RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W DAK1P54838 584 aaKnown RBP6.32□□□□□ -1.4
SPT3YDR392W PIG1Q06216 648 aa6.32□□□□□ -1.4
SPT3YDR392W SUB2Q07478 446 aaKnown RBP6.32□□□□□ -1.4
SPT3YDR392W MYO1P08964 1928 aa6.32□□□□□ -1.4
SPT3YDR392W PER1P25625 357 aa6.31□□□□□ -1.4
SPT3YDR392W YKR073CP36153 106 aa6.31□□□□□ -1.4
SPT3YDR392W AIM46P38885 310 aa6.31□□□□□ -1.4
SPT3YDR392W GPB2P39717 880 aa6.31□□□□□ -1.4
SPT3YDR392W AOS1Q06624 347 aa6.31□□□□□ -1.4
SPT3YDR392W SGO1Q08490 590 aa6.31□□□□□ -1.4
SPT3YDR392W SOG2Q08817 791 aa6.31□□□□□ -1.4
SPT3YDR392W PSF3Q12146 194 aa6.31□□□□□ -1.4
SPT3YDR392W MSB2P32334 1306 aa6.3□□□□□ -1.4
SPT3YDR392W IKI3Q06706 1349 aaKnown RBP6.3□□□□□ -1.4
SPT3YDR392W APL2P36000 726 aaPredicted RBP6.3□□□□□ -1.4
SPT3YDR392W GPT2P36148 743 aa6.3□□□□□ -1.4
SPT3YDR392W PAN5P38787 379 aa6.3□□□□□ -1.4
SPT3YDR392W VPS72Q03388 795 aa6.3□□□□□ -1.4
SPT3YDR392W UBX5Q06682 500 aa6.3□□□□□ -1.4
SPT3YDR392W PUB1P32588 453 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
SPT3YDR392W MIC60P36112 540 aa6.29□□□□□ -1.4
SPT3YDR392W MLP1Q02455 1875 aaKnown RBP6.29□□□□□ -1.4
SPT3YDR392W IRC4Q03036 179 aa6.29□□□□□ -1.4
SPT3YDR392W SKY1Q03656 742 aa6.29□□□□□ -1.4
SPT3YDR392W SSL1Q04673 461 aaPredicted RBP6.29□□□□□ -1.4
SPT3YDR392W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
SPT3YDR392W REC8Q12188 680 aa6.29□□□□□ -1.4
SPT3YDR392W NAM7P30771 971 aaKnown RBP6.28□□□□□ -1.4
SPT3YDR392W LIP5P32875 414 aa6.28□□□□□ -1.4
SPT3YDR392W MAE1P36013 669 aaKnown RBP6.28□□□□□ -1.4
SPT3YDR392W TOM71P38825 639 aaKnown RBP6.28□□□□□ -1.4
SPT3YDR392W NMD3P38861 518 aaKnown RBP6.28□□□□□ -1.4
SPT3YDR392W SPO74P45819 413 aa6.28□□□□□ -1.4
SPT3YDR392W FAA4P47912 694 aaKnown RBP6.28□□□□□ -1.4
SPT3YDR392W FUS1P11710 512 aa6.27□□□□□ -1.41
SPT3YDR392W LCB1P25045 558 aaKnown RBP6.27□□□□□ -1.41
SPT3YDR392W MGM1P32266 881 aa6.27□□□□□ -1.41
SPT3YDR392W YKL097CP34245 136 aa6.27□□□□□ -1.41
SPT3YDR392W AKR1P39010 764 aa6.27□□□□□ -1.41
SPT3YDR392W YJL045WP47052 634 aa6.27□□□□□ -1.41
SPT3YDR392W AVT1P47082 602 aa6.27□□□□□ -1.41
SPT3YDR392W PNP1Q05788 311 aa6.27□□□□□ -1.41
SPT3YDR392W TUB2P02557 457 aaKnown RBP6.26□□□□□ -1.41
SPT3YDR392W POL5P39985 1022 aaKnown RBP6.26□□□□□ -1.41
SPT3YDR392W NTA1P40354 457 aa6.26□□□□□ -1.41
SPT3YDR392W RGD2P43556 714 aa6.26□□□□□ -1.41
SPT3YDR392W BUL2Q03758 920 aaKnown RBP6.26□□□□□ -1.41
SPT3YDR392W TAP42Q04372 366 aa6.26□□□□□ -1.41
SPT3YDR392W APC11Q12157 165 aa6.26□□□□□ -1.41
SPT3YDR392W SRP40P32583 406 aaPredicted RBP6.25□□□□□ -1.41
SPT3YDR392W YER158CP40095 573 aa6.25□□□□□ -1.41
SPT3YDR392W THI3Q07471 609 aa6.25□□□□□ -1.41
SPT3YDR392W BRE4Q07660 1125 aa6.25□□□□□ -1.41
SPT3YDR392W MSB1P21339 1137 aaKnown RBP6.24□□□□□ -1.41
SPT3YDR392W TFA2P36145 328 aa6.24□□□□□ -1.41
SPT3YDR392W SUT1P53032 299 aaKnown RBP6.24□□□□□ -1.41
SPT3YDR392W NCE103P53615 221 aa6.24□□□□□ -1.41
SPT3YDR392W YML083CQ04526 418 aa6.24□□□□□ -1.41
SPT3YDR392W NOB1Q08444 459 aaKnown RBP6.24□□□□□ -1.41
SPT3YDR392W CYC7P00045 113 aa6.23□□□□□ -1.41
SPT3YDR392W SMC1P32908 1225 aa6.23□□□□□ -1.41
SPT3YDR392W PPE1P38796 400 aa6.23□□□□□ -1.41
SPT3YDR392W VPS53P47061 822 aa6.23□□□□□ -1.41
SPT3YDR392W RMD1Q03441 430 aa6.23□□□□□ -1.41
SPT3YDR392W MMR1Q06324 491 aa6.23□□□□□ -1.41
SPT3YDR392W LAM4P38800 1345 aa6.23□□□□□ -1.41
SPT3YDR392W POX1P13711 748 aa6.22□□□□□ -1.41
SPT3YDR392W RAD55P38953 406 aa6.22□□□□□ -1.41
SPT3YDR392W PKH1Q03407 766 aa6.22□□□□□ -1.41
SPT3YDR392W HIM1Q06674 414 aa6.22□□□□□ -1.41
SPT3YDR392W ELG1Q12050 791 aa6.22□□□□□ -1.41
SPT3YDR392W LSO1Q3E827 93 aa6.22□□□□□ -1.41
SPT3YDR392W PCK1P10963 549 aa6.21□□□□□ -1.42
SPT3YDR392W HOM2P13663 365 aaKnown RBP6.21□□□□□ -1.42
SPT3YDR392W TIM23P32897 222 aa6.21□□□□□ -1.42
SPT3YDR392W IRS4P36115 615 aaKnown RBP6.21□□□□□ -1.42
SPT3YDR392W YBL028CP38202 106 aa6.21□□□□□ -1.42
SPT3YDR392W MOB1P40484 314 aa6.21□□□□□ -1.42
SPT3YDR392W NEO1P40527 1151 aa6.21□□□□□ -1.42
SPT3YDR392W FAF1P40546 346 aaPredicted RBP6.21□□□□□ -1.42
SPT3YDR392W IOC3P43596 787 aa6.21□□□□□ -1.42
SPT3YDR392W YJR124CP47159 448 aa6.21□□□□□ -1.42
SPT3YDR392W AZR1P50080 613 aa6.21□□□□□ -1.42
SPT3YDR392W YNR065CP53751 1116 aa6.21□□□□□ -1.42
SPT3YDR392W VPS64Q03944 604 aa6.21□□□□□ -1.42
SPT3YDR392W MAG2Q06436 670 aaKnown RBP6.21□□□□□ -1.42
SPT3YDR392W GUD1Q07729 489 aa6.21□□□□□ -1.42
SPT3YDR392W MSC6Q08818 692 aaKnown RBP6.21□□□□□ -1.42
SPT3YDR392W RPP0P05317 312 aaKnown RBP6.2□□□□□ -1.42
SPT3YDR392W SUP35P05453 685 aaKnown RBP6.2□□□□□ -1.42
SPT3YDR392W MSD1P15179 658 aaKnown RBP6.2□□□□□ -1.42
SPT3YDR392W FMO1P38866 432 aa6.2□□□□□ -1.42
SPT3YDR392W SNU71P53207 620 aaKnown RBP6.2□□□□□ -1.42
SPT3YDR392W FCP1Q03254 732 aa6.2□□□□□ -1.42
SPT3YDR392W MEX67Q99257 599 aaKnown RBP6.2□□□□□ -1.42
SPT3YDR392W FUR4P05316 633 aaKnown RBP6.19□□□□□ -1.42
SPT3YDR392W KAR2P16474 682 aaKnown RBP6.19□□□□□ -1.42
SPT3YDR392W DUR3P33413 735 aa6.19□□□□□ -1.42
SPT3YDR392W PSY2P40164 858 aa6.19□□□□□ -1.42
SPT3YDR392W YGR125WP53273 1036 aa6.19□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 72.7 ms