RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeastyeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BFR2YDR299W SPO20Q04359 397 aa1.8□□□□□ -2.12
BFR2YDR299W YPR196WQ06595 470 aa1.8□□□□□ -2.12
BFR2YDR299W WHI4Q07655 649 aaKnown RBP1.8□□□□□ -2.12
BFR2YDR299W YOL073CQ08232 322 aa1.8□□□□□ -2.12
BFR2YDR299W YLL058WQ12198 575 aa1.8□□□□□ -2.12
BFR2YDR299W GIC1P38785 314 aa1.79□□□□□ -2.12
BFR2YDR299W ATF1P40353 525 aa1.79□□□□□ -2.12
BFR2YDR299W EEB1Q02891 456 aa1.79□□□□□ -2.12
BFR2YDR299W OMS1Q06668 471 aa1.79□□□□□ -2.12
BFR2YDR299W LAS17Q12446 633 aa1.79□□□□□ -2.12
BFR2YDR299W CDC34P14682 295 aa1.78□□□□□ -2.12
BFR2YDR299W ERG4P25340 473 aa1.78□□□□□ -2.12
BFR2YDR299W SED4P25365 1065 aa1.78□□□□□ -2.12
BFR2YDR299W YKL151CP36059 337 aa1.78□□□□□ -2.12
BFR2YDR299W KTR4P38131 464 aa1.78□□□□□ -2.12
BFR2YDR299W URM1P40554 99 aaPredicted RBP1.78□□□□□ -2.12
BFR2YDR299W SFB2P53953 876 aa1.78□□□□□ -2.12
BFR2YDR299W NPL3Q01560 414 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
BFR2YDR299W TMN2Q04562 672 aa1.78□□□□□ -2.12
BFR2YDR299W YLR225CQ05948 407 aaKnown RBP1.78□□□□□ -2.12
BFR2YDR299W DUT1P33317 147 aa1.77□□□□□ -2.13
BFR2YDR299W BUL1P48524 976 aa1.77□□□□□ -2.13
BFR2YDR299W STB4P50104 949 aa1.77□□□□□ -2.13
BFR2YDR299W RNT1Q02555 471 aa1.77□□□□□ -2.13
BFR2YDR299W SRP1Q02821 542 aaKnown RBP1.77□□□□□ -2.13
BFR2YDR299W RMD1Q03441 430 aa1.77□□□□□ -2.13
BFR2YDR299W BDF2Q07442 638 aa1.77□□□□□ -2.13
BFR2YDR299W GUP2Q08929 609 aa1.77□□□□□ -2.13
BFR2YDR299W ACF2Q12168 779 aa1.77□□□□□ -2.13
BFR2YDR299W PIN4P34217 668 aaKnown RBP RIP-Chip data1.77□□□□□ -2.13not detected
BFR2YDR299W CUE2P36075 443 aaKnown RBP1.77□□□□□ -2.13
BFR2YDR299W NPP2P39997 493 aa1.77□□□□□ -2.13
BFR2YDR299W YER158CP40095 573 aa1.77□□□□□ -2.13
BFR2YDR299W QRI1P43123 477 aaKnown RBP1.77□□□□□ -2.13
BFR2YDR299W RAI1P53063 387 aaKnown RBP1.77□□□□□ -2.13
BFR2YDR299W OYE2Q03558 400 aaKnown RBP1.77□□□□□ -2.13
BFR2YDR299W DUS3Q06053 668 aaKnown RBP1.77□□□□□ -2.13
BFR2YDR299W ESC2Q06340 456 aa1.77□□□□□ -2.13
BFR2YDR299W RRP15Q06511 250 aaPredicted RBP1.77□□□□□ -2.13
BFR2YDR299W TRP4P07285 380 aaPredicted RBP1.76□□□□□ -2.13
BFR2YDR299W RPC82P32349 654 aa1.76□□□□□ -2.13
BFR2YDR299W ABD1P32783 436 aaPredicted RBP1.76□□□□□ -2.13
BFR2YDR299W MTH1P35198 433 aa1.76□□□□□ -2.13
BFR2YDR299W SPC42P36094 363 aa1.76□□□□□ -2.13
BFR2YDR299W MET10P39692 1035 aa1.76□□□□□ -2.13
BFR2YDR299W GND2P53319 492 aa1.76□□□□□ -2.13
BFR2YDR299W MUK1Q02866 612 aa1.76□□□□□ -2.13
BFR2YDR299W IRC10Q08118 586 aa1.76□□□□□ -2.13
BFR2YDR299W UPC2Q12151 913 aa1.76□□□□□ -2.13
BFR2YDR299W PPR1P07272 904 aaPredicted RBP1.75□□□□□ -2.13
BFR2YDR299W ALG7P07286 448 aa1.75□□□□□ -2.13
BFR2YDR299W PPH3P32345 308 aa1.75□□□□□ -2.13
BFR2YDR299W ASF1P32447 279 aa1.75□□□□□ -2.13
BFR2YDR299W CDC12P32468 407 aaKnown RBP1.75□□□□□ -2.13
BFR2YDR299W PEX2P32800 271 aa1.75□□□□□ -2.13
BFR2YDR299W MBP1P39678 833 aa1.75□□□□□ -2.13
BFR2YDR299W SNM1P40993 198 aa1.75□□□□□ -2.13
BFR2YDR299W KRI1P42846 591 aaKnown RBP1.75□□□□□ -2.13
BFR2YDR299W HBT1Q07653 1046 aaKnown RBP1.75□□□□□ -2.13
BFR2YDR299W TRM13Q12383 476 aa1.75□□□□□ -2.13
BFR2YDR299W NOT3P06102 836 aaKnown RBP1.74□□□□□ -2.13
BFR2YDR299W MNR2P35724 969 aa1.74□□□□□ -2.13
BFR2YDR299W VPS30Q02948 557 aa1.74□□□□□ -2.13
BFR2YDR299W TAF7Q05021 590 aa1.74□□□□□ -2.13
BFR2YDR299W PEX19Q07418 342 aa1.74□□□□□ -2.13
BFR2YDR299W FAL1Q12099 399 aaKnown RBP1.74□□□□□ -2.13
BFR2YDR299W MET3P08536 511 aa1.73□□□□□ -2.13
BFR2YDR299W CDC48P25694 835 aaKnown RBP1.73□□□□□ -2.13
BFR2YDR299W HEM3P28789 327 aa1.73□□□□□ -2.13
BFR2YDR299W FAA4P47912 694 aaKnown RBP1.73□□□□□ -2.13
BFR2YDR299W GYP7P48365 746 aa1.73□□□□□ -2.13
BFR2YDR299W GDE1Q02979 1223 aa1.73□□□□□ -2.13
BFR2YDR299W YDR306CQ06640 478 aa1.73□□□□□ -2.13
BFR2YDR299W SBA1P28707 216 aaKnown RBP1.73□□□□□ -2.13
BFR2YDR299W SEC21P32074 935 aaKnown RBP1.73□□□□□ -2.13
BFR2YDR299W STE14P32584 239 aa1.73□□□□□ -2.13
BFR2YDR299W YKR078WP36158 585 aaKnown RBP1.73□□□□□ -2.13
BFR2YDR299W PPS1P38148 807 aa1.73□□□□□ -2.13
BFR2YDR299W SDS3P40505 327 aa1.73□□□□□ -2.13
BFR2YDR299W DAS1P47005 663 aa1.73□□□□□ -2.13
BFR2YDR299W YGR053CP53234 283 aa1.73□□□□□ -2.13
BFR2YDR299W CWC24P53769 259 aa1.73□□□□□ -2.13
BFR2YDR299W YML020WQ03722 664 aa1.73□□□□□ -2.13
BFR2YDR299W DLT1Q04216 342 aa1.73□□□□□ -2.13
BFR2YDR299W SSL1Q04673 461 aaPredicted RBP1.73□□□□□ -2.13
BFR2YDR299W FRE5Q08908 694 aa1.73□□□□□ -2.13
BFR2YDR299W RFA1P22336 621 aaKnown RBP1.72□□□□□ -2.13
BFR2YDR299W AAR2P32357 355 aaPredicted RBP1.72□□□□□ -2.13
BFR2YDR299W RPD3P32561 433 aa1.72□□□□□ -2.13
BFR2YDR299W STE13P33894 931 aa1.72□□□□□ -2.13
BFR2YDR299W TSL1P38427 1098 aaKnown RBP1.72□□□□□ -2.13
BFR2YDR299W YHL017WP38745 532 aa1.72□□□□□ -2.13
BFR2YDR299W ELO3P40319 345 aa1.72□□□□□ -2.13
BFR2YDR299W YIL108WP40483 696 aaKnown RBP1.72□□□□□ -2.13
BFR2YDR299W SLU7Q02775 382 aaKnown RBP1.72□□□□□ -2.13
BFR2YDR299W CRR1Q05790 422 aa1.72□□□□□ -2.13
BFR2YDR299W MRH1Q12117 320 aaPredicted RBP1.72□□□□□ -2.13
BFR2YDR299W SWM1Q12379 170 aa1.72□□□□□ -2.13
BFR2YDR299W ADE8P04161 214 aa1.71□□□□□ -2.14
BFR2YDR299W NPP1P25353 742 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 9350.9 ms