RBP	4.61	□□□□□ -1.67
SIP1	YDR422C	DBP5	P20449	482 aa	Known RBP	4.61	□□□□□ -1.67
SIP1	YDR422C	PET309	P32522	965 aa	Predicted RBP	4.61	□□□□□ -1.67
SIP1	YDR422C	YEL1	P34225	687 aa		4.61	□□□□□ -1.67
SIP1	YDR422C	RMD8	P43620	662 aa		4.61	□□□□□ -1.67
SIP1	YDR422C	MNN11	P46985	422 aa	Known RBP	4.61	□□□□□ -1.67
SIP1	YDR422C	YGR283C	P53336	341 aa	Predicted RBP	4.61	□□□□□ -1.67
SIP1	YDR422C	ARE2	P53629	642 aa	Known RBP	4.61	□□□□□ -1.67
SIP1	YDR422C	YNL035C	P53962	389 aa	Known RBP	4.61	□□□□□ -1.67
SIP1	YDR422C	RSC3	Q06639	885 aa		4.61	□□□□□ -1.67
SIP1	YDR422C	PMT7	Q06644	662 aa		4.61	□□□□□ -1.67
SIP1	YDR422C	GLO4	Q12320	285 aa		4.61	□□□□□ -1.67
SIP1	YDR422C	DPH6	Q12429	685 aa		4.61	□□□□□ -1.67
SIP1	YDR422C	NCP1	P16603	691 aa	Known RBP	4.61	□□□□□ -1.67
SIP1	YDR422C	SYP1	P25623	870 aa	Known RBP	4.61	□□□□□ -1.67
SIP1	YDR422C	CCR4	P31384	837 aa	Known RBP	4.61	□□□□□ -1.67
SIP1	YDR422C	ANP1	P32629	500 aa		4.61	□□□□□ -1.67
SIP1	YDR422C	SCT1	P32784	759 aa		4.61	□□□□□ -1.67
SIP1	YDR422C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
SIP1	YDR422C	YKL107W	P34251	309 aa		4.61	□□□□□ -1.67
SIP1	YDR422C	NPP2	P39997	493 aa		4.61	□□□□□ -1.67
SIP1	YDR422C	LSM5	P40089	93 aa	Known RBP	4.61	□□□□□ -1.67
SIP1	YDR422C	NCE103	P53615	221 aa		4.61	□□□□□ -1.67
SIP1	YDR422C	CAF120	P53836	1060 aa		4.61	□□□□□ -1.67
SIP1	YDR422C	YNL058C	P53947	316 aa		4.61	□□□□□ -1.67
SIP1	YDR422C	PKH1	Q03407	766 aa		4.61	□□□□□ -1.67
SIP1	YDR422C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
SIP1	YDR422C	MSM1	P22438	575 aa		4.6	□□□□□ -1.67
SIP1	YDR422C	AXL2	P38928	823 aa		4.6	□□□□□ -1.67
SIP1	YDR422C	FIR1	P40020	876 aa		4.6	□□□□□ -1.67
SIP1	YDR422C	ULI1	P43604	169 aa		4.6	□□□□□ -1.67
SIP1	YDR422C	CPR6	P53691	371 aa	Known RBP	4.6	□□□□□ -1.67
SIP1	YDR422C	TDA9	Q04545	1251 aa		4.6	□□□□□ -1.67
SIP1	YDR422C	RSC58	Q07979	502 aa		4.6	□□□□□ -1.67
SIP1	YDR422C	YPL191C	Q08930	360 aa		4.6	□□□□□ -1.67
SIP1	YDR422C	RVB2	Q12464	471 aa	Known RBP	4.6	□□□□□ -1.67
SIP1	YDR422C	MRP10	O75012	95 aa		4.6	□□□□□ -1.67
SIP1	YDR422C	TOK1	P40310	691 aa		4.6	□□□□□ -1.67
SIP1	YDR422C	LTP1	P40347	161 aa		4.6	□□□□□ -1.67
SIP1	YDR422C	CNM67	P53865	581 aa	Known RBP	4.6	□□□□□ -1.67
SIP1	YDR422C	SPO71	Q03868	1245 aa		4.6	□□□□□ -1.67
SIP1	YDR422C	UTP5	Q04177	643 aa	Known RBP	4.6	□□□□□ -1.67
SIP1	YDR422C	HLR1	Q04429	423 aa		4.6	□□□□□ -1.67
SIP1	YDR422C	HSP82	P02829	709 aa	Known RBP	4.59	□□□□□ -1.67
SIP1	YDR422C	COX11	P19516	300 aa	Known RBP	4.59	□□□□□ -1.67
SIP1	YDR422C	POL4	P25615	582 aa		4.59	□□□□□ -1.67
SIP1	YDR422C	VMA8	P32610	256 aa	Known RBP	4.59	□□□□□ -1.67
SIP1	YDR422C	YKL133C	P36066	463 aa		4.59	□□□□□ -1.67
SIP1	YDR422C	VRP1	P37370	817 aa		4.59	□□□□□ -1.67
SIP1	YDR422C	SBE2	P42223	864 aa	Known RBP	4.59	□□□□□ -1.67
SIP1	YDR422C	IRC6	P43615	237 aa		4.59	□□□□□ -1.67
SIP1	YDR422C	PUS4	P48567	403 aa	Known RBP	4.59	□□□□□ -1.67
SIP1	YDR422C	HOT1	Q03213	719 aa		4.59	□□□□□ -1.67
SIP1	YDR422C	PGC1	Q08959	321 aa		4.59	□□□□□ -1.67
SIP1	YDR422C	TRM8	Q12009	286 aa		4.59	□□□□□ -1.67
SIP1	YDR422C	CYB2	P00175	591 aa		4.58	□□□□□ -1.68
SIP1	YDR422C	DED1	P06634	604 aa	Known RBP	4.58	□□□□□ -1.68
SIP1	YDR422C	SNF1	P06782	633 aa	Known RBP	4.58	□□□□□ -1.68
SIP1	YDR422C	LEU1	P07264	779 aa	Known RBP	4.58	□□□□□ -1.68
SIP1	YDR422C	PDC6	P26263	563 aa	Known RBP	4.58	□□□□□ -1.68
SIP1	YDR422C	RAD16	P31244	790 aa		4.58	□□□□□ -1.68
SIP1	YDR422C	PTH2	P34222	208 aa		4.58	□□□□□ -1.68
SIP1	YDR422C	IMA5	P40884	581 aa		4.58	□□□□□ -1.68
SIP1	YDR422C	CNN1	P43618	361 aa		4.58	□□□□□ -1.68
SIP1	YDR422C	RET2	P43621	546 aa		4.58	□□□□□ -1.68
SIP1	YDR422C	GPI8	P49018	411 aa		4.58	□□□□□ -1.68
SIP1	YDR422C	NSE5	Q03718	556 aa		4.58	□□□□□ -1.68
SIP1	YDR422C	HSF1	P10961	833 aa		4.58	□□□□□ -1.68
SIP1	YDR422C	CBF2	P32504	956 aa		4.58	□□□□□ -1.68
SIP1	YDR422C	PAH1	P32567	862 aa		4.58	□□□□□ -1.68
SIP1	YDR422C	SQT1	P35184	431 aa		4.58	□□□□□ -1.68
SIP1	YDR422C	TBS1	P38114	1094 aa		4.58	□□□□□ -1.68
SIP1	YDR422C	RXT2	P38255	430 aa		4.58	□□□□□ -1.68
SIP1	YDR422C	LRP1	P38801	184 aa	Known RBP	4.58	□□□□□ -1.68
SIP1	YDR422C	DOT6	P40059	670 aa	Known RBP	4.58	□□□□□ -1.68
SIP1	YDR422C	RIC1	P40395	1056 aa		4.58	□□□□□ -1.68
SIP1	YDR422C	SLS1	P42900	643 aa		4.58	□□□□□ -1.68
SIP1	YDR422C	HFI1	Q12060	488 aa		4.58	□□□□□ -1.68
SIP1	YDR422C	DBP10	Q12389	995 aa	Known RBP	4.58	□□□□□ -1.68
SIP1	YDR422C	CDC26	P14724	124 aa		4.57	□□□□□ -1.68
SIP1	YDR422C	HOP1	P20050	605 aa		4.57	□□□□□ -1.68
SIP1	YDR422C	RIM4	P38741	713 aa		4.57	□□□□□ -1.68
SIP1	YDR422C	PNT1	P38969	423 aa		4.57	□□□□□ -1.68
SIP1	YDR422C	ROG3	P43602	733 aa		4.57	□□□□□ -1.68
SIP1	YDR422C	ATP25	Q03153	612 aa		4.57	□□□□□ -1.68
SIP1	YDR422C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
SIP1	YDR422C	GUK1	P15454	187 aa	Known RBP	4.57	□□□□□ -1.68
SIP1	YDR422C	RGP1	P16664	663 aa		4.57	□□□□□ -1.68
SIP1	YDR422C	HOG1	P32485	435 aa		4.57	□□□□□ -1.68
SIP1	YDR422C	MAM1	P40065	302 aa		4.57	□□□□□ -1.68
SIP1	YDR422C	ENV11	P53246	860 aa		4.57	□□□□□ -1.68
SIP1	YDR422C	YNR065C	P53751	1116 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 101.7 ms