RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C AFT1P22149 690 aa2.29□□□□□ -2.04
BRE1YDL074C RAD53P22216 821 aa2.29□□□□□ -2.04
BRE1YDL074C CHS3P29465 1165 aa2.29□□□□□ -2.04
BRE1YDL074C GLC3P32775 704 aa2.29□□□□□ -2.04
BRE1YDL074C NIP100P33420 868 aa2.29□□□□□ -2.04
BRE1YDL074C STO1P34160 861 aaKnown RBP2.29□□□□□ -2.04
BRE1YDL074C SQT1P35184 431 aa2.29□□□□□ -2.04
BRE1YDL074C UBP13P38187 747 aa2.29□□□□□ -2.04
BRE1YDL074C SUL1P38359 859 aa2.29□□□□□ -2.04
BRE1YDL074C PAN5P38787 379 aa2.29□□□□□ -2.04
BRE1YDL074C GAA1P39012 614 aa2.29□□□□□ -2.04
BRE1YDL074C CIN4P39110 191 aa2.29□□□□□ -2.04
BRE1YDL074C YMR124WP39523 943 aaKnown RBP2.29□□□□□ -2.04
BRE1YDL074C VAB2P40003 282 aa2.29□□□□□ -2.04
BRE1YDL074C VFA1P40080 203 aa2.29□□□□□ -2.04
BRE1YDL074C PSY2P40164 858 aa2.29□□□□□ -2.04
BRE1YDL074C NIT1P40447 199 aa2.29□□□□□ -2.04
BRE1YDL074C SHQ1P40486 507 aaPredicted RBP2.29□□□□□ -2.04
BRE1YDL074C LYS14P40971 790 aa2.29□□□□□ -2.04
BRE1YDL074C PXA1P41909 870 aa2.29□□□□□ -2.04
BRE1YDL074C EMP47P43555 445 aa2.29□□□□□ -2.04
BRE1YDL074C YGR035CP53222 116 aa2.29□□□□□ -2.04
BRE1YDL074C ERG5P54781 538 aa2.29□□□□□ -2.04
BRE1YDL074C ERV41Q04651 352 aa2.29□□□□□ -2.04
BRE1YDL074C PHM6Q05637 104 aa2.29□□□□□ -2.04
BRE1YDL074C ATG20Q07528 640 aa2.29□□□□□ -2.04
BRE1YDL074C RLP24Q07915 199 aaKnown RBP2.29□□□□□ -2.04
BRE1YDL074C YRR1Q12172 810 aa2.29□□□□□ -2.04
BRE1YDL074C RIO1Q12196 484 aaKnown RBP2.29□□□□□ -2.04
BRE1YDL074C RUD3Q12234 484 aaKnown RBP2.29□□□□□ -2.04
BRE1YDL074C TY1A-DR4O74302 440 aa2.29□□□□□ -2.04
BRE1YDL074C PGK1P00560 416 aaKnown RBP2.29□□□□□ -2.04
BRE1YDL074C ILV1P00927 576 aaKnown RBP2.29□□□□□ -2.04
BRE1YDL074C SNF1P06782 633 aaKnown RBP2.29□□□□□ -2.04
BRE1YDL074C SRD1P09007 221 aa2.29□□□□□ -2.04
BRE1YDL074C TY1A-HP0C2I4 478 aaKnown RBP2.29□□□□□ -2.04
BRE1YDL074C TY1A-AP0CX57 440 aa2.29□□□□□ -2.04
BRE1YDL074C TY1A-PR1P0CX58 440 aa2.29□□□□□ -2.04
BRE1YDL074C TY1A-ORP0CX59 440 aa2.29□□□□□ -2.04
BRE1YDL074C TY1A-PR2P0CX60 440 aa2.29□□□□□ -2.04
BRE1YDL074C TY1A-DR5P0CX65 440 aa2.29□□□□□ -2.04
BRE1YDL074C TY1A-ER2P0CX66 440 aa2.29□□□□□ -2.04
BRE1YDL074C TY1A-GR3P0CX67 440 aa2.29□□□□□ -2.04
BRE1YDL074C TY1A-LR1P0CX68 440 aa2.29□□□□□ -2.04
BRE1YDL074C TY1A-MR2P0CX69 440 aa2.29□□□□□ -2.04
BRE1YDL074C PHO8P11491 566 aa2.29□□□□□ -2.04
BRE1YDL074C ACE2P21192 770 aa2.29□□□□□ -2.04
BRE1YDL074C CLB5P30283 435 aa2.29□□□□□ -2.04
BRE1YDL074C PSO2P30620 661 aa2.29□□□□□ -2.04
BRE1YDL074C KTR2P33550 425 aa2.29□□□□□ -2.04
BRE1YDL074C PET10P36139 283 aa2.29□□□□□ -2.04
BRE1YDL074C PXL1P36166 706 aa2.29□□□□□ -2.04
BRE1YDL074C SIP3P38717 1229 aa2.29□□□□□ -2.04
BRE1YDL074C TDA3P38758 523 aa2.29□□□□□ -2.04
BRE1YDL074C SAK1P38990 1142 aa2.29□□□□□ -2.04
BRE1YDL074C HMF1P40037 129 aaKnown RBP2.29□□□□□ -2.04
BRE1YDL074C SDS3P40505 327 aa2.29□□□□□ -2.04
BRE1YDL074C CIT3P43635 486 aa2.29□□□□□ -2.04
BRE1YDL074C AIP1P46680 615 aaKnown RBP2.29□□□□□ -2.04
BRE1YDL074C TY1A-JR2P47099 440 aa2.29□□□□□ -2.04
BRE1YDL074C EAF6P47128 113 aa2.29□□□□□ -2.04
BRE1YDL074C CCM1P48237 864 aaPredicted RBP2.29□□□□□ -2.04
BRE1YDL074C PRP31P49704 494 aaPredicted RBP2.29□□□□□ -2.04
BRE1YDL074C FMS1P50264 508 aa2.29□□□□□ -2.04
BRE1YDL074C VPS4P52917 437 aa2.29□□□□□ -2.04
BRE1YDL074C LIF1P53150 421 aa2.29□□□□□ -2.04
BRE1YDL074C ZPR1P53303 486 aaKnown RBP2.29□□□□□ -2.04
BRE1YDL074C JJJ1P53863 590 aa2.29□□□□□ -2.04
BRE1YDL074C TRM44Q02648 567 aaKnown RBP2.29□□□□□ -2.04
BRE1YDL074C EEB1Q02891 456 aa2.29□□□□□ -2.04
BRE1YDL074C TY1A-DR1Q03856 440 aa2.29□□□□□ -2.04
BRE1YDL074C TY1A-ML1Q04706 440 aaKnown RBP2.29□□□□□ -2.04
BRE1YDL074C OMS1Q06668 471 aa2.29□□□□□ -2.04
BRE1YDL074C GUD1Q07729 489 aa2.29□□□□□ -2.04
BRE1YDL074C LAP2Q10740 671 aa2.29□□□□□ -2.04
BRE1YDL074C APL4Q12028 832 aa2.29□□□□□ -2.04
BRE1YDL074C NUR1Q12066 484 aa2.29□□□□□ -2.04
BRE1YDL074C TY1A-BRQ12217 440 aa2.29□□□□□ -2.04
BRE1YDL074C TY1A-NL2Q12470 440 aa2.29□□□□□ -2.04
BRE1YDL074C TY1A-GR2Q12485 440 aa2.29□□□□□ -2.04
BRE1YDL074C RPB2P08518 1224 aaKnown RBP2.28□□□□□ -2.04
BRE1YDL074C RPS6AP0CX37 236 aaKnown RBP2.28□□□□□ -2.04
BRE1YDL074C RPS6BP0CX38 236 aaPredicted RBP2.28□□□□□ -2.04
BRE1YDL074C CLN3P13365 580 aa2.28□□□□□ -2.04
BRE1YDL074C PFK1P16861 987 aaKnown RBP2.28□□□□□ -2.04
BRE1YDL074C SEC2P17065 759 aa2.28□□□□□ -2.04
BRE1YDL074C ISY1P21374 235 aaPredicted RBP2.28□□□□□ -2.04
BRE1YDL074C RRP43P25359 394 aaPredicted RBP2.28□□□□□ -2.04
BRE1YDL074C SEC21P32074 935 aaKnown RBP2.28□□□□□ -2.04
BRE1YDL074C HXT1P32465 570 aa2.28□□□□□ -2.04
BRE1YDL074C SEC8P32855 1065 aa2.28□□□□□ -2.04
BRE1YDL074C ATG19P35193 415 aa2.28□□□□□ -2.04
BRE1YDL074C OCT1P35999 772 aa2.28□□□□□ -2.04
BRE1YDL074C JNM1P36224 373 aa2.28□□□□□ -2.04
BRE1YDL074C PPS1P38148 807 aa2.28□□□□□ -2.04
BRE1YDL074C ORC6P38826 435 aa2.28□□□□□ -2.04
BRE1YDL074C TIF4631P39935 952 aaKnown RBP2.28□□□□□ -2.04
BRE1YDL074C ACA1P39970 489 aa2.28□□□□□ -2.04
BRE1YDL074C RPN3P40016 523 aaKnown RBP2.28□□□□□ -2.04
BRE1YDL074C ATG3P40344 310 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 55.3 ms