RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 SYNJ1O43426 1573 aa6.06□□□□□ -1.44
SDCBP-213ENST00000630925 CDC27P30260 824 aa6.06□□□□□ -1.44
SDCBP-213ENST00000630925 CTHP32929 405 aa6.06□□□□□ -1.44
SDCBP-213ENST00000630925 TIE1P35590 1138 aa6.06□□□□□ -1.44
SDCBP-213ENST00000630925 NBPF9Q3BBW0 867 aa6.06□□□□□ -1.44
SDCBP-213ENST00000630925 RSPH1Q8WYR4 309 aa6.06□□□□□ -1.44
SDCBP-213ENST00000630925 RETREG1Q9H6L5 497 aa6.06□□□□□ -1.44
SDCBP-213ENST00000630925 INTUQ9ULD6 942 aa6.06□□□□□ -1.44
SDCBP-213ENST00000630925 ABCC10Q5T3U5 1492 aa6.06□□□□□ -1.44
SDCBP-213ENST00000630925 NR1I2O75469 434 aa6.05□□□□□ -1.44
SDCBP-213ENST00000630925 RNASEH2AO75792 299 aaKnown RBP6.05□□□□□ -1.44
SDCBP-213ENST00000630925 SEC24BO95487 1268 aa6.05□□□□□ -1.44
SDCBP-213ENST00000630925 CCDC93Q567U6 631 aa6.05□□□□□ -1.44
SDCBP-213ENST00000630925 KRT77Q7Z794 578 aa6.05□□□□□ -1.44
SDCBP-213ENST00000630925 FAM200AQ8TCP9 573 aa6.05□□□□□ -1.44
SDCBP-213ENST00000630925 DDX12PQ92771 950 aa6.05□□□□□ -1.44
SDCBP-213ENST00000630925 KANSL2Q9H9L4 492 aa6.05□□□□□ -1.44
SDCBP-213ENST00000630925 ZNF69Q9UC07 566 aa6.05□□□□□ -1.44
SDCBP-213ENST00000630925 DDX41Q9UJV9 622 aaKnown RBP6.05□□□□□ -1.44
SDCBP-213ENST00000630925 HDAC5Q9UQL6 1122 aa6.05□□□□□ -1.44
SDCBP-213ENST00000630925 MYL1P05976 194 aa6.05□□□□□ -1.44
SDCBP-213ENST00000630925 SRGNP10124 158 aa6.05□□□□□ -1.44
SDCBP-213ENST00000630925 TRAPPC10P48553 1259 aa6.05□□□□□ -1.44
SDCBP-213ENST00000630925 FMR1Q06787 632 aaKnown RBP eCLIP6.05□□□□□ -1.44
SDCBP-213ENST00000630925 NEXNQ0ZGT2 675 aa6.05□□□□□ -1.44
SDCBP-213ENST00000630925 ALDH1L2Q3SY69 923 aa6.05□□□□□ -1.44
SDCBP-213ENST00000630925 ZNF394Q53GI3 561 aa6.05□□□□□ -1.44
SDCBP-213ENST00000630925 BRDTQ58F21 947 aaPredicted RBP6.05□□□□□ -1.44
SDCBP-213ENST00000630925 NBPF6Q5VWK0 638 aa6.05□□□□□ -1.44
SDCBP-213ENST00000630925 METTL3Q86U44 580 aaKnown RBP6.05□□□□□ -1.44
SDCBP-213ENST00000630925 ZSCAN30Q86W11 494 aa6.05□□□□□ -1.44
SDCBP-213ENST00000630925 EGFL6Q8IUX8 553 aa6.05□□□□□ -1.44
SDCBP-213ENST00000630925 NBPF4Q96M43 638 aa6.05□□□□□ -1.44
SDCBP-213ENST00000630925 SLKQ9H2G2 1235 aaPredicted RBP6.05□□□□□ -1.44
SDCBP-213ENST00000630925 SYNPO2Q9UMS6 1093 aa6.05□□□□□ -1.44
SDCBP-213ENST00000630925 DIP2BQ9P265 1576 aa6.04□□□□□ -1.44
SDCBP-213ENST00000630925 SORBS3O60504 671 aa6.04□□□□□ -1.44
SDCBP-213ENST00000630925 CDC45O75419 566 aa6.04□□□□□ -1.44
SDCBP-213ENST00000630925 CT47B1P0C2W7 299 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-213ENST00000630925 CDKN1CP49918 316 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-213ENST00000630925 DAB2P98082 770 aa6.04□□□□□ -1.44
SDCBP-213ENST00000630925 CDC37Q16543 378 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-213ENST00000630925 SWI5Q1ZZU3 235 aa6.04□□□□□ -1.44
SDCBP-213ENST00000630925 MRS2Q9HD23 443 aa6.04□□□□□ -1.44
SDCBP-213ENST00000630925 SLC45A1Q9Y2W3 748 aa6.04□□□□□ -1.44
SDCBP-213ENST00000630925 PCDHB15Q9Y5E8 787 aa6.04□□□□□ -1.44
SDCBP-213ENST00000630925 EMILIN1Q9Y6C2 1016 aa6.04□□□□□ -1.44
SDCBP-213ENST00000630925 TARBP1Q13395 1621 aaKnown RBP6.04□□□□□ -1.44
SDCBP-213ENST00000630925 DYTNA2CJ06 578 aa6.03□□□□□ -1.44
SDCBP-213ENST00000630925 NPHP1O15259 732 aa6.03□□□□□ -1.44
SDCBP-213ENST00000630925 RRM1P23921 792 aa6.03□□□□□ -1.44
SDCBP-213ENST00000630925 MASP1P48740 699 aa6.03□□□□□ -1.44
SDCBP-213ENST00000630925 CNGB1Q14028 1251 aaPredicted RBP6.03□□□□□ -1.44
SDCBP-213ENST00000630925 PPP2R5AQ15172 486 aa6.03□□□□□ -1.44
SDCBP-213ENST00000630925 ACBD5Q5T8D3 534 aaPredicted RBP6.03□□□□□ -1.44
SDCBP-213ENST00000630925 KIAA0907Q7Z7F0 614 aaPredicted RBP6.03□□□□□ -1.44
SDCBP-213ENST00000630925 PLEKHM2Q8IWE5 1019 aa6.03□□□□□ -1.44
SDCBP-213ENST00000630925 TEX19Q8NA77 164 aa6.03□□□□□ -1.44
SDCBP-213ENST00000630925 ERP27Q96DN0 273 aa6.03□□□□□ -1.44
SDCBP-213ENST00000630925 DUSP9Q99956 384 aaKnown RBP6.03□□□□□ -1.44
SDCBP-213ENST00000630925 ALDH8A1Q9H2A2 487 aaPredicted RBP6.03□□□□□ -1.44
SDCBP-213ENST00000630925 FANCLQ9NW38 375 aa6.03□□□□□ -1.44
SDCBP-213ENST00000630925 CNTN3Q9P232 1028 aa6.03□□□□□ -1.44
SDCBP-213ENST00000630925 ASAP1Q9ULH1 1129 aa6.03□□□□□ -1.44
SDCBP-213ENST00000630925 MRPS23Q9Y3D9 190 aaKnown RBP6.03□□□□□ -1.44
SDCBP-213ENST00000630925 PCDHGB7Q9Y5F8 929 aa6.03□□□□□ -1.44
SDCBP-213ENST00000630925 SEC13P55735 322 aa6.03□□□□□ -1.44
SDCBP-213ENST00000630925 LRRC41Q15345 812 aa6.03□□□□□ -1.44
SDCBP-213ENST00000630925 PPP4R4Q6NUP7 873 aa6.03□□□□□ -1.44
SDCBP-213ENST00000630925 PDXDC1Q6P996 788 aa6.03□□□□□ -1.44
SDCBP-213ENST00000630925 TMC7Q7Z402 723 aa6.03□□□□□ -1.44
SDCBP-213ENST00000630925 CCDC89Q8N998 374 aa6.03□□□□□ -1.44
SDCBP-213ENST00000630925 MYRIPQ8NFW9 859 aa6.03□□□□□ -1.44
SDCBP-213ENST00000630925 YTHDC1Q96MU7 727 aaKnown RBP6.03□□□□□ -1.44
SDCBP-213ENST00000630925 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.03□□□□□ -1.44
SDCBP-213ENST00000630925 PPCSQ9HAB8 311 aa6.03□□□□□ -1.44
SDCBP-213ENST00000630925 PTPRHQ9HD43 1115 aa6.03□□□□□ -1.44
SDCBP-213ENST00000630925 DIS3Q9Y2L1 958 aaKnown RBP6.03□□□□□ -1.44
SDCBP-213ENST00000630925 HCLS1P14317 486 aaPredicted RBP6.02□□□□□ -1.45
SDCBP-213ENST00000630925 ATF4P18848 351 aaPredicted RBP6.02□□□□□ -1.45
SDCBP-213ENST00000630925 ARSHQ5FYA8 562 aa6.02□□□□□ -1.45
SDCBP-213ENST00000630925 IER5LQ5T953 404 aa6.02□□□□□ -1.45
SDCBP-213ENST00000630925 ANKRD23Q86SG2 305 aa6.02□□□□□ -1.45
SDCBP-213ENST00000630925 CKAP2LQ8IYA6 745 aa6.02□□□□□ -1.45
SDCBP-213ENST00000630925 IFNL3Q8IZI9 196 aa6.02□□□□□ -1.45
SDCBP-213ENST00000630925 MYCBPQ99417 103 aaPredicted RBP6.02□□□□□ -1.45
SDCBP-213ENST00000630925 SEZ6LQ9BYH1 1024 aa6.02□□□□□ -1.45
SDCBP-213ENST00000630925 CDHR5Q9HBB8 845 aa6.02□□□□□ -1.45
SDCBP-213ENST00000630925 BMP2KQ9NSY1 1161 aaPredicted RBP6.02□□□□□ -1.45
SDCBP-213ENST00000630925 CLIC5Q9NZA1 410 aa6.02□□□□□ -1.45
SDCBP-213ENST00000630925 VTI1BQ9UEU0 232 aa6.02□□□□□ -1.45
SDCBP-213ENST00000630925 POLG2Q9UHN1 485 aa6.02□□□□□ -1.45
SDCBP-213ENST00000630925 PPP2R3BQ9Y5P8 575 aa6.02□□□□□ -1.45
SDCBP-213ENST00000630925 SETD1BQ9UPS6 1966 aaKnown RBP6.02□□□□□ -1.45
SDCBP-213ENST00000630925 POTEFA5A3E0 1075 aa6.02□□□□□ -1.45
SDCBP-213ENST00000630925 MOXD2PA6NHM9 499 aa6.02□□□□□ -1.45
SDCBP-213ENST00000630925 MAP3K7O43318 606 aa6.02□□□□□ -1.45
SDCBP-213ENST00000630925 PRPF40AO75400 957 aaKnown RBP6.02□□□□□ -1.45
SDCBP-213ENST00000630925 RBP3P10745 1247 aa6.02□□□□□ -1.45
SDCBP-213ENST00000630925 MTA1Q13330 715 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms