RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W CDC12P32468 407 aaKnown RBP4.02□□□□□ -1.77
SSF2YDR312W ECM21P38167 1117 aaKnown RBP4.02□□□□□ -1.77
SSF2YDR312W SRP1Q02821 542 aaKnown RBP4.02□□□□□ -1.77
SSF2YDR312W RPP2AP05319 106 aaKnown RBP4.01□□□□□ -1.77
SSF2YDR312W HIS5P07172 385 aa4.01□□□□□ -1.77
SSF2YDR312W YBR184WP38299 523 aa4.01□□□□□ -1.77
SSF2YDR312W YGR012WP53206 393 aa4.01□□□□□ -1.77
SSF2YDR312W DUS3Q06053 668 aaKnown RBP4.01□□□□□ -1.77
SSF2YDR312W CDA1Q06702 301 aa4.01□□□□□ -1.77
SSF2YDR312W ECM5Q03214 1411 aa4□□□□□ -1.77
SSF2YDR312W HCM1P25364 564 aa4□□□□□ -1.77
SSF2YDR312W SRP101P32916 621 aa4□□□□□ -1.77
SSF2YDR312W TRM2P33753 639 aa4□□□□□ -1.77
SSF2YDR312W PLB1P39105 664 aa4□□□□□ -1.77
SSF2YDR312W NPP2P39997 493 aa4□□□□□ -1.77
SSF2YDR312W CHA4P43634 648 aa4□□□□□ -1.77
SSF2YDR312W GUS1P46655 708 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
SSF2YDR312W TY1B-DR4Q07793 1604 aa3.99□□□□□ -1.77
SSF2YDR312W HSF1P10961 833 aa3.99□□□□□ -1.77
SSF2YDR312W RAD4P14736 754 aa3.99□□□□□ -1.77
SSF2YDR312W MRP8P35719 219 aa3.99□□□□□ -1.77
SSF2YDR312W PBY1P38254 753 aa3.99□□□□□ -1.77
SSF2YDR312W IRR1P40541 1150 aa3.99□□□□□ -1.77
SSF2YDR312W NNF1P47149 201 aa3.99□□□□□ -1.77
SSF2YDR312W GYP7P48365 746 aa3.99□□□□□ -1.77
SSF2YDR312W SFB2P53953 876 aa3.99□□□□□ -1.77
SSF2YDR312W NAN1Q02931 896 aaKnown RBP3.99□□□□□ -1.77
SSF2YDR312W NTO1Q12311 748 aa3.99□□□□□ -1.77
SSF2YDR312W PMA1P05030 918 aaKnown RBP3.98□□□□□ -1.77
SSF2YDR312W SPE1P08432 466 aa3.98□□□□□ -1.77
SSF2YDR312W RPC82P32349 654 aa3.98□□□□□ -1.77
SSF2YDR312W DCG1P32460 244 aa3.98□□□□□ -1.77
SSF2YDR312W CCC2P38995 1004 aa3.98□□□□□ -1.77
SSF2YDR312W PFD1P46988 109 aa3.98□□□□□ -1.77
SSF2YDR312W PSP2P50109 593 aaKnown RBP3.98□□□□□ -1.77
SSF2YDR312W PHO23P50947 330 aa3.98□□□□□ -1.77
SSF2YDR312W FMP25Q08023 583 aa3.98□□□□□ -1.77
SSF2YDR312W RPL8BP29453 256 aaKnown RBP3.97□□□□□ -1.77
SSF2YDR312W YKR078WP36158 585 aaKnown RBP3.97□□□□□ -1.77
SSF2YDR312W OCA5P38738 679 aa3.97□□□□□ -1.77
SSF2YDR312W IOC3P43596 787 aa3.97□□□□□ -1.77
SSF2YDR312W YDR306CQ06640 478 aa3.97□□□□□ -1.77
SSF2YDR312W PUS9Q12069 462 aa3.97□□□□□ -1.77
SSF2YDR312W PMI40P29952 429 aaKnown RBP3.96□□□□□ -1.78
SSF2YDR312W ATG19P35193 415 aa3.96□□□□□ -1.78
SSF2YDR312W TSL1P38427 1098 aaKnown RBP3.96□□□□□ -1.78
SSF2YDR312W YER158CP40095 573 aa3.96□□□□□ -1.78
SSF2YDR312W URM1P40554 99 aaPredicted RBP3.96□□□□□ -1.78
SSF2YDR312W TIM54P47045 478 aa3.96□□□□□ -1.78
SSF2YDR312W YJL049WP47048 450 aa3.96□□□□□ -1.78
SSF2YDR312W EXG2P52911 562 aa3.96□□□□□ -1.78
SSF2YDR312W HUL5P53119 910 aa3.96□□□□□ -1.78
SSF2YDR312W PNS1Q12412 539 aa3.96□□□□□ -1.78
SSF2YDR312W KCS1Q12494 1050 aa3.96□□□□□ -1.78
SSF2YDR312W PPH3P32345 308 aa3.95□□□□□ -1.78
SSF2YDR312W MSE1P48525 536 aa3.95□□□□□ -1.78
SSF2YDR312W URN1Q06525 465 aaKnown RBP3.95□□□□□ -1.78
SSF2YDR312W YPR196WQ06595 470 aa3.95□□□□□ -1.78
SSF2YDR312W SPO75Q07798 868 aa3.95□□□□□ -1.78
SSF2YDR312W YOL098CQ12496 1037 aa3.95□□□□□ -1.78
SSF2YDR312W ADE8P04161 214 aa3.94□□□□□ -1.78
SSF2YDR312W NPP1P25353 742 aa3.94□□□□□ -1.78
SSF2YDR312W CDC48P25694 835 aaKnown RBP3.94□□□□□ -1.78
SSF2YDR312W AAR2P32357 355 aaPredicted RBP3.94□□□□□ -1.78
SSF2YDR312W HBS1P32769 611 aaKnown RBP3.94□□□□□ -1.78
SSF2YDR312W YHR020WP38708 688 aaKnown RBP3.94□□□□□ -1.78
SSF2YDR312W ALR2P43553 858 aa3.94□□□□□ -1.78
SSF2YDR312W YKE2P52553 114 aa3.94□□□□□ -1.78
SSF2YDR312W NCS6P53088 359 aa3.94□□□□□ -1.78
SSF2YDR312W UTP8P53276 713 aaKnown RBP3.94□□□□□ -1.78
SSF2YDR312W SUN4P53616 420 aa3.94□□□□□ -1.78
SSF2YDR312W NSE3Q05541 303 aa3.94□□□□□ -1.78
SSF2YDR312W EAF1Q06337 982 aa3.94□□□□□ -1.78
SSF2YDR312W UBX5Q06682 500 aa3.94□□□□□ -1.78
SSF2YDR312W BDF2Q07442 638 aa3.94□□□□□ -1.78
SSF2YDR312W PRP9P19736 530 aaKnown RBP3.93□□□□□ -1.78
SSF2YDR312W AFR1P33304 620 aa3.93□□□□□ -1.78
SSF2YDR312W DEF1P35732 738 aaKnown RBP3.93□□□□□ -1.78
SSF2YDR312W YRO2P38079 344 aa3.93□□□□□ -1.78
SSF2YDR312W YBR238CP38330 731 aaKnown RBP3.93□□□□□ -1.78
SSF2YDR312W SIT1P39980 628 aa3.93□□□□□ -1.78
SSF2YDR312W AIM21P40563 679 aa3.93□□□□□ -1.78
SSF2YDR312W RAI1P53063 387 aaKnown RBP3.93□□□□□ -1.78
SSF2YDR312W ERP6P53198 216 aa3.93□□□□□ -1.78
SSF2YDR312W YGR125WP53273 1036 aa3.93□□□□□ -1.78
SSF2YDR312W TPO2P53283 614 aa3.93□□□□□ -1.78
SSF2YDR312W GIS1Q03833 894 aa3.93□□□□□ -1.78
SSF2YDR312W WHI4Q07655 649 aaKnown RBP3.93□□□□□ -1.78
SSF2YDR312W CDC53Q12018 815 aaKnown RBP3.93□□□□□ -1.78
SSF2YDR312W NPC2Q12408 173 aa3.93□□□□□ -1.78
SSF2YDR312W OSH2Q12451 1283 aa3.93□□□□□ -1.78
SSF2YDR312W PFK1P16861 987 aaKnown RBP3.92□□□□□ -1.78
SSF2YDR312W ARE1P25628 610 aa3.92□□□□□ -1.78
SSF2YDR312W FLC1Q08967 793 aa3.92□□□□□ -1.78
SSF2YDR312W UPC2Q12151 913 aa3.92□□□□□ -1.78
SSF2YDR312W CIT1P00890 479 aa3.91□□□□□ -1.78
SSF2YDR312W NOT3P06102 836 aaKnown RBP3.91□□□□□ -1.78
SSF2YDR312W STI1P15705 589 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
SSF2YDR312W HSP60P19882 572 aaKnown RBP3.91□□□□□ -1.78
SSF2YDR312W SRP40P32583 406 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms