RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 BICDL1Q6ZP65 573 aa21.37■■□□□ 1.01
SCARB2-213ENST00000638680 CTCFLQ8NI51 663 aaPredicted RBP21.37■■□□□ 1.01
SCARB2-213ENST00000638680 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.37■■□□□ 1.01
SCARB2-213ENST00000638680 MBIPQ9NS73 344 aa21.37■■□□□ 1.01
SCARB2-213ENST00000638680 DISP3Q9P2K9 1392 aa21.37■■□□□ 1.01
SCARB2-213ENST00000638680 IFIT3O14879 490 aaKnown RBP21.37■■□□□ 1.01
SCARB2-213ENST00000638680 ZC3H6P61129 1189 aaKnown RBP21.37■■□□□ 1.01
SCARB2-213ENST00000638680 GNG11P61952 73 aa21.36■■□□□ 1.01
SCARB2-213ENST00000638680 C8orf34Q49A92 452 aa21.36■■□□□ 1.01
SCARB2-213ENST00000638680 VPS36Q86VN1 386 aa21.36■■□□□ 1.01
SCARB2-213ENST00000638680 FAM107BQ9H098 131 aa21.36■■□□□ 1.01
SCARB2-213ENST00000638680 CCDC171Q6TFL3 1326 aa21.36■■□□□ 1.01
SCARB2-213ENST00000638680 CCDC12Q8WUD4 166 aaPredicted RBP21.36■■□□□ 1.01
SCARB2-213ENST00000638680 UBE2Q2Q8WVN8 375 aa21.36■■□□□ 1.01
SCARB2-213ENST00000638680 RANBP6O60518 1105 aaKnown RBP21.36■■□□□ 1.01
SCARB2-213ENST00000638680 USP48Q86UV5 1035 aa21.36■■□□□ 1.01
SCARB2-213ENST00000638680 USP16Q9Y5T5 823 aa21.35■■□□□ 1.01
SCARB2-213ENST00000638680 SDSP20132 328 aa21.35■■□□□ 1.01
SCARB2-213ENST00000638680 PCDHB15Q9Y5E8 787 aa21.35■■□□□ 1.01
SCARB2-213ENST00000638680 FGFR1OPO95684 399 aaKnown RBP21.35■■□□□ 1.01
SCARB2-213ENST00000638680 CCDC144CPQ8IYA2 1237 aa21.35■■□□□ 1.01
SCARB2-213ENST00000638680 NEK1Q96PY6 1258 aa21.35■■□□□ 1.01
SCARB2-213ENST00000638680 UBA5Q9GZZ9 404 aa21.35■■□□□ 1.01
SCARB2-213ENST00000638680 MPHOSPH10O00566 681 aaKnown RBP21.35■■□□□ 1.01
SCARB2-213ENST00000638680 MKNK2Q9HBH9 465 aa21.35■■□□□ 1.01
SCARB2-213ENST00000638680 RAPGEF3O95398 923 aa21.35■■□□□ 1.01
SCARB2-213ENST00000638680 CAVIN2O95810 425 aa21.35■■□□□ 1.01
SCARB2-213ENST00000638680 ANO6Q4KMQ2 910 aa21.35■■□□□ 1.01
SCARB2-213ENST00000638680 CCDC91Q7Z6B0 441 aa21.35■■□□□ 1.01
SCARB2-213ENST00000638680 ARHGEF11O15085 1522 aa21.34■■□□□ 1.01
SCARB2-213ENST00000638680 MAP3K12Q12852 859 aa21.34■■□□□ 1.01
SCARB2-213ENST00000638680 ALS2CR12Q96Q35 445 aa21.34■■□□□ 1.01
SCARB2-213ENST00000638680 PRDM11Q9NQV5 511 aa21.34■■□□□ 1.01
SCARB2-213ENST00000638680 STARD3NLO95772 234 aa21.34■■□□□ 1.01
SCARB2-213ENST00000638680 NLRP5P59047 1200 aa21.34■■□□□ 1.01
SCARB2-213ENST00000638680 ZFP91Q96JP5 570 aaPredicted RBP21.34■■□□□ 1.01
SCARB2-213ENST00000638680 MTIF2P46199 727 aaKnown RBP21.34■■□□□ 1.01
SCARB2-213ENST00000638680 NECAB1Q8N987 351 aa21.34■■□□□ 1.01
SCARB2-213ENST00000638680 PTCD1O75127 700 aaKnown RBP21.34■■□□□ 1.01
SCARB2-213ENST00000638680 KRT222Q8N1A0 295 aa21.34■■□□□ 1.01
SCARB2-213ENST00000638680 CETN2P41208 172 aa21.33■■□□□ 1.01
SCARB2-213ENST00000638680 TICAM2Q86XR7 235 aa21.33■■□□□ 1.01
SCARB2-213ENST00000638680 GOLIM4O00461 696 aa21.33■■□□□ 1.01
SCARB2-213ENST00000638680 RAB11FIP4Q86YS3 637 aa21.33■■□□□ 1.01
SCARB2-213ENST00000638680 POTEJP0CG39 1038 aa21.33■■□□□ 1.01
SCARB2-213ENST00000638680 LIG1P18858 919 aa21.33■■□□□ 1.01
SCARB2-213ENST00000638680 HLTFQ14527 1009 aaKnown RBP eCLIP21.33■■□□□ 1.01
SCARB2-213ENST00000638680 MPRIPQ6WCQ1 1025 aa21.33■■□□□ 1.01
SCARB2-213ENST00000638680 KCNH5Q8NCM2 988 aa21.33■■□□□ 1.01
SCARB2-213ENST00000638680 IFIT5Q13325 482 aaKnown RBP21.33■■□□□ 1
SCARB2-213ENST00000638680 PPP1R42Q7Z4L9 355 aa21.33■■□□□ 1
SCARB2-213ENST00000638680 ORC3Q9UBD5 711 aaPredicted RBP21.33■■□□□ 1
SCARB2-213ENST00000638680 ADGRF5Q8IZF2 1346 aa21.32■■□□□ 1
SCARB2-213ENST00000638680 IQCA1Q86XH1 822 aa21.32■■□□□ 1
SCARB2-213ENST00000638680 CCDC186Q7Z3E2 898 aa21.32■■□□□ 1
SCARB2-213ENST00000638680 ZNF287Q9HBT7 754 aa21.32■■□□□ 1
SCARB2-213ENST00000638680 DBF4Q9UBU7 674 aaPredicted RBP21.32■■□□□ 1
SCARB2-213ENST00000638680 MAP3K2Q9Y2U5 619 aa21.32■■□□□ 1
SCARB2-213ENST00000638680 CCDC194A0A1B0GVG4 234 aa21.32■■□□□ 1
SCARB2-213ENST00000638680 FAM83GA6ND36 823 aa21.32■■□□□ 1
SCARB2-213ENST00000638680 GCOM1H8Y6P7 765 aaPredicted RBP21.32■■□□□ 1
SCARB2-213ENST00000638680 MYZAPP0CAP1 466 aa21.32■■□□□ 1
SCARB2-213ENST00000638680 HYPKQ9NX55 129 aa21.32■■□□□ 1
SCARB2-213ENST00000638680 RPRD2Q5VT52 1461 aaKnown RBP21.32■■□□□ 1
SCARB2-213ENST00000638680 GSTTP1A0A1W2PQM5 241 aa21.31■■□□□ 1
SCARB2-213ENST00000638680 IARSP41252 1262 aaKnown RBP21.31■■□□□ 1
SCARB2-213ENST00000638680 CAVIN4Q5BKX8 364 aa21.31■■□□□ 1
SCARB2-213ENST00000638680 TOPBP1Q92547 1522 aa21.31■■□□□ 1
SCARB2-213ENST00000638680 NAA15Q9BXJ9 866 aaKnown RBP21.31■■□□□ 1
SCARB2-213ENST00000638680 ZSCAN16Q9H4T2 348 aaPredicted RBP21.31■■□□□ 1
SCARB2-213ENST00000638680 SKILP12757 684 aa21.31■■□□□ 1
SCARB2-213ENST00000638680 CCDC102BQ68D86 513 aa21.31■■□□□ 1
SCARB2-213ENST00000638680 SPECC1Q5M775 1068 aa21.31■■□□□ 1
SCARB2-213ENST00000638680 HMG20BQ9P0W2 317 aa21.31■■□□□ 1
SCARB2-213ENST00000638680 ZKSCAN5Q9Y2L8 839 aa21.31■■□□□ 1
SCARB2-213ENST00000638680 DESP17661 470 aa21.31■■□□□ 1
SCARB2-213ENST00000638680 HAND2P61296 217 aa21.3■■□□□ 1
SCARB2-213ENST00000638680 SMC1AQ14683 1233 aaKnown RBP21.3■■□□□ 1
SCARB2-213ENST00000638680 TMEM266Q2M3C6 531 aa21.3■■□□□ 1
SCARB2-213ENST00000638680 KRI1Q8N9T8 703 aaKnown RBP21.3■■□□□ 1
SCARB2-213ENST00000638680 JADE2Q9NQC1 790 aa21.3■■□□□ 1
SCARB2-213ENST00000638680 SCAF11Q99590 1463 aaKnown RBP21.3■■□□□ 1
SCARB2-213ENST00000638680 IL16Q14005 1332 aa21.3■■□□□ 1
SCARB2-213ENST00000638680 GPATCH11Q8N954 259 aa21.3■■□□□ 1
SCARB2-213ENST00000638680 TIGD1Q96MW7 591 aa21.3■■□□□ 1
SCARB2-213ENST00000638680 RNF41Q9H4P4 317 aaPredicted RBP21.3■■□□□ 1
SCARB2-213ENST00000638680 FAM135AQ9P2D6 1515 aa21.3■■□□□ 1
SCARB2-213ENST00000638680 SNX21Q969T3 373 aa21.3■■□□□ 1
SCARB2-213ENST00000638680 RAB34Q9BZG1 259 aa21.3■■□□□ 1
SCARB2-213ENST00000638680 SNAPC4Q5SXM2 1469 aa21.3■■□□□ 1
SCARB2-213ENST00000638680 MAATS1Q7Z4T9 603 aa21.3■■□□□ 1
SCARB2-213ENST00000638680 A0A087WZG4 1122 aa21.29■■□□□ 1
SCARB2-213ENST00000638680 PRIM1P49642 420 aaKnown RBP21.29■■□□□ 1
SCARB2-213ENST00000638680 AMOTQ4VCS5 1084 aa21.29■■□□□ 1
SCARB2-213ENST00000638680 UBASH3AP57075 661 aa21.29■■□□□ 1
SCARB2-213ENST00000638680 CATIPQ7Z7H3 387 aa21.29■■□□□ 1
SCARB2-213ENST00000638680 CTNNBL1Q8WYA6 563 aaPredicted RBP21.29■■□□□ 1
SCARB2-213ENST00000638680 NESP48681 1621 aa21.29■■□□□ 1
SCARB2-213ENST00000638680 TMEM67Q5HYA8 995 aa21.29■■□□□ 1
SCARB2-213ENST00000638680 FAM200AQ8TCP9 573 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms