RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	UPC2	Q12151	913 aa		3.72	□□□□□ -1.81
HMRA2	YCR096C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.72	□□□□□ -1.81	not detected
HMRA2	YCR096C	SUT2	Q12286	268 aa		3.72	□□□□□ -1.81
HMRA2	YCR096C	ATG19	P35193	415 aa		3.71	□□□□□ -1.82
HMRA2	YCR096C	SSF1	P38789	453 aa	Predicted RBP	3.71	□□□□□ -1.82
HMRA2	YCR096C	STM1	P39015	273 aa	Known RBP	3.71	□□□□□ -1.82
HMRA2	YCR096C	HRQ1	Q05549	1077 aa		3.71	□□□□□ -1.82
HMRA2	YCR096C	GIC1	P38785	314 aa		3.7	□□□□□ -1.82
HMRA2	YCR096C	SDS3	P40505	327 aa		3.7	□□□□□ -1.82
HMRA2	YCR096C	ERG5	P54781	538 aa		3.7	□□□□□ -1.82
HMRA2	YCR096C	SRT1	Q03175	343 aa		3.7	□□□□□ -1.82
HMRA2	YCR096C	BNR1	P40450	1375 aa		3.7	□□□□□ -1.82
HMRA2	YCR096C	SLU7	Q02775	382 aa	Known RBP	3.69	□□□□□ -1.82
HMRA2	YCR096C	MRH1	Q12117	320 aa	Predicted RBP	3.69	□□□□□ -1.82
HMRA2	YCR096C	YPL066W	Q12194	479 aa		3.69	□□□□□ -1.82
HMRA2	YCR096C	STE14	P32584	239 aa		3.68	□□□□□ -1.82
HMRA2	YCR096C	YAP7	Q08182	245 aa		3.68	□□□□□ -1.82
HMRA2	YCR096C	YLL058W	Q12198	575 aa		3.68	□□□□□ -1.82
HMRA2	YCR096C	ICT1	Q12385	394 aa		3.68	□□□□□ -1.82
HMRA2	YCR096C	RAD27	P26793	382 aa		3.67	□□□□□ -1.82
HMRA2	YCR096C	MCM2	P29469	868 aa		3.67	□□□□□ -1.82
HMRA2	YCR096C	FUN30	P31380	1131 aa		3.67	□□□□□ -1.82
HMRA2	YCR096C	NPP2	P39997	493 aa		3.67	□□□□□ -1.82
HMRA2	YCR096C	MOT2	P34909	587 aa	Known RBP	3.66	□□□□□ -1.82
HMRA2	YCR096C	HOF1	Q05080	669 aa		3.66	□□□□□ -1.82
HMRA2	YCR096C	HBT1	Q07653	1046 aa	Known RBP	3.66	□□□□□ -1.82
HMRA2	YCR096C	PPZ2	P33329	710 aa		3.65	□□□□□ -1.83
HMRA2	YCR096C	PPS1	P38148	807 aa		3.65	□□□□□ -1.83
HMRA2	YCR096C	IMO32	P53219	342 aa		3.65	□□□□□ -1.83
HMRA2	YCR096C	RTT10	Q08924	1013 aa		3.65	□□□□□ -1.83
HMRA2	YCR096C	INO1	P11986	533 aa		3.64	□□□□□ -1.83
HMRA2	YCR096C	FLO10	P36170	1169 aa		3.64	□□□□□ -1.83
HMRA2	YCR096C	TDP1	P38319	544 aa		3.64	□□□□□ -1.83
HMRA2	YCR096C	RIX1	P38883	763 aa	Predicted RBP	3.64	□□□□□ -1.83
HMRA2	YCR096C	IPL1	P38991	367 aa		3.64	□□□□□ -1.83
HMRA2	YCR096C	SFB2	P53953	876 aa		3.64	□□□□□ -1.83
HMRA2	YCR096C	COQ11	Q05892	277 aa		3.64	□□□□□ -1.83
HMRA2	YCR096C	TRP2	P00899	507 aa	Known RBP	3.63	□□□□□ -1.83
HMRA2	YCR096C	SED4	P25365	1065 aa		3.63	□□□□□ -1.83
HMRA2	YCR096C	YGL176C	P46945	554 aa		3.63	□□□□□ -1.83
HMRA2	YCR096C	LYP1	P32487	611 aa		3.62	□□□□□ -1.83
HMRA2	YCR096C	TMT1	P32643	299 aa		3.62	□□□□□ -1.83
HMRA2	YCR096C	YHL017W	P38745	532 aa		3.62	□□□□□ -1.83
HMRA2	YCR096C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	3.62	□□□□□ -1.83	not detected
HMRA2	YCR096C	FRE5	Q08908	694 aa		3.62	□□□□□ -1.83
HMRA2	YCR096C	YNL162W-A	Q3E7A8	72 aa		3.62	□□□□□ -1.83
HMRA2	YCR096C	TUB1	P09733	447 aa	Known RBP	3.61	□□□□□ -1.83
HMRA2	YCR096C	SEC20	P28791	383 aa		3.61	□□□□□ -1.83
HMRA2	YCR096C	SPR28	Q04921	423 aa		3.61	□□□□□ -1.83
HMRA2	YCR096C	RKM4	Q12504	494 aa		3.61	□□□□□ -1.83
HMRA2	YCR096C	SAH1	P39954	449 aa	Known RBP	3.6	□□□□□ -1.83
HMRA2	YCR096C	TAH11	P47112	604 aa		3.6	□□□□□ -1.83
HMRA2	YCR096C	EEB1	Q02891	456 aa		3.6	□□□□□ -1.83
HMRA2	YCR096C	TMA46	Q12000	345 aa	Known RBP	3.6	□□□□□ -1.83
HMRA2	YCR096C	GFA1	P14742	717 aa	Known RBP	3.59	□□□□□ -1.83
HMRA2	YCR096C	SEC21	P32074	935 aa	Known RBP	3.59	□□□□□ -1.83
HMRA2	YCR096C	DUT1	P33317	147 aa		3.59	□□□□□ -1.83
HMRA2	YCR096C	YKL107W	P34251	309 aa		3.59	□□□□□ -1.83
HMRA2	YCR096C	VPS73	P53142	486 aa	Known RBP	3.59	□□□□□ -1.83
HMRA2	YCR096C	THI7	Q05998	598 aa		3.59	□□□□□ -1.83
HMRA2	YCR096C	PEX19	Q07418	342 aa		3.59	□□□□□ -1.83
HMRA2	YCR096C	DAS1	P47005	663 aa		3.58	□□□□□ -1.84
HMRA2	YCR096C	TYW3	P53177	273 aa		3.58	□□□□□ -1.84
HMRA2	YCR096C	CTF13	P35203	478 aa		3.57	□□□□□ -1.84
HMRA2	YCR096C	ELO3	P40319	345 aa		3.57	□□□□□ -1.84
HMRA2	YCR096C	RAI1	P53063	387 aa	Known RBP	3.57	□□□□□ -1.84
HMRA2	YCR096C	ADY4	Q05955	493 aa		3.57	□□□□□ -1.84
HMRA2	YCR096C	RPC82	P32349	654 aa		3.56	□□□□□ -1.84
HMRA2	YCR096C	FYV10	P40492	516 aa		3.56	□□□□□ -1.84
HMRA2	YCR096C	DLT1	Q04216	342 aa		3.56	□□□□□ -1.84
HMRA2	YCR096C	SSL1	Q04673	461 aa	Predicted RBP	3.56	□□□□□ -1.84
HMRA2	YCR096C	YLR225C	Q05948	407 aa	Known RBP	3.56	□□□□□ -1.84
HMRA2	YCR096C	MET6	P05694	767 aa	Known RBP	3.55	□□□□□ -1.84
HMRA2	YCR096C	MET3	P08536	511 aa		3.55	□□□□□ -1.84
HMRA2	YCR096C	CDC12	P32468	407 aa	Known RBP	3.55	□□□□□ -1.84
HMRA2	YCR096C	GLO1	P50107	326 aa		3.55	□□□□□ -1.84
HMRA2	YCR096C	ESF1	Q06344	628 aa	Known RBP	3.55	□□□□□ -1.84
HMRA2	YCR096C	ARO10	Q06408	635 aa		3.55	□□□□□ -1.84
HMRA2	YCR096C	TUB3	P09734	445 aa	Known RBP	3.54	□□□□□ -1.84
HMRA2	YCR096C	HCA4	P20448	770 aa	Known RBP	3.54	□□□□□ -1.84
HMRA2	YCR096C	YPR196W	Q06595	470 aa		3.54	□□□□□ -1.84
HMRA2	YCR096C	FBP1	P09201	348 aa		3.53	□□□□□ -1.84
HMRA2	YCR096C	ILV6	P25605	309 aa	Known RBP	3.53	□□□□□ -1.84
HMRA2	YCR096C	MGE1	P38523	228 aa		3.53	□□□□□ -1.84
HMRA2	YCR096C	GYP7	P48365	746 aa		3.53	□□□□□ -1.84
HMRA2	YCR096C	SEC5	P89102	971 aa		3.53	□□□□□ -1.84
HMRA2	YCR096C	ESC2	Q06340	456 aa		3.53	□□□□□ -1.84
HMRA2	YCR096C	TRM11	Q12463	433 aa		3.53	□□□□□ -1.84
HMRA2	YCR096C	NOT3	P06102	836 aa	Known RBP	3.52	□□□□□ -1.85
HMRA2	YCR096C	CAF20	P12962	161 aa	Known RBP	3.52	□□□□□ -1.85
HMRA2	YCR096C	ATE1	P16639	503 aa		3.52	□□□□□ -1.85
HMRA2	YCR096C	PCL5	P38794	229 aa		3.52	□□□□□ -1.85
HMRA2	YCR096C	SDP1	P40479	209 aa		3.52	□□□□□ -1.85
HMRA2	YCR096C	YJR107W	P47145	328 aa		3.52	□□□□□ -1.85
HMRA2	YCR096C	MRPS35	P53292	345 aa		3.52	□□□□□ -1.85
HMRA2	YCR096C	SEN54	Q02825	467 aa	Predicted RBP	3.52	□□□□□ -1.85
HMRA2	YCR096C	CDC43	P18898	376 aa		3.51	□□□□□ -1.85
HMRA2	YCR096C	ADY2	P25613	283 aa		3.51	□□□□□ -1.85
HMRA2	YCR096C	TSL1	P38427	1098 aa	Known RBP	3.51	□□□□□ -1.85
HMRA2	YCR096C	FKH2	P41813	862 aa		3.51	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms