RNA–Protein interactions for RNA: YCR001W

YCR001W, Transcript of Dubious open reading frame, yeast

Gene YCR001W, Length 315 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCR001W	YCR001W	GDE1	Q02979	1223 aa		4.97	□□□□□ -1.61
YCR001W	YCR001W	AIM39	Q08223	395 aa		4.96	□□□□□ -1.62
YCR001W	YCR001W	HRR25	P29295	494 aa	Known RBP	4.95	□□□□□ -1.62
YCR001W	YCR001W	MBP1	P39678	833 aa		4.95	□□□□□ -1.62
YCR001W	YCR001W	NPP2	P39997	493 aa		4.95	□□□□□ -1.62
YCR001W	YCR001W	SRP1	Q02821	542 aa	Known RBP	4.95	□□□□□ -1.62
YCR001W	YCR001W	KRI1	P42846	591 aa	Known RBP	4.94	□□□□□ -1.62
YCR001W	YCR001W	SFB2	P53953	876 aa		4.94	□□□□□ -1.62
YCR001W	YCR001W	FAL1	Q12099	399 aa	Known RBP	4.94	□□□□□ -1.62
YCR001W	YCR001W	NPC2	Q12408	173 aa		4.94	□□□□□ -1.62
YCR001W	YCR001W	ATG19	P35193	415 aa		4.93	□□□□□ -1.62
YCR001W	YCR001W	URM1	P40554	99 aa	Predicted RBP	4.93	□□□□□ -1.62
YCR001W	YCR001W	NCS6	P53088	359 aa		4.93	□□□□□ -1.62
YCR001W	YCR001W	CWC24	P53769	259 aa		4.93	□□□□□ -1.62
YCR001W	YCR001W	WHI4	Q07655	649 aa	Known RBP	4.93	□□□□□ -1.62
YCR001W	YCR001W	CLN2	P20438	545 aa		4.92	□□□□□ -1.62
YCR001W	YCR001W	RAD53	P22216	821 aa		4.92	□□□□□ -1.62
YCR001W	YCR001W	AGP1	P25376	633 aa		4.92	□□□□□ -1.62
YCR001W	YCR001W	SBA1	P28707	216 aa	Known RBP	4.92	□□□□□ -1.62
YCR001W	YCR001W	CDC12	P32468	407 aa	Known RBP	4.92	□□□□□ -1.62
YCR001W	YCR001W	DUS3	Q06053	668 aa	Known RBP	4.92	□□□□□ -1.62
YCR001W	YCR001W	ENB1	Q08299	606 aa		4.92	□□□□□ -1.62
YCR001W	YCR001W	MAD1	P40957	749 aa		4.91	□□□□□ -1.62
YCR001W	YCR001W	CAD1	P24813	409 aa	Known RBP	4.9	□□□□□ -1.63
YCR001W	YCR001W	KAR4	P25583	335 aa		4.9	□□□□□ -1.63
YCR001W	YCR001W	RPC82	P32349	654 aa		4.9	□□□□□ -1.63
YCR001W	YCR001W	YPR196W	Q06595	470 aa		4.9	□□□□□ -1.63
YCR001W	YCR001W	LAS17	Q12446	633 aa		4.9	□□□□□ -1.63
YCR001W	YCR001W	VBA5	P36172	582 aa		4.89	□□□□□ -1.63
YCR001W	YCR001W	GYP7	P48365	746 aa		4.89	□□□□□ -1.63
YCR001W	YCR001W	NAP1	P25293	417 aa	Known RBP	4.88	□□□□□ -1.63
YCR001W	YCR001W	YER158C	P40095	573 aa		4.88	□□□□□ -1.63
YCR001W	YCR001W	VPS16	Q03308	798 aa		4.88	□□□□□ -1.63
YCR001W	YCR001W	PPM2	Q08282	695 aa		4.88	□□□□□ -1.63
YCR001W	YCR001W	GUP2	Q08929	609 aa		4.88	□□□□□ -1.63
YCR001W	YCR001W	PIN2	Q12057	282 aa		4.88	□□□□□ -1.63
YCR001W	YCR001W	UPC2	Q12151	913 aa		4.88	□□□□□ -1.63
YCR001W	YCR001W	PRI2	P20457	528 aa		4.87	□□□□□ -1.63
YCR001W	YCR001W	EFT1	P32324	842 aa	Known RBP	4.87	□□□□□ -1.63
YCR001W	YCR001W	OAR1	P35731	278 aa		4.87	□□□□□ -1.63
YCR001W	YCR001W	MOH1	P38191	138 aa		4.87	□□□□□ -1.63
YCR001W	YCR001W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
YCR001W	YCR001W	RAI1	P53063	387 aa	Known RBP	4.87	□□□□□ -1.63
YCR001W	YCR001W	SHE9	Q04172	456 aa		4.87	□□□□□ -1.63
YCR001W	YCR001W	YDR306C	Q06640	478 aa		4.87	□□□□□ -1.63
YCR001W	YCR001W	OPI10	Q08202	246 aa		4.87	□□□□□ -1.63
YCR001W	YCR001W	SED4	P25365	1065 aa		4.86	□□□□□ -1.63
YCR001W	YCR001W	PPH3	P32345	308 aa		4.86	□□□□□ -1.63
YCR001W	YCR001W	TSL1	P38427	1098 aa	Known RBP	4.86	□□□□□ -1.63
YCR001W	YCR001W	JIP5	Q06214	492 aa	Predicted RBP	4.86	□□□□□ -1.63
YCR001W	YCR001W	YLR040C	Q07988	224 aa		4.86	□□□□□ -1.63
YCR001W	YCR001W	YKL069W	P36088	180 aa		4.85	□□□□□ -1.63
YCR001W	YCR001W	YKR078W	P36158	585 aa	Known RBP	4.85	□□□□□ -1.63
YCR001W	YCR001W	SUL1	P38359	859 aa		4.85	□□□□□ -1.63
YCR001W	YCR001W	BUL1	P48524	976 aa		4.85	□□□□□ -1.63
YCR001W	YCR001W	NOT3	P06102	836 aa	Known RBP	4.84	□□□□□ -1.63
YCR001W	YCR001W	CDC48	P25694	835 aa	Known RBP	4.84	□□□□□ -1.63
YCR001W	YCR001W	UBA2	P52488	636 aa		4.84	□□□□□ -1.63
YCR001W	YCR001W	YOL073C	Q08232	322 aa		4.84	□□□□□ -1.63
YCR001W	YCR001W	ADE8	P04161	214 aa		4.83	□□□□□ -1.64
YCR001W	YCR001W	NPP1	P25353	742 aa		4.83	□□□□□ -1.64
YCR001W	YCR001W	AAR2	P32357	355 aa	Predicted RBP	4.83	□□□□□ -1.64
YCR001W	YCR001W	STE14	P32584	239 aa		4.83	□□□□□ -1.64
YCR001W	YCR001W	YPT53	P36019	220 aa		4.83	□□□□□ -1.64
YCR001W	YCR001W	SVF1	Q05515	481 aa		4.83	□□□□□ -1.64
YCR001W	YCR001W	ERG4	P25340	473 aa		4.82	□□□□□ -1.64
YCR001W	YCR001W	KTR4	P38131	464 aa		4.82	□□□□□ -1.64
YCR001W	YCR001W	YKE2	P52553	114 aa		4.82	□□□□□ -1.64
YCR001W	YCR001W	SSL1	Q04673	461 aa	Predicted RBP	4.82	□□□□□ -1.64
YCR001W	YCR001W	TRP4	P07285	380 aa	Predicted RBP	4.81	□□□□□ -1.64
YCR001W	YCR001W	STE13	P33894	931 aa		4.81	□□□□□ -1.64
YCR001W	YCR001W	MRP8	P35719	219 aa		4.81	□□□□□ -1.64
YCR001W	YCR001W	YRO2	P38079	344 aa		4.81	□□□□□ -1.64
YCR001W	YCR001W	YBR238C	P38330	731 aa	Known RBP	4.81	□□□□□ -1.64
YCR001W	YCR001W	AFR1	P33304	620 aa		4.8	□□□□□ -1.64
YCR001W	YCR001W	PBY1	P38254	753 aa		4.8	□□□□□ -1.64
YCR001W	YCR001W	SLU7	Q02775	382 aa	Known RBP	4.8	□□□□□ -1.64
YCR001W	YCR001W	VPS30	Q02948	557 aa		4.8	□□□□□ -1.64
YCR001W	YCR001W	RPD3	P32561	433 aa		4.79	□□□□□ -1.64
YCR001W	YCR001W	VAC8	P39968	578 aa		4.79	□□□□□ -1.64
YCR001W	YCR001W	YMR206W	Q03695	313 aa		4.79	□□□□□ -1.64
YCR001W	YCR001W	IRR1	P40541	1150 aa		4.78	□□□□□ -1.64
YCR001W	YCR001W	TPO2	P53283	614 aa		4.78	□□□□□ -1.64
YCR001W	YCR001W	RNT1	Q02555	471 aa		4.78	□□□□□ -1.64
YCR001W	YCR001W	PEX19	Q07418	342 aa		4.78	□□□□□ -1.64
YCR001W	YCR001W	SEC21	P32074	935 aa	Known RBP	4.77	□□□□□ -1.65
YCR001W	YCR001W	SIT1	P39980	628 aa		4.77	□□□□□ -1.65
YCR001W	YCR001W	YIL108W	P40483	696 aa	Known RBP	4.77	□□□□□ -1.65
YCR001W	YCR001W	STB4	P50104	949 aa		4.77	□□□□□ -1.65
YCR001W	YCR001W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
YCR001W	YCR001W	YML122C	Q03207	126 aa		4.77	□□□□□ -1.65
YCR001W	YCR001W	MCH5	Q08777	521 aa		4.77	□□□□□ -1.65
YCR001W	YCR001W	TRM13	Q12383	476 aa		4.77	□□□□□ -1.65
YCR001W	YCR001W	FBP1	P09201	348 aa		4.76	□□□□□ -1.65
YCR001W	YCR001W	RFA1	P22336	621 aa	Known RBP	4.76	□□□□□ -1.65
YCR001W	YCR001W	STE5	P32917	917 aa		4.76	□□□□□ -1.65
YCR001W	YCR001W	ERT1	P38140	529 aa		4.76	□□□□□ -1.65
YCR001W	YCR001W	SDP1	P40479	209 aa		4.76	□□□□□ -1.65
YCR001W	YCR001W	ALD6	P54115	500 aa	Known RBP	4.76	□□□□□ -1.65
YCR001W	YCR001W	ERG5	P54781	538 aa		4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 46 ms