RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C GYP7P48365 746 aa6.11□□□□□ -1.43
RRI1YDL216C RPN4Q03465 531 aa6.11□□□□□ -1.43
RRI1YDL216C YDL124WQ07551 312 aaKnown RBP6.11□□□□□ -1.43
RRI1YDL216C YER158CP40095 573 aa6.1□□□□□ -1.43
RRI1YDL216C LCD1Q04377 747 aa6.1□□□□□ -1.43
RRI1YDL216C FPR4Q06205 392 aaPredicted RBP6.1□□□□□ -1.43
RRI1YDL216C GAL10P04397 699 aa6.09□□□□□ -1.43
RRI1YDL216C RPS13P05756 151 aaKnown RBP6.09□□□□□ -1.43
RRI1YDL216C TOD6P34219 525 aa6.09□□□□□ -1.43
RRI1YDL216C RSP5P39940 809 aaKnown RBP6.09□□□□□ -1.43
RRI1YDL216C CHZ1P40019 153 aaPredicted RBP6.09□□□□□ -1.43
RRI1YDL216C CCM1P48237 864 aaPredicted RBP6.09□□□□□ -1.43
RRI1YDL216C PBP1P53297 722 aaKnown RBP6.09□□□□□ -1.43
RRI1YDL216C NPL3Q01560 414 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43 RIP-Chip
RRI1YDL216C TAF8Q03750 510 aa6.09□□□□□ -1.43
RRI1YDL216C VTS1Q08831 523 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
RRI1YDL216C HBN1Q96VH4 193 aa6.09□□□□□ -1.43
RRI1YDL216C CDC48P25694 835 aaKnown RBP6.08□□□□□ -1.44
RRI1YDL216C ECM21P38167 1117 aaKnown RBP6.08□□□□□ -1.44
RRI1YDL216C TSL1P38427 1098 aaKnown RBP6.08□□□□□ -1.44
RRI1YDL216C LAM1P38851 1228 aa6.08□□□□□ -1.44
RRI1YDL216C XYL2Q07993 356 aa6.08□□□□□ -1.44
RRI1YDL216C CAN1P04817 590 aa6.07□□□□□ -1.44
RRI1YDL216C SRM1P21827 482 aa6.07□□□□□ -1.44
RRI1YDL216C AFR1P33304 620 aa6.07□□□□□ -1.44
RRI1YDL216C PET10P36139 283 aa6.07□□□□□ -1.44
RRI1YDL216C YBR238CP38330 731 aaKnown RBP6.07□□□□□ -1.44
RRI1YDL216C NPP2P39997 493 aa6.07□□□□□ -1.44
RRI1YDL216C OSW7P43611 510 aa6.07□□□□□ -1.44
RRI1YDL216C YPR196WQ06595 470 aa6.07□□□□□ -1.44
RRI1YDL216C NPP1P25353 742 aa6.06□□□□□ -1.44
RRI1YDL216C YBR284WP38150 797 aa6.06□□□□□ -1.44
RRI1YDL216C ZRG8P40021 1076 aa6.06□□□□□ -1.44
RRI1YDL216C BUL2Q03758 920 aaKnown RBP6.06□□□□□ -1.44
RRI1YDL216C YPR071WQ12346 211 aa6.06□□□□□ -1.44
RRI1YDL216C RPP2AP05319 106 aaKnown RBP6.05□□□□□ -1.44
RRI1YDL216C DOM34P33309 386 aa6.05□□□□□ -1.44
RRI1YDL216C REC104P33323 182 aa6.05□□□□□ -1.44
RRI1YDL216C PBP2P38151 413 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
RRI1YDL216C MEF2P39677 819 aa6.05□□□□□ -1.44
RRI1YDL216C TOK1P40310 691 aa6.05□□□□□ -1.44
RRI1YDL216C SFB2P53953 876 aa6.05□□□□□ -1.44
RRI1YDL216C ROT1Q03691 256 aa6.05□□□□□ -1.44
RRI1YDL216C PPM2Q08282 695 aa6.05□□□□□ -1.44
RRI1YDL216C HSF1P10961 833 aa6.04□□□□□ -1.44
RRI1YDL216C ENA1P13587 1091 aa6.04□□□□□ -1.44
RRI1YDL216C MSD1P15179 658 aaKnown RBP6.04□□□□□ -1.44
RRI1YDL216C MND2P40577 368 aa6.04□□□□□ -1.44
RRI1YDL216C BUD6P41697 788 aa6.04□□□□□ -1.44
RRI1YDL216C UBP6P43593 499 aaKnown RBP6.04□□□□□ -1.44
RRI1YDL216C PSP2P50109 593 aaKnown RBP6.04□□□□□ -1.44
RRI1YDL216C YKE2P52553 114 aa6.04□□□□□ -1.44
RRI1YDL216C YGR012WP53206 393 aa6.04□□□□□ -1.44
RRI1YDL216C ENA2Q01896 1091 aa6.04□□□□□ -1.44
RRI1YDL216C GCN5Q03330 439 aa6.04□□□□□ -1.44
RRI1YDL216C PLB2Q03674 706 aa6.04□□□□□ -1.44
RRI1YDL216C ENA5Q12691 1091 aa6.04□□□□□ -1.44
RRI1YDL216C ORC1P54784 914 aaPredicted RBP6.03□□□□□ -1.44
RRI1YDL216C YDR132CQ03900 495 aa6.03□□□□□ -1.44
RRI1YDL216C CDA1Q06702 301 aa6.03□□□□□ -1.44
RRI1YDL216C TOM70P07213 617 aaKnown RBP6.02□□□□□ -1.45
RRI1YDL216C TOP3P13099 656 aa6.02□□□□□ -1.45
RRI1YDL216C SRP101P32916 621 aa6.02□□□□□ -1.45
RRI1YDL216C BET3P36149 193 aa6.02□□□□□ -1.45
RRI1YDL216C POA1P38218 177 aa6.02□□□□□ -1.45
RRI1YDL216C RXT3Q07458 294 aa6.02□□□□□ -1.45
RRI1YDL216C PRE10P21242 288 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
RRI1YDL216C ATG19P35193 415 aa6.01□□□□□ -1.45
RRI1YDL216C RTA1P53047 317 aa6.01□□□□□ -1.45
RRI1YDL216C DUS4Q06063 367 aa6.01□□□□□ -1.45
RRI1YDL216C GPB1Q08886 897 aa6.01□□□□□ -1.45
RRI1YDL216C YLR358CO13565 187 aa6□□□□□ -1.45
RRI1YDL216C ERT1P38140 529 aa6□□□□□ -1.45
RRI1YDL216C SPT20P50875 604 aa6□□□□□ -1.45
RRI1YDL216C RAI1P53063 387 aaKnown RBP6□□□□□ -1.45
RRI1YDL216C GTF1P53260 183 aaPredicted RBP6□□□□□ -1.45
RRI1YDL216C VPS30Q02948 557 aa6□□□□□ -1.45
RRI1YDL216C CLU1Q03690 1277 aaKnown RBP6□□□□□ -1.45
RRI1YDL216C TPO1Q07824 586 aa6□□□□□ -1.45
RRI1YDL216C YLR125WQ12138 136 aa6□□□□□ -1.45
RRI1YDL216C NOT3P06102 836 aaKnown RBP5.99□□□□□ -1.45
RRI1YDL216C SPE1P08432 466 aa5.99□□□□□ -1.45
RRI1YDL216C RFA1P22336 621 aaKnown RBP5.99□□□□□ -1.45
RRI1YDL216C TIM23P32897 222 aa5.99□□□□□ -1.45
RRI1YDL216C NUP82P40368 713 aa5.99□□□□□ -1.45
RRI1YDL216C NIT3P49954 291 aa5.99□□□□□ -1.45
RRI1YDL216C ACK1Q07622 623 aaPredicted RBP5.99□□□□□ -1.45
RRI1YDL216C ADY3Q07732 790 aa5.99□□□□□ -1.45
RRI1YDL216C CIT2P08679 460 aa5.99□□□□□ -1.45
RRI1YDL216C CDC6P09119 513 aa5.99□□□□□ -1.45
RRI1YDL216C ALG2P43636 503 aa5.99□□□□□ -1.45
RRI1YDL216C MET12P46151 657 aa5.99□□□□□ -1.45
RRI1YDL216C VPS62P53285 467 aa5.99□□□□□ -1.45
RRI1YDL216C HMI1Q12039 706 aa5.99□□□□□ -1.45
RRI1YDL216C MPH2P0CD99 609 aa5.98□□□□□ -1.45
RRI1YDL216C NOP12Q08208 459 aaKnown RBP5.98□□□□□ -1.45
RRI1YDL216C ENV7Q12003 364 aa5.98□□□□□ -1.45
RRI1YDL216C ERR1P0CX10 437 aa5.97□□□□□ -1.45
RRI1YDL216C ERR2P0CX11 437 aa5.97□□□□□ -1.45
RRI1YDL216C PHO8P11491 566 aa5.97□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 60.8 ms