RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W CTF18P49956 741 aa6.45□□□□□ -1.38
SHM1YBR263W ROM1P53046 1155 aa6.45□□□□□ -1.38
SHM1YBR263W YNR040WP53736 256 aa6.45□□□□□ -1.38
SHM1YBR263W YPL034WQ03083 165 aa6.45□□□□□ -1.38
SHM1YBR263W YLR407WQ06070 228 aa6.45□□□□□ -1.38
SHM1YBR263W RAD18P10862 487 aa6.44□□□□□ -1.38
SHM1YBR263W SWI4P25302 1093 aaKnown RBP6.44□□□□□ -1.38
SHM1YBR263W PHO88P38264 188 aaPredicted RBP6.44□□□□□ -1.38
SHM1YBR263W BUD9P53226 547 aa6.44□□□□□ -1.38
SHM1YBR263W VPS20Q04272 221 aa6.44□□□□□ -1.38
SHM1YBR263W HCA4P20448 770 aaKnown RBP6.43□□□□□ -1.38
SHM1YBR263W NAR1P23503 491 aaKnown RBP6.43□□□□□ -1.38
SHM1YBR263W BMH2P34730 273 aaKnown RBP6.43□□□□□ -1.38
SHM1YBR263W OPY1P38271 328 aa6.43□□□□□ -1.38
SHM1YBR263W YHL017WP38745 532 aa6.43□□□□□ -1.38
SHM1YBR263W TOM71P38825 639 aaKnown RBP6.43□□□□□ -1.38
SHM1YBR263W NPA3P47122 385 aa6.43□□□□□ -1.38
SHM1YBR263W ENT3P47160 408 aa6.43□□□□□ -1.38
SHM1YBR263W MET6P05694 767 aaKnown RBP6.42□□□□□ -1.38
SHM1YBR263W RPL19AP0CX82 189 aaKnown RBP6.42□□□□□ -1.38
SHM1YBR263W RPL19BP0CX83 189 aaPredicted RBP6.42□□□□□ -1.38
SHM1YBR263W PCT1P13259 424 aa6.42□□□□□ -1.38
SHM1YBR263W STI1P15705 589 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
SHM1YBR263W CDC60P26637 1090 aaKnown RBP6.42□□□□□ -1.38
SHM1YBR263W TGL1P34163 548 aa6.42□□□□□ -1.38
SHM1YBR263W RXT2P38255 430 aa6.42□□□□□ -1.38
SHM1YBR263W APM2P38700 605 aa6.42□□□□□ -1.38
SHM1YBR263W RPN10P38886 268 aaKnown RBP6.42□□□□□ -1.38
SHM1YBR263W PCI8P40512 444 aa6.42□□□□□ -1.38
SHM1YBR263W ALD6P54115 500 aaKnown RBP6.42□□□□□ -1.38
SHM1YBR263W GIS4Q04233 774 aa6.42□□□□□ -1.38
SHM1YBR263W TMA64Q04600 565 aaKnown RBP6.42□□□□□ -1.38
SHM1YBR263W YDR341CQ05506 607 aaKnown RBP6.42□□□□□ -1.38
SHM1YBR263W SAM1P10659 382 aaKnown RBP6.41□□□□□ -1.38
SHM1YBR263W VMA2P16140 517 aaKnown RBP6.41□□□□□ -1.38
SHM1YBR263W CBP3P21560 335 aa6.41□□□□□ -1.38
SHM1YBR263W NDT80P38830 627 aa6.41□□□□□ -1.38
SHM1YBR263W ASE1P50275 885 aa6.41□□□□□ -1.38
SHM1YBR263W LSB1P53281 241 aa6.41□□□□□ -1.38
SHM1YBR263W YLR225CQ05948 407 aaKnown RBP6.41□□□□□ -1.38
SHM1YBR263W PSK2Q08217 1101 aa6.41□□□□□ -1.38
SHM1YBR263W CIT1P00890 479 aa6.41□□□□□ -1.38
SHM1YBR263W CDC6P09119 513 aa6.41□□□□□ -1.38
SHM1YBR263W VPS1P21576 704 aaKnown RBP6.41□□□□□ -1.38
SHM1YBR263W EUG1P32474 517 aa6.41□□□□□ -1.38
SHM1YBR263W UTR4P32626 227 aa6.41□□□□□ -1.38
SHM1YBR263W GPB2P39717 880 aa6.41□□□□□ -1.38
SHM1YBR263W BUD6P41697 788 aa6.41□□□□□ -1.38
SHM1YBR263W NCS6P53088 359 aa6.41□□□□□ -1.38
SHM1YBR263W GDE1Q02979 1223 aa6.41□□□□□ -1.38
SHM1YBR263W SGD1Q06132 899 aa6.41□□□□□ -1.38
SHM1YBR263W VIP1Q06685 1146 aaKnown RBP6.41□□□□□ -1.38
SHM1YBR263W ELG1Q12050 791 aa6.41□□□□□ -1.38
SHM1YBR263W YPL150WQ12152 901 aa6.41□□□□□ -1.38
SHM1YBR263W CPA2P03965 1118 aaKnown RBP6.4□□□□□ -1.39
SHM1YBR263W PHR1P05066 565 aaKnown RBP RIP-Chip data6.4□□□□□ -1.39not detected
SHM1YBR263W RPL8AP17076 256 aaKnown RBP6.4□□□□□ -1.39
SHM1YBR263W SEC20P28791 383 aa6.4□□□□□ -1.39
SHM1YBR263W SHP1P34223 423 aa6.4□□□□□ -1.39
SHM1YBR263W FMS1P50264 508 aa6.4□□□□□ -1.39
SHM1YBR263W YGL138CP53122 345 aa6.4□□□□□ -1.39
SHM1YBR263W SPH1Q06160 661 aa6.4□□□□□ -1.39
SHM1YBR263W TY3A-GQ12173 290 aa6.4□□□□□ -1.39
SHM1YBR263W TY3A-IQ99219 290 aa6.4□□□□□ -1.39
SHM1YBR263W HSP82P02829 709 aaKnown RBP6.39□□□□□ -1.39
SHM1YBR263W TTI1P36097 1038 aa6.39□□□□□ -1.39
SHM1YBR263W RFC5P38251 354 aa6.39□□□□□ -1.39
SHM1YBR263W CCT3P39077 534 aaKnown RBP6.39□□□□□ -1.39
SHM1YBR263W TPM2P40414 161 aa6.39□□□□□ -1.39
SHM1YBR263W QDR2P40474 542 aa6.39□□□□□ -1.39
SHM1YBR263W DUS3Q06053 668 aaKnown RBP6.39□□□□□ -1.39
SHM1YBR263W DUS4Q06063 367 aa6.39□□□□□ -1.39
SHM1YBR263W VAN1P23642 535 aa6.38□□□□□ -1.39
SHM1YBR263W UGA4P32837 571 aa6.38□□□□□ -1.39
SHM1YBR263W PRX1P34227 261 aaKnown RBP6.38□□□□□ -1.39
SHM1YBR263W MCR1P36060 302 aaKnown RBP6.38□□□□□ -1.39
SHM1YBR263W YKR018CP36114 725 aa6.38□□□□□ -1.39
SHM1YBR263W PAN5P38787 379 aa6.38□□□□□ -1.39
SHM1YBR263W CTR1P49573 406 aa6.38□□□□□ -1.39
SHM1YBR263W ATG1P53104 897 aa6.38□□□□□ -1.39
SHM1YBR263W LIF1P53150 421 aa6.38□□□□□ -1.39
SHM1YBR263W YGR125WP53273 1036 aa6.38□□□□□ -1.39
SHM1YBR263W YAF9P53930 226 aa6.38□□□□□ -1.39
SHM1YBR263W SMD2Q06217 110 aaKnown RBP6.38□□□□□ -1.39
SHM1YBR263W GUD1Q07729 489 aa6.38□□□□□ -1.39
SHM1YBR263W DCS2Q12123 353 aa6.38□□□□□ -1.39
SHM1YBR263W MRP10O75012 95 aa6.37□□□□□ -1.39
SHM1YBR263W BIK1P11709 440 aa6.37□□□□□ -1.39
SHM1YBR263W TGL4P36165 910 aa6.37□□□□□ -1.39
SHM1YBR263W MAL33P38157 468 aa6.37□□□□□ -1.39
SHM1YBR263W HRQ1Q05549 1077 aa6.37□□□□□ -1.39
SHM1YBR263W OXR1Q08952 273 aa6.37□□□□□ -1.39
SHM1YBR263W GET3Q12154 354 aaKnown RBP6.37□□□□□ -1.39
SHM1YBR263W CEX1Q12453 761 aa6.37□□□□□ -1.39
SHM1YBR263W MYO1P08964 1928 aa6.37□□□□□ -1.39
SHM1YBR263W AI3P03877 415 aa6.36□□□□□ -1.39
SHM1YBR263W MBR1P23493 339 aa6.36□□□□□ -1.39
SHM1YBR263W PWP2P25635 923 aaKnown RBP6.36□□□□□ -1.39
SHM1YBR263W ASF1P32447 279 aa6.36□□□□□ -1.39
SHM1YBR263W NAB2P32505 525 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms