RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C PMT7Q06644 662 aa2.14□□□□□ -2.07
MSH6YDR097C GIC2Q06648 383 aa2.14□□□□□ -2.07
MSH6YDR097C MSD1P15179 658 aaKnown RBP2.14□□□□□ -2.07
MSH6YDR097C PRP9P19736 530 aaKnown RBP2.14□□□□□ -2.07
MSH6YDR097C GSY1P23337 708 aa2.14□□□□□ -2.07
MSH6YDR097C RKM3P38222 552 aa2.14□□□□□ -2.07
MSH6YDR097C PEA2P40091 420 aa2.14□□□□□ -2.07
MSH6YDR097C AAD14P42884 376 aa2.14□□□□□ -2.07
MSH6YDR097C LSB6P42951 607 aa2.14□□□□□ -2.07
MSH6YDR097C GUS1P46655 708 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
MSH6YDR097C MTR4P47047 1073 aaKnown RBP2.14□□□□□ -2.07
MSH6YDR097C MTC3P53077 123 aa2.14□□□□□ -2.07
MSH6YDR097C TFC6Q06339 672 aa2.14□□□□□ -2.07
MSH6YDR097C TRE2Q08693 809 aa2.14□□□□□ -2.07
MSH6YDR097C YOR378WQ08902 515 aa2.14□□□□□ -2.07
MSH6YDR097C ARG82P07250 355 aa2.14□□□□□ -2.07
MSH6YDR097C HTS1P07263 546 aaKnown RBP2.14□□□□□ -2.07
MSH6YDR097C FUS1P11710 512 aa2.14□□□□□ -2.07
MSH6YDR097C IDI1P15496 288 aa2.14□□□□□ -2.07
MSH6YDR097C SEC18P18759 758 aaKnown RBP2.14□□□□□ -2.07
MSH6YDR097C PBY1P38254 753 aa2.14□□□□□ -2.07
MSH6YDR097C SIP5P40210 489 aaKnown RBP2.14□□□□□ -2.07
MSH6YDR097C LEM3P42838 414 aa2.14□□□□□ -2.07
MSH6YDR097C UBP15P50101 1230 aa2.14□□□□□ -2.07
MSH6YDR097C HEH2Q03281 663 aa2.14□□□□□ -2.07
MSH6YDR097C TIF35Q04067 274 aaKnown RBP2.14□□□□□ -2.07
MSH6YDR097C YMR018WQ04364 514 aa2.14□□□□□ -2.07
MSH6YDR097C SLP1Q12232 587 aa2.14□□□□□ -2.07
MSH6YDR097C APM4Q99186 491 aa2.14□□□□□ -2.07
MSH6YDR097C PIF1P07271 859 aa2.13□□□□□ -2.07
MSH6YDR097C YPT7P32939 208 aa2.13□□□□□ -2.07
MSH6YDR097C KTR4P38131 464 aa2.13□□□□□ -2.07
MSH6YDR097C INP51P40559 946 aaKnown RBP2.13□□□□□ -2.07
MSH6YDR097C SLS1P42900 643 aa2.13□□□□□ -2.07
MSH6YDR097C LYS5P50113 272 aa2.13□□□□□ -2.07
MSH6YDR097C GUP1P53154 560 aa2.13□□□□□ -2.07
MSH6YDR097C COG8Q04632 607 aa2.13□□□□□ -2.07
MSH6YDR097C COG4Q06096 861 aa2.13□□□□□ -2.07
MSH6YDR097C GUD1Q07729 489 aa2.13□□□□□ -2.07
MSH6YDR097C AVO1Q08236 1176 aa2.13□□□□□ -2.07
MSH6YDR097C YDR461C-AQ2V2P7 80 aa2.13□□□□□ -2.07
MSH6YDR097C HBN1Q96VH4 193 aa2.13□□□□□ -2.07
MSH6YDR097C CDC19P00549 500 aaKnown RBP2.13□□□□□ -2.07
MSH6YDR097C AMS1P22855 1083 aa2.13□□□□□ -2.07
MSH6YDR097C PWP2P25635 923 aaKnown RBP2.13□□□□□ -2.07
MSH6YDR097C GPP1P41277 250 aaKnown RBP2.13□□□□□ -2.07
MSH6YDR097C PMT3P47190 753 aa2.13□□□□□ -2.07
MSH6YDR097C SOK2P53438 785 aaPredicted RBP2.13□□□□□ -2.07
MSH6YDR097C YNR065CP53751 1116 aa2.13□□□□□ -2.07
MSH6YDR097C YHM2Q04013 314 aa2.13□□□□□ -2.07
MSH6YDR097C HFD1Q04458 532 aa2.13□□□□□ -2.07
MSH6YDR097C URB1P34241 1764 aaKnown RBP2.13□□□□□ -2.07
MSH6YDR097C FKS3Q04952 1785 aa2.13□□□□□ -2.07
MSH6YDR097C CDC9P04819 755 aa2.13□□□□□ -2.07
MSH6YDR097C RPP1AP05318 106 aaPredicted RBP2.13□□□□□ -2.07
MSH6YDR097C SYP1P25623 870 aaKnown RBP2.13□□□□□ -2.07
MSH6YDR097C MTC2P34246 357 aa2.13□□□□□ -2.07
MSH6YDR097C RPN3P40016 523 aaKnown RBP2.13□□□□□ -2.07
MSH6YDR097C SHR5P41912 237 aa2.13□□□□□ -2.07
MSH6YDR097C NPL3Q01560 414 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
MSH6YDR097C PTC5Q12511 572 aa2.13□□□□□ -2.07
MSH6YDR097C TRK1P12685 1235 aa2.12□□□□□ -2.07
MSH6YDR097C DBP5P20449 482 aaKnown RBP2.12□□□□□ -2.07
MSH6YDR097C PRP45P28004 379 aaPredicted RBP2.12□□□□□ -2.07
MSH6YDR097C EUG1P32474 517 aa2.12□□□□□ -2.07
MSH6YDR097C VPS24P36095 224 aaKnown RBP2.12□□□□□ -2.07
MSH6YDR097C YKR078WP36158 585 aaKnown RBP2.12□□□□□ -2.07
MSH6YDR097C TRZ1P36159 838 aaPredicted RBP2.12□□□□□ -2.07
MSH6YDR097C NCL1P38205 684 aaKnown RBP2.12□□□□□ -2.07
MSH6YDR097C BOI2P39969 1040 aa2.12□□□□□ -2.07
MSH6YDR097C GCV1P48015 400 aa2.12□□□□□ -2.07
MSH6YDR097C NBA1Q08229 501 aaKnown RBP2.12□□□□□ -2.07
MSH6YDR097C RKM4Q12504 494 aa2.12□□□□□ -2.07
MSH6YDR097C FIG2P25653 1609 aa2.12□□□□□ -2.07
MSH6YDR097C TY1A-LR4P0C2I8 440 aaKnown RBP2.12□□□□□ -2.07
MSH6YDR097C TY1A-DR6P0CX70 440 aa2.12□□□□□ -2.07
MSH6YDR097C TY1A-ER1P0CX71 440 aa2.12□□□□□ -2.07
MSH6YDR097C TY1A-LR2P0CX72 440 aa2.12□□□□□ -2.07
MSH6YDR097C TY1A-PLP0CX73 440 aa2.12□□□□□ -2.07
MSH6YDR097C TY1A-JR1P0CX74 440 aa2.12□□□□□ -2.07
MSH6YDR097C TY1A-LR3P0CX75 440 aa2.12□□□□□ -2.07
MSH6YDR097C TY1A-ML2P0CX76 440 aa2.12□□□□□ -2.07
MSH6YDR097C SST2P11972 698 aaKnown RBP2.12□□□□□ -2.07
MSH6YDR097C UGA2P38067 497 aa2.12□□□□□ -2.07
MSH6YDR097C NAB3P38996 802 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
MSH6YDR097C NOC2P39744 710 aaKnown RBP2.12□□□□□ -2.07
MSH6YDR097C SEC26P41810 973 aaKnown RBP2.12□□□□□ -2.07
MSH6YDR097C KRI1P42846 591 aaKnown RBP2.12□□□□□ -2.07
MSH6YDR097C YJR096WP47137 282 aa2.12□□□□□ -2.07
MSH6YDR097C TY1A-GR1Q12085 440 aa2.12□□□□□ -2.07
MSH6YDR097C TY1A-PR3Q6Q5H1 440 aaKnown RBP2.12□□□□□ -2.07
MSH6YDR097C TY1A-OLQ92392 440 aaKnown RBP2.12□□□□□ -2.07
MSH6YDR097C RSF2P46974 1380 aa2.12□□□□□ -2.07
MSH6YDR097C SRB8P25648 1427 aa2.12□□□□□ -2.07
MSH6YDR097C CDC4P07834 779 aa2.12□□□□□ -2.07
MSH6YDR097C HSC82P15108 705 aaKnown RBP2.12□□□□□ -2.07
MSH6YDR097C MIH1P23748 554 aa2.12□□□□□ -2.07
MSH6YDR097C YKL151CP36059 337 aa2.12□□□□□ -2.07
MSH6YDR097C PNT1P38969 423 aa2.12□□□□□ -2.07
MSH6YDR097C MXR1P40029 184 aa2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms