RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeastyeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE9YDR393W PSP2P50109 593 aaKnown RBP5.77□□□□□ -1.49
SHE9YDR393W ESC2Q06340 456 aa5.77□□□□□ -1.49
SHE9YDR393W WHI4Q07655 649 aaKnown RBP5.77□□□□□ -1.49
SHE9YDR393W YML122CQ03207 126 aa5.76□□□□□ -1.49
SHE9YDR393W YML020WQ03722 664 aa5.76□□□□□ -1.49
SHE9YDR393W SPO20Q04359 397 aa5.76□□□□□ -1.49
SHE9YDR393W KAR4P25583 335 aa5.75□□□□□ -1.49
SHE9YDR393W EFT1P32324 842 aaKnown RBP5.75□□□□□ -1.49
SHE9YDR393W YLR040CQ07988 224 aa5.75□□□□□ -1.49
SHE9YDR393W NOP8Q08287 484 aaPredicted RBP5.74□□□□□ -1.49
SHE9YDR393W ATG19P35193 415 aa5.73□□□□□ -1.49
SHE9YDR393W SAH1P39954 449 aaKnown RBP5.73□□□□□ -1.49
SHE9YDR393W SFB2P53953 876 aa5.73□□□□□ -1.49
SHE9YDR393W ASF1P32447 279 aa5.72□□□□□ -1.49
SHE9YDR393W MNR2P35724 969 aa5.72□□□□□ -1.49
SHE9YDR393W UBA2P52488 636 aa5.72□□□□□ -1.49
SHE9YDR393W YGR053CP53234 283 aa5.72□□□□□ -1.49
SHE9YDR393W YOL073CQ08232 322 aa5.72□□□□□ -1.49
SHE9YDR393W GUP2Q08929 609 aa5.72□□□□□ -1.49
SHE9YDR393W CDC12P32468 407 aaKnown RBP5.71□□□□□ -1.5
SHE9YDR393W PIN4P34217 668 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
SHE9YDR393W ABD1P32783 436 aaPredicted RBP5.7□□□□□ -1.5
SHE9YDR393W SNF7P39929 240 aaKnown RBP5.7□□□□□ -1.5
SHE9YDR393W UPC2Q12151 913 aa5.7□□□□□ -1.5
SHE9YDR393W SUL1P38359 859 aa5.69□□□□□ -1.5
SHE9YDR393W FAA4P47912 694 aaKnown RBP5.69□□□□□ -1.5
SHE9YDR393W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.69□□□□□ -1.5not detected
SHE9YDR393W CAD1P24813 409 aaKnown RBP5.68□□□□□ -1.5
SHE9YDR393W RPC82P32349 654 aa5.67□□□□□ -1.5
SHE9YDR393W STE14P32584 239 aa5.67□□□□□ -1.5
SHE9YDR393W KTR4P38131 464 aa5.67□□□□□ -1.5
SHE9YDR393W MBP1P39678 833 aa5.67□□□□□ -1.5
SHE9YDR393W SRP1Q02821 542 aaKnown RBP5.67□□□□□ -1.5
SHE9YDR393W ERG4P25340 473 aa5.66□□□□□ -1.5
SHE9YDR393W GYP7P48365 746 aa5.66□□□□□ -1.5
SHE9YDR393W TMN2Q04562 672 aa5.66□□□□□ -1.5
SHE9YDR393W TRP4P07285 380 aaPredicted RBP5.65□□□□□ -1.51
SHE9YDR393W YER158CP40095 573 aa5.65□□□□□ -1.51
SHE9YDR393W SLU7Q02775 382 aaKnown RBP5.65□□□□□ -1.51
SHE9YDR393W DUS3Q06053 668 aaKnown RBP5.65□□□□□ -1.51
SHE9YDR393W OMS1Q06668 471 aa5.65□□□□□ -1.51
SHE9YDR393W MCH5Q08777 521 aa5.65□□□□□ -1.51
SHE9YDR393W RAI1P53063 387 aaKnown RBP5.64□□□□□ -1.51
SHE9YDR393W GDE1Q02979 1223 aa5.64□□□□□ -1.51
SHE9YDR393W SED4P25365 1065 aa5.63□□□□□ -1.51
SHE9YDR393W SBA1P28707 216 aaKnown RBP5.63□□□□□ -1.51
SHE9YDR393W TSL1P38427 1098 aaKnown RBP5.63□□□□□ -1.51
SHE9YDR393W QRI1P43123 477 aaKnown RBP5.63□□□□□ -1.51
SHE9YDR393W STB4P50104 949 aa5.63□□□□□ -1.51
SHE9YDR393W YPR196WQ06595 470 aa5.63□□□□□ -1.51
SHE9YDR393W TRM13Q12383 476 aa5.63□□□□□ -1.51
SHE9YDR393W AGP1P25376 633 aa5.62□□□□□ -1.51
SHE9YDR393W YKR078WP36158 585 aaKnown RBP5.62□□□□□ -1.51
SHE9YDR393W GUS1P46655 708 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
SHE9YDR393W YMR206WQ03695 313 aa5.62□□□□□ -1.51
SHE9YDR393W ERG5P54781 538 aa5.61□□□□□ -1.51
SHE9YDR393W RNT1Q02555 471 aa5.6□□□□□ -1.51
SHE9YDR393W FAL1Q12099 399 aaKnown RBP5.6□□□□□ -1.51
SHE9YDR393W ACF2Q12168 779 aa5.6□□□□□ -1.51
SHE9YDR393W NPP1P25353 742 aa5.59□□□□□ -1.51
SHE9YDR393W YBR238CP38330 731 aaKnown RBP5.59□□□□□ -1.51
SHE9YDR393W STU2P46675 888 aa5.59□□□□□ -1.51
SHE9YDR393W YKE2P52553 114 aa5.59□□□□□ -1.51
SHE9YDR393W MUK1Q02866 612 aa5.59□□□□□ -1.51
SHE9YDR393W NOT3P06102 836 aaKnown RBP5.58□□□□□ -1.52
SHE9YDR393W CDC48P25694 835 aaKnown RBP5.58□□□□□ -1.52
SHE9YDR393W ATF1P40353 525 aa5.58□□□□□ -1.52
SHE9YDR393W KRI1P42846 591 aaKnown RBP5.58□□□□□ -1.52
SHE9YDR393W IRC10Q08118 586 aa5.58□□□□□ -1.52
SHE9YDR393W PPR1P07272 904 aaPredicted RBP5.57□□□□□ -1.52
SHE9YDR393W AFR1P33304 620 aa5.57□□□□□ -1.52
SHE9YDR393W VBA5P36172 582 aa5.57□□□□□ -1.52
SHE9YDR393W SSL1Q04673 461 aaPredicted RBP5.57□□□□□ -1.52
SHE9YDR393W ALG7P07286 448 aa5.56□□□□□ -1.52
SHE9YDR393W SEC21P32074 935 aaKnown RBP5.56□□□□□ -1.52
SHE9YDR393W TIM44Q01852 431 aa5.56□□□□□ -1.52
SHE9YDR393W FBP1P09201 348 aa5.55□□□□□ -1.52
SHE9YDR393W STE13P33894 931 aa5.55□□□□□ -1.52
SHE9YDR393W MTH1P35198 433 aa5.55□□□□□ -1.52
SHE9YDR393W SHE9Q04172 456 aa5.55□□□□□ -1.52
SHE9YDR393W YDR306CQ06640 478 aa5.55□□□□□ -1.52
SHE9YDR393W PPH3P32345 308 aa5.55□□□□□ -1.52
SHE9YDR393W YKL069WP36088 180 aa5.55□□□□□ -1.52
SHE9YDR393W CLN2P20438 545 aa5.54□□□□□ -1.52
SHE9YDR393W SDP1P40479 209 aa5.54□□□□□ -1.52
SHE9YDR393W GND2P53319 492 aa5.54□□□□□ -1.52
SHE9YDR393W VPS16Q03308 798 aa5.54□□□□□ -1.52
SHE9YDR393W PEX19Q07418 342 aa5.54□□□□□ -1.52
SHE9YDR393W RPD3P32561 433 aa5.53□□□□□ -1.52
SHE9YDR393W OPI10Q08202 246 aa5.53□□□□□ -1.52
SHE9YDR393W PIN2Q12057 282 aa5.53□□□□□ -1.52
SHE9YDR393W TUB3P09734 445 aaKnown RBP5.52□□□□□ -1.53
SHE9YDR393W CTF13P35203 478 aa5.52□□□□□ -1.53
SHE9YDR393W LGE1Q02796 332 aaKnown RBP5.52□□□□□ -1.53
SHE9YDR393W BDF2Q07442 638 aa5.52□□□□□ -1.53
SHE9YDR393W SPC42P36094 363 aa5.51□□□□□ -1.53
SHE9YDR393W CWC24P53769 259 aa5.51□□□□□ -1.53
SHE9YDR393W PRI2P20457 528 aa5.5□□□□□ -1.53
SHE9YDR393W AAR2P32357 355 aaPredicted RBP5.5□□□□□ -1.53
SHE9YDR393W CUE2P36075 443 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms