RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W RFC1P38630 861 aaKnown RBP1.62□□□□□ -2.15
MSN5YDR335W RRM3P38766 723 aa1.62□□□□□ -2.15
MSN5YDR335W DYS1P38791 387 aa1.62□□□□□ -2.15
MSN5YDR335W PRK1P40494 810 aa1.62□□□□□ -2.15
MSN5YDR335W YLR352WQ06479 807 aa1.62□□□□□ -2.15
MSN5YDR335W FMP25Q08023 583 aa1.62□□□□□ -2.15
MSN5YDR335W RTT10Q08924 1013 aa1.62□□□□□ -2.15
MSN5YDR335W MCD1Q12158 566 aa1.62□□□□□ -2.15
MSN5YDR335W MYO4P32492 1471 aa1.62□□□□□ -2.15
MSN5YDR335W LEU1P07264 779 aaKnown RBP1.62□□□□□ -2.15
MSN5YDR335W HVG1P0CE11 249 aa1.62□□□□□ -2.15
MSN5YDR335W SEC23P15303 768 aaKnown RBP1.62□□□□□ -2.15
MSN5YDR335W EUG1P32474 517 aa1.62□□□□□ -2.15
MSN5YDR335W SMC1P32908 1225 aa1.62□□□□□ -2.15
MSN5YDR335W POP2P39008 433 aa1.62□□□□□ -2.15
MSN5YDR335W ICP55P40051 511 aa1.62□□□□□ -2.15
MSN5YDR335W YNL193WP53870 558 aa1.62□□□□□ -2.15
MSN5YDR335W PPM2Q08282 695 aa1.62□□□□□ -2.15
MSN5YDR335W RRG1Q12167 365 aaPredicted RBP1.62□□□□□ -2.15
MSN5YDR335W DPH6Q12429 685 aa1.62□□□□□ -2.15
MSN5YDR335W USO1P25386 1790 aa1.62□□□□□ -2.15
MSN5YDR335W SSM4P40318 1319 aa1.62□□□□□ -2.15
MSN5YDR335W GPM1P00950 247 aaKnown RBP1.62□□□□□ -2.15
MSN5YDR335W INO1P11986 533 aa1.62□□□□□ -2.15
MSN5YDR335W HCA4P20448 770 aaKnown RBP1.62□□□□□ -2.15
MSN5YDR335W GSY1P23337 708 aa1.62□□□□□ -2.15
MSN5YDR335W PTP2P29461 750 aa1.62□□□□□ -2.15
MSN5YDR335W PLC1P32383 869 aa1.62□□□□□ -2.15
MSN5YDR335W CDC11P32458 415 aa1.62□□□□□ -2.15
MSN5YDR335W NIC96P34077 839 aa1.62□□□□□ -2.15
MSN5YDR335W SCD5P34758 872 aa1.62□□□□□ -2.15
MSN5YDR335W CCT3P39077 534 aaKnown RBP1.62□□□□□ -2.15
MSN5YDR335W SNF7P39929 240 aaKnown RBP1.62□□□□□ -2.15
MSN5YDR335W RPS0BP46654 252 aaKnown RBP1.62□□□□□ -2.15
MSN5YDR335W BTN2P53286 410 aa1.62□□□□□ -2.15
MSN5YDR335W CDC55Q00362 526 aa1.62□□□□□ -2.15
MSN5YDR335W HEH2Q03281 663 aa1.62□□□□□ -2.15
MSN5YDR335W DBF20P32328 564 aa1.61□□□□□ -2.15
MSN5YDR335W DOM34P33309 386 aa1.61□□□□□ -2.15
MSN5YDR335W TIF4631P39935 952 aaKnown RBP1.61□□□□□ -2.15
MSN5YDR335W UBX4P54730 416 aa1.61□□□□□ -2.15
MSN5YDR335W ULP1Q02724 621 aa1.61□□□□□ -2.15
MSN5YDR335W SYT1Q06836 1226 aa1.61□□□□□ -2.15
MSN5YDR335W GAL1P04385 528 aa1.61□□□□□ -2.15
MSN5YDR335W HXK1P04806 485 aaKnown RBP1.61□□□□□ -2.15
MSN5YDR335W TY1A-LR4P0C2I8 440 aaKnown RBP1.61□□□□□ -2.15
MSN5YDR335W TY1A-DR6P0CX70 440 aa1.61□□□□□ -2.15
MSN5YDR335W TY1A-ER1P0CX71 440 aa1.61□□□□□ -2.15
MSN5YDR335W TY1A-LR2P0CX72 440 aa1.61□□□□□ -2.15
MSN5YDR335W TY1A-PLP0CX73 440 aa1.61□□□□□ -2.15
MSN5YDR335W TY1A-JR1P0CX74 440 aa1.61□□□□□ -2.15
MSN5YDR335W TY1A-LR3P0CX75 440 aa1.61□□□□□ -2.15
MSN5YDR335W TY1A-ML2P0CX76 440 aa1.61□□□□□ -2.15
MSN5YDR335W TOP3P13099 656 aa1.61□□□□□ -2.15
MSN5YDR335W PHO81P17442 1178 aa1.61□□□□□ -2.15
MSN5YDR335W RAD53P22216 821 aa1.61□□□□□ -2.15
MSN5YDR335W NAR1P23503 491 aaKnown RBP1.61□□□□□ -2.15
MSN5YDR335W PUF4P25339 888 aaKnown RBP RIP-Chip data1.61□□□□□ -2.15not detected
MSN5YDR335W PER1P25625 357 aa1.61□□□□□ -2.15
MSN5YDR335W PYC2P32327 1180 aaKnown RBP1.61□□□□□ -2.15
MSN5YDR335W VPH1P32563 840 aaKnown RBP1.61□□□□□ -2.15
MSN5YDR335W BEM3P32873 1128 aa1.61□□□□□ -2.15
MSN5YDR335W YHR020WP38708 688 aaKnown RBP1.61□□□□□ -2.15
MSN5YDR335W GDH3P39708 457 aa1.61□□□□□ -2.15
MSN5YDR335W YEL068CP39977 110 aa1.61□□□□□ -2.15
MSN5YDR335W LSB6P42951 607 aa1.61□□□□□ -2.15
MSN5YDR335W YGL176CP46945 554 aa1.61□□□□□ -2.15
MSN5YDR335W PIP2P52960 996 aa1.61□□□□□ -2.15
MSN5YDR335W YMR111CQ04461 462 aaPredicted RBP1.61□□□□□ -2.15
MSN5YDR335W NEW1Q08972 1196 aaKnown RBP1.61□□□□□ -2.15
MSN5YDR335W LAP2Q10740 671 aa1.61□□□□□ -2.15
MSN5YDR335W TY1A-GR1Q12085 440 aa1.61□□□□□ -2.15
MSN5YDR335W TY1A-PR3Q6Q5H1 440 aaKnown RBP1.61□□□□□ -2.15
MSN5YDR335W TY1A-OLQ92392 440 aaKnown RBP1.61□□□□□ -2.15
MSN5YDR335W HSH49Q99181 213 aaPredicted RBP1.61□□□□□ -2.15
MSN5YDR335W SUI2P20459 304 aaKnown RBP1.61□□□□□ -2.15
MSN5YDR335W MSH1P25846 959 aa1.61□□□□□ -2.15
MSN5YDR335W DPH2P32461 534 aa1.61□□□□□ -2.15
MSN5YDR335W YIL165CP40446 119 aa1.61□□□□□ -2.15
MSN5YDR335W SAP185P40856 1058 aa1.61□□□□□ -2.15
MSN5YDR335W UTP22P53254 1237 aaPredicted RBP1.61□□□□□ -2.15
MSN5YDR335W YNR061CP53747 219 aa1.61□□□□□ -2.15
MSN5YDR335W YNR065CP53751 1116 aa1.61□□□□□ -2.15
MSN5YDR335W GIC2Q06648 383 aa1.61□□□□□ -2.15
MSN5YDR335W GUD1Q07729 489 aa1.61□□□□□ -2.15
MSN5YDR335W ALG6Q12001 544 aaKnown RBP1.61□□□□□ -2.15
MSN5YDR335W PHM7Q12252 991 aa1.61□□□□□ -2.15
MSN5YDR335W TOP2P06786 1428 aaKnown RBP1.6□□□□□ -2.15
MSN5YDR335W RPP1AP05318 106 aaPredicted RBP1.6□□□□□ -2.15
MSN5YDR335W ERS1P17261 260 aa1.6□□□□□ -2.15
MSN5YDR335W DAL7P21826 554 aa1.6□□□□□ -2.15
MSN5YDR335W KCC4P25389 1037 aa1.6□□□□□ -2.15
MSN5YDR335W PGS1P25578 521 aa1.6□□□□□ -2.15
MSN5YDR335W RPS0AP32905 252 aaKnown RBP1.6□□□□□ -2.15
MSN5YDR335W MRP8P35719 219 aa1.6□□□□□ -2.15
MSN5YDR335W YRO2P38079 344 aa1.6□□□□□ -2.15
MSN5YDR335W MUM2P38236 366 aa1.6□□□□□ -2.15
MSN5YDR335W YBR238CP38330 731 aaKnown RBP1.6□□□□□ -2.15
MSN5YDR335W PSY2P40164 858 aa1.6□□□□□ -2.15
MSN5YDR335W ERR3P42222 437 aa1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms