RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 C7orf43Q8WVR3 580 aa10.39□□□□□ -0.75
PNKP-229ENST00000637897 BRIP1Q9BX63 1249 aa10.39□□□□□ -0.75
PNKP-229ENST00000637897 GPBP1L1Q9HC44 474 aaPredicted RBP10.39□□□□□ -0.75
PNKP-229ENST00000637897 ADAMTS8Q9UP79 889 aa10.39□□□□□ -0.75
PNKP-229ENST00000637897 TNRC6CQ9HCJ0 1690 aaKnown RBP10.38□□□□□ -0.75
PNKP-229ENST00000637897 KLRG2A4D1S0 409 aaPredicted RBP10.38□□□□□ -0.75
PNKP-229ENST00000637897 RIPK4P57078 832 aa10.38□□□□□ -0.75
PNKP-229ENST00000637897 FER1L6Q2WGJ9 1857 aa10.38□□□□□ -0.75
PNKP-229ENST00000637897 CCDC88AQ3V6T2 1871 aa10.38□□□□□ -0.75
PNKP-229ENST00000637897 NUP98P52948 1817 aa10.37□□□□□ -0.75
PNKP-229ENST00000637897 UBN2Q6ZU65 1347 aa10.37□□□□□ -0.75
PNKP-229ENST00000637897 ANXA1P04083 346 aa10.37□□□□□ -0.75
PNKP-229ENST00000637897 SRGNP10124 158 aa10.37□□□□□ -0.75
PNKP-229ENST00000637897 OLFM4Q6UX06 510 aa10.37□□□□□ -0.75
PNKP-229ENST00000637897 CLEC4GQ6UXB4 293 aa10.37□□□□□ -0.75
PNKP-229ENST00000637897 TTLL6Q8N841 843 aa10.37□□□□□ -0.75
PNKP-229ENST00000637897 SNED1Q8TER0 1413 aa10.37□□□□□ -0.75
PNKP-229ENST00000637897 ABCC12Q96J65 1359 aa10.37□□□□□ -0.75
PNKP-229ENST00000637897 POTECB2RU33 542 aa10.36□□□□□ -0.75
PNKP-229ENST00000637897 NGEFQ8N5V2 710 aa10.36□□□□□ -0.75
PNKP-229ENST00000637897 CNBD1Q8NA66 436 aa10.36□□□□□ -0.75
PNKP-229ENST00000637897 SETDB2Q96T68 719 aa10.36□□□□□ -0.75
PNKP-229ENST00000637897 RNF181Q9P0P0 153 aa10.36□□□□□ -0.75
PNKP-229ENST00000637897 ARFGEF2Q9Y6D5 1785 aa10.35□□□□□ -0.75
PNKP-229ENST00000637897 H0YIN7 160 aa10.35□□□□□ -0.75
PNKP-229ENST00000637897 CHL1O00533 1208 aa10.35□□□□□ -0.75
PNKP-229ENST00000637897 RGL2O15211 777 aa10.35□□□□□ -0.75
PNKP-229ENST00000637897 C21orf2O43822 256 aa10.35□□□□□ -0.75
PNKP-229ENST00000637897 C3orf67Q6ZVT6 689 aa10.35□□□□□ -0.75
PNKP-229ENST00000637897 PNISRQ8TF01 805 aaKnown RBP10.35□□□□□ -0.75
PNKP-229ENST00000637897 NIP7Q9Y221 180 aaKnown RBP eCLIP10.35□□□□□ -0.75
PNKP-229ENST00000637897 CACNA1SQ13698 1873 aa10.35□□□□□ -0.75
PNKP-229ENST00000637897 MAP3K15Q6ZN16 1313 aa10.34□□□□□ -0.75
PNKP-229ENST00000637897 MAPK8IP3Q9UPT6 1336 aa10.34□□□□□ -0.75
PNKP-229ENST00000637897 MYL6BP14649 208 aa10.34□□□□□ -0.75
PNKP-229ENST00000637897 NEUROD2Q15784 382 aa10.34□□□□□ -0.75
PNKP-229ENST00000637897 SUSD4Q5VX71 490 aa10.34□□□□□ -0.75
PNKP-229ENST00000637897 NUTM1Q86Y26 1132 aa10.34□□□□□ -0.75
PNKP-229ENST00000637897 ZNF34Q8IZ26 560 aa10.34□□□□□ -0.75
PNKP-229ENST00000637897 ZNF622Q969S3 477 aaKnown RBP eCLIP10.34□□□□□ -0.75
PNKP-229ENST00000637897 ZNF219Q9P2Y4 722 aaPredicted RBP10.34□□□□□ -0.75
PNKP-229ENST00000637897 TSPYL4Q9UJ04 414 aa10.34□□□□□ -0.75
PNKP-229ENST00000637897 FAM177BA6PVY3 158 aa10.33□□□□□ -0.76
PNKP-229ENST00000637897 ERVV-1B6SEH8 477 aa10.33□□□□□ -0.76
PNKP-229ENST00000637897 ZNF853P0CG23 659 aa10.33□□□□□ -0.76
PNKP-229ENST00000637897 LMNB1P20700 586 aa10.33□□□□□ -0.76
PNKP-229ENST00000637897 PDE6BP35913 854 aa10.33□□□□□ -0.76
PNKP-229ENST00000637897 ERFEQ4G0M1 354 aa10.33□□□□□ -0.76
PNKP-229ENST00000637897 STYK1Q6J9G0 422 aa10.33□□□□□ -0.76
PNKP-229ENST00000637897 PRPF40BQ6NWY9 871 aaKnown RBP10.33□□□□□ -0.76
PNKP-229ENST00000637897 NBPF5PQ86XG9 351 aaPredicted RBP10.33□□□□□ -0.76
PNKP-229ENST00000637897 RUNDC1Q96C34 613 aa10.33□□□□□ -0.76
PNKP-229ENST00000637897 ZBTB3Q9H5J0 574 aa10.33□□□□□ -0.76
PNKP-229ENST00000637897 DICER1Q9UPY3 1922 aaKnown RBP10.33□□□□□ -0.76
PNKP-229ENST00000637897 TIAM2Q8IVF5 1701 aa10.33□□□□□ -0.76
PNKP-229ENST00000637897 COL4A5P29400 1685 aa10.32□□□□□ -0.76
PNKP-229ENST00000637897 NTSR2O95665 410 aa10.32□□□□□ -0.76
PNKP-229ENST00000637897 HSPA6P17066 643 aa10.32□□□□□ -0.76
PNKP-229ENST00000637897 EIF2S2P20042 333 aaKnown RBP10.32□□□□□ -0.76
PNKP-229ENST00000637897 GPTP24298 496 aa10.32□□□□□ -0.76
PNKP-229ENST00000637897 CRY2Q49AN0 593 aa10.32□□□□□ -0.76
PNKP-229ENST00000637897 MIER1Q8N108 512 aa10.32□□□□□ -0.76
PNKP-229ENST00000637897 SYNE4Q8N205 404 aa10.32□□□□□ -0.76
PNKP-229ENST00000637897 MASTLQ96GX5 879 aa10.32□□□□□ -0.76
PNKP-229ENST00000637897 RRAGCQ9HB90 399 aa10.32□□□□□ -0.76
PNKP-229ENST00000637897 BABAM1Q9NWV8 329 aa10.32□□□□□ -0.76
PNKP-229ENST00000637897 COL4A1P02462 1669 aa10.31□□□□□ -0.76
PNKP-229ENST00000637897 APAF1O14727 1248 aa10.31□□□□□ -0.76
PNKP-229ENST00000637897 GIGYF2Q6Y7W6 1299 aaKnown RBP10.31□□□□□ -0.76
PNKP-229ENST00000637897 DNAJC5GQ8N7S2 189 aa10.31□□□□□ -0.76
PNKP-229ENST00000637897 NECTIN2Q92692 538 aa10.31□□□□□ -0.76
PNKP-229ENST00000637897 PNNQ9H307 717 aaKnown RBP10.31□□□□□ -0.76
PNKP-229ENST00000637897 ERBB4Q15303 1308 aa10.31□□□□□ -0.76
PNKP-229ENST00000637897 LTBP3Q9NS15 1303 aa10.31□□□□□ -0.76
PNKP-229ENST00000637897 GLTPD2A6NH11 291 aa10.3□□□□□ -0.76
PNKP-229ENST00000637897 TOMM70O94826 608 aa10.3□□□□□ -0.76
PNKP-229ENST00000637897 NEFMP07197 916 aa10.3□□□□□ -0.76
PNKP-229ENST00000637897 ST5P78524 1137 aa10.3□□□□□ -0.76
PNKP-229ENST00000637897 HTRA3P83110 453 aa10.3□□□□□ -0.76
PNKP-229ENST00000637897 TPTE2Q6XPS3 522 aa10.3□□□□□ -0.76
PNKP-229ENST00000637897 CNKSR1Q969H4 720 aa10.3□□□□□ -0.76
PNKP-229ENST00000637897 MBIPQ9NS73 344 aa10.3□□□□□ -0.76
PNKP-229ENST00000637897 PDZRN3Q9UPQ7 1066 aa10.3□□□□□ -0.76
PNKP-229ENST00000637897 ZNF652Q9Y2D9 606 aa10.3□□□□□ -0.76
PNKP-229ENST00000637897 NPR1P16066 1061 aa10.29□□□□□ -0.76
PNKP-229ENST00000637897 COPS6Q7L5N1 327 aa10.29□□□□□ -0.76
PNKP-229ENST00000637897 XAGE3Q8WTP9 111 aa10.29□□□□□ -0.76
PNKP-229ENST00000637897 ZNF428Q96B54 188 aa10.29□□□□□ -0.76
PNKP-229ENST00000637897 CHPF2Q9P2E5 772 aa10.29□□□□□ -0.76
PNKP-229ENST00000637897 RIC1Q4ADV7 1423 aa10.29□□□□□ -0.76
PNKP-229ENST00000637897 WDR90Q96KV7 1748 aa10.29□□□□□ -0.76
PNKP-229ENST00000637897 ZC3H4Q9UPT8 1303 aaKnown RBP10.29□□□□□ -0.76
PNKP-229ENST00000637897 IBTKQ9P2D0 1353 aaPredicted RBP10.28□□□□□ -0.76
PNKP-229ENST00000637897 POTEIP0CG38 1075 aa10.28□□□□□ -0.76
PNKP-229ENST00000637897 POTEJP0CG39 1038 aa10.28□□□□□ -0.76
PNKP-229ENST00000637897 HOXA10P31260 410 aaPredicted RBP10.28□□□□□ -0.76
PNKP-229ENST00000637897 RBM46Q8TBY0 533 aaKnown RBP10.28□□□□□ -0.76
PNKP-229ENST00000637897 CFAP44Q96MT7 982 aa10.28□□□□□ -0.76
PNKP-229ENST00000637897 DDX21Q9NR30 783 aaKnown RBP eCLIP10.28□□□□□ -0.76
PNKP-229ENST00000637897 TAF1P21675 1872 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms