RNA–Protein interactions for RNA: YCR028C

FEN2, Transcript of Plasma membrane H+-pantothenate symporter, yeast

Gene FEN2, Length 1,539 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FEN2	YCR028C	YEL1	P34225	687 aa		11.78	□□□□□ -0.52
FEN2	YCR028C	UBP5	P39944	805 aa		11.78	□□□□□ -0.52
FEN2	YCR028C	CCM1	P48237	864 aa	Predicted RBP	11.78	□□□□□ -0.52
FEN2	YCR028C	ROD1	Q02805	837 aa		11.78	□□□□□ -0.52
FEN2	YCR028C	GPI13	Q07830	1017 aa		11.78	□□□□□ -0.52
FEN2	YCR028C	YLL058W	Q12198	575 aa		11.78	□□□□□ -0.52
FEN2	YCR028C	DED1	P06634	604 aa	Known RBP	11.77	□□□□□ -0.52
FEN2	YCR028C	RTT107	P38850	1070 aa		11.77	□□□□□ -0.52
FEN2	YCR028C	MDR1	P53258	950 aa		11.77	□□□□□ -0.52
FEN2	YCR028C	DUS1	P53759	423 aa	Known RBP	11.77	□□□□□ -0.52
FEN2	YCR028C	NOC3	Q07896	663 aa	Predicted RBP	11.77	□□□□□ -0.52
FEN2	YCR028C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	11.76	□□□□□ -0.53	not detected
FEN2	YCR028C	PHO8	P11491	566 aa		11.76	□□□□□ -0.53
FEN2	YCR028C	YSC83	P32792	385 aa		11.76	□□□□□ -0.53
FEN2	YCR028C	ERC1	P38767	581 aa		11.76	□□□□□ -0.53
FEN2	YCR028C	CAF130	P53280	1122 aa	Predicted RBP	11.76	□□□□□ -0.53
FEN2	YCR028C	NAM7	P30771	971 aa	Known RBP	11.76	□□□□□ -0.53
FEN2	YCR028C	COT1	P32798	439 aa		11.76	□□□□□ -0.53
FEN2	YCR028C	TIM23	P32897	222 aa		11.76	□□□□□ -0.53
FEN2	YCR028C	LEO1	P38439	464 aa		11.76	□□□□□ -0.53
FEN2	YCR028C	AVT1	P47082	602 aa		11.76	□□□□□ -0.53
FEN2	YCR028C	COQ9	Q05779	260 aa		11.76	□□□□□ -0.53
FEN2	YCR028C	CWC2	Q12046	339 aa	Predicted RBP	11.76	□□□□□ -0.53
FEN2	YCR028C	POX1	P13711	748 aa		11.75	□□□□□ -0.53
FEN2	YCR028C	APL1	P27351	700 aa		11.75	□□□□□ -0.53
FEN2	YCR028C	RME1	P32338	300 aa	Known RBP	11.75	□□□□□ -0.53
FEN2	YCR028C	SPC110	P32380	944 aa		11.75	□□□□□ -0.53
FEN2	YCR028C	VPS35	P34110	944 aa		11.75	□□□□□ -0.53
FEN2	YCR028C	MNR2	P35724	969 aa		11.75	□□□□□ -0.53
FEN2	YCR028C	ATG9	Q12142	997 aa		11.75	□□□□□ -0.53
FEN2	YCR028C	IRE1	P32361	1115 aa		11.74	□□□□□ -0.53
FEN2	YCR028C	MFT1	P33441	392 aa	Known RBP	11.74	□□□□□ -0.53
FEN2	YCR028C	EFM2	P38347	419 aa		11.74	□□□□□ -0.53
FEN2	YCR028C	HFM1	P51979	1187 aa		11.74	□□□□□ -0.53
FEN2	YCR028C	YLR287C	Q05881	355 aa		11.74	□□□□□ -0.53
FEN2	YCR028C	APL4	Q12028	832 aa		11.74	□□□□□ -0.53
FEN2	YCR028C	SSB1	P11484	613 aa	Known RBP	11.73	□□□□□ -0.53
FEN2	YCR028C	KIN82	P25341	720 aa		11.73	□□□□□ -0.53
FEN2	YCR028C	MNN4	P36044	1178 aa		11.73	□□□□□ -0.53
FEN2	YCR028C	FLR1	P38124	548 aa		11.73	□□□□□ -0.53
FEN2	YCR028C	EAF5	P39995	279 aa		11.73	□□□□□ -0.53
FEN2	YCR028C	SSB2	P40150	613 aa	Known RBP	11.73	□□□□□ -0.53
FEN2	YCR028C	LCB2	P40970	561 aa		11.73	□□□□□ -0.53
FEN2	YCR028C	PSP2	P50109	593 aa	Known RBP	11.73	□□□□□ -0.53
FEN2	YCR028C	TAM41	P53230	385 aa		11.73	□□□□□ -0.53
FEN2	YCR028C	GIR2	Q03768	265 aa	Predicted RBP	11.73	□□□□□ -0.53
FEN2	YCR028C	YCG1	Q06680	1035 aa		11.73	□□□□□ -0.53
FEN2	YCR028C	FAL1	Q12099	399 aa	Known RBP	11.73	□□□□□ -0.53
FEN2	YCR028C	VFA1	P40080	203 aa		11.72	□□□□□ -0.53
FEN2	YCR028C	NCS6	P53088	359 aa		11.72	□□□□□ -0.53
FEN2	YCR028C	RTT102	P53330	157 aa		11.72	□□□□□ -0.53
FEN2	YCR028C	IES4	Q08561	116 aa		11.72	□□□□□ -0.53
FEN2	YCR028C	PLP2	Q12017	286 aa		11.72	□□□□□ -0.53
FEN2	YCR028C	ICL2	Q12031	575 aa		11.72	□□□□□ -0.53
FEN2	YCR028C	RRP6	Q12149	733 aa	Known RBP	11.72	□□□□□ -0.53
FEN2	YCR028C	MAS2	P11914	482 aa		11.71	□□□□□ -0.53
FEN2	YCR028C	UBC1	P21734	215 aa	Known RBP	11.71	□□□□□ -0.53
FEN2	YCR028C	EFT1	P32324	842 aa	Known RBP	11.71	□□□□□ -0.53
FEN2	YCR028C	CTR9	P89105	1077 aa		11.71	□□□□□ -0.53
FEN2	YCR028C	HMI1	Q12039	706 aa		11.71	□□□□□ -0.53
FEN2	YCR028C	OSW2	Q12202	724 aa		11.71	□□□□□ -0.53
FEN2	YCR028C	SWI6	P09959	803 aa		11.7	□□□□□ -0.54
FEN2	YCR028C	CHS2	P14180	963 aa		11.7	□□□□□ -0.54
FEN2	YCR028C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	11.7	□□□□□ -0.54	not detected
FEN2	YCR028C	DBP1	P24784	617 aa	Known RBP	11.7	□□□□□ -0.54
FEN2	YCR028C	KSP1	P38691	1029 aa	Known RBP	11.7	□□□□□ -0.54
FEN2	YCR028C	PSF2	P40359	213 aa		11.7	□□□□□ -0.54
FEN2	YCR028C	UME1	Q03010	460 aa		11.7	□□□□□ -0.54
FEN2	YCR028C	RLP24	Q07915	199 aa	Known RBP	11.7	□□□□□ -0.54
FEN2	YCR028C	MLH2	Q07980	695 aa		11.7	□□□□□ -0.54
FEN2	YCR028C	PCH2	P38126	564 aa		11.7	□□□□□ -0.54
FEN2	YCR028C	ACF4	P47129	309 aa		11.7	□□□□□ -0.54
FEN2	YCR028C	KTR2	P33550	425 aa		11.69	□□□□□ -0.54
FEN2	YCR028C	FIG4	P42837	879 aa		11.69	□□□□□ -0.54
FEN2	YCR028C	SKP2	P42843	763 aa		11.69	□□□□□ -0.54
FEN2	YCR028C	OSW7	P43611	510 aa		11.69	□□□□□ -0.54
FEN2	YCR028C	BRE5	P53741	515 aa	Known RBP	11.69	□□□□□ -0.54
FEN2	YCR028C	YNL146W	P53906	100 aa		11.69	□□□□□ -0.54
FEN2	YCR028C	TIM8	P57744	87 aa		11.69	□□□□□ -0.54
FEN2	YCR028C	VTC3	Q02725	835 aa		11.69	□□□□□ -0.54
FEN2	YCR028C	ESC2	Q06340	456 aa		11.69	□□□□□ -0.54
FEN2	YCR028C	CDC53	Q12018	815 aa	Known RBP	11.69	□□□□□ -0.54
FEN2	YCR028C	SPO12	P17123	173 aa		11.68	□□□□□ -0.54
FEN2	YCR028C	RRP43	P25359	394 aa	Predicted RBP	11.68	□□□□□ -0.54
FEN2	YCR028C	BCS1	P32839	456 aa		11.68	□□□□□ -0.54
FEN2	YCR028C	SMY2	P32909	740 aa	Known RBP	11.68	□□□□□ -0.54
FEN2	YCR028C	GPT2	P36148	743 aa		11.68	□□□□□ -0.54
FEN2	YCR028C	YAP5	P40574	245 aa		11.68	□□□□□ -0.54
FEN2	YCR028C	STU2	P46675	888 aa		11.68	□□□□□ -0.54
FEN2	YCR028C	COS5	P47187	383 aa		11.68	□□□□□ -0.54
FEN2	YCR028C	MSC2	Q03455	724 aa		11.68	□□□□□ -0.54
FEN2	YCR028C	DON1	Q05610	365 aa		11.68	□□□□□ -0.54
FEN2	YCR028C	VPS38	Q05919	439 aa		11.68	□□□□□ -0.54
FEN2	YCR028C	MUD1	P32605	298 aa	Known RBP	11.67	□□□□□ -0.54
FEN2	YCR028C	YKL023W	P36103	277 aa	Known RBP	11.67	□□□□□ -0.54
FEN2	YCR028C	GUA1	P38625	525 aa	Known RBP	11.67	□□□□□ -0.54
FEN2	YCR028C	YJR107W	P47145	328 aa		11.67	□□□□□ -0.54
FEN2	YCR028C	ALF1	P53904	254 aa		11.67	□□□□□ -0.54
FEN2	YCR028C	YML020W	Q03722	664 aa		11.67	□□□□□ -0.54
FEN2	YCR028C	UTP14	Q04500	899 aa	Known RBP	11.67	□□□□□ -0.54

Retrieved 100 of 5,963 RNA–protein pairs in 141.5 ms